[REL - 10amd64-default][biology/embassy] Failed for embassy-6.2.0_2 in build

2014-06-27 Thread pkg-fallout-builder 
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: w...@freebsd.org
Last committer: b...@freebsd.org
Ident:  $FreeBSD: head/biology/embassy/Makefile 359138 2014-06-24 
22:02:32Z bapt $
Log URL:
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-06-26_17h01m44s/logs/embassy-6.2.0_2.log
Build URL:  
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-06-26_17h01m44s
Log:

 Building biology/embassy
build started at Fri Jun 27 06:06:07 UTC 2014
port directory: /usr/ports/biology/embassy
building for: FreeBSD 10amd64-default-job-01 10.0-RELEASE-p3 FreeBSD 
10.0-RELEASE-p3 amd64
maintained by: w...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/embassy/Makefile 359138 2014-06-24 
22:02:32Z bapt $
Poudriere version: 3.1-pre
Host OSVERSION: 1100022
Jail OSVERSION: 1000510

---Begin Environment---
OSVERSION=1000510
UNAME_v=FreeBSD 10.0-RELEASE-p3
UNAME_r=10.0-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/build/10amd64-default/ref
PKG_EXT=txz
tpid=69309
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=embassy-6.2.0_2
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
OLDPWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/rdeps
PWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/pool
MASTERNAME=10amd64-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
=== The following configuration options are available for embassy-6.2.0_2:
 CBSTOOLS=on: CBS Tools
 DOMAINATRIX=on: Protein domain apps
 DOMALIGN=on: Protein domain apps
 DOMSEARCH=on: Protein domain apps
 EMNU=on: EMBOSS simple menu
 ESIM4=on: Align cDNA/EST to genome
 HMMER=on: HMM alignment and searches
 IPRSCAN=on: InterPro scan
 MEMENEW=on: Motif detection
 MIRA=on: Whole Genome shotgun and EST assembler
 MSE=on: A multiple sequence screen editor
 MYEMBOSS=on: Examples for developers of EMBOSS apps
 PHYLIPNEW=on: Phylogeny inference
 SIGNATURE=on: Protein domain apps
 STRUCTURE=on: Protein domain apps
 TOPO=on: Transmembrane display
 VIENNA=on: RNA folding
=== Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--
--x-libraries=/usr/local/lib --x-includes=/usr/local/include 
--prefix=/usr/local/emboss ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include LDFLAGS= -L/usr/local/emboss/lib -L/usr/local/lib 
-L/usr/local/emboss/lib TMPDIR=/tmp TMPDIR=/tmp MAKE=gmake SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site 
lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
TMPDIR=/tmp TMPDIR=/tmp MOTIFLIB=-L/usr/local/lib -lXm -lXp NO_PIE=yes 
SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local/emboss  LOCALBASE=/usr/local  
LIBDIR=/usr/lib  CC=cc CFLAGS=-O2 -pipe -fno-strict-aliasing  CPP=cpp 
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include  LDFLAGS= -L/usr/local/emboss/lib 
-L/usr/local/lib -L/usr/local/emboss/lib LIBS=  CXX=c++ CXXFLAGS=-O2 
-pipe -fno-strict-aliasing  MANPREFIX=/usr/local/emboss 
BSD_INSTALL_PROGRAM=install  -s -o root -g wheel -m 555  
BSD_INSTALL_LIB=install  -s -o root -g wheel -m 444  
BSD_INSTALL_SCRIPT=install  -o root -g wheel -m 555  
BSD_INSTALL_DATA=install  -o root -g wheel -m 444  BSD_INSTALL_MAN=install  
-o root -g wheel -m 444
--End MAKE_ENV--

--PLIST_SUB--
PLIST_DOMAINATRIX=
PLIST_EMNU=
PLIST_ESIM4=
PLIST_HMMER=
PLIST_MEMENEW=
PLIST_MSE=
PLIST_PHYLIPNEW=
PLIST_TOPO=
PLIST_DOMALIGN=
PLIST_DOMSEARCH=
PLIST_SIGNATURE=
PLIST_STRUCTURE=
PLIST_MYEMBOSS=
PLIST_VIENNA=
PLIST_MIRA=
PLIST_IPRSCAN=
PLIST_CBSTOOLS=
OSREL=10.0
PREFIX=%D
LOCALBASE=/usr/local
PORTDOCS=
PORTEXAMPLES=
PORTDATA=
LIB32DIR=lib
DOCSDIR=share/doc/embassy
EXAMPLESDIR=share/examples/embassy
DATADIR=share/embassy
WWWDIR=www/embassy
ETCDIR=etc/embassy
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local/emboss
LOCALBASE=/usr/local
DATADIR=/usr/local/emboss/share/embassy
DOCSDIR=/usr/local/emboss/share/doc/embassy
EXAMPLESDIR=/usr/local/emboss/share/examples/embassy
WWWDIR=/usr/local/emboss/www/embassy
ETCDIR=/usr/local/emboss/etc/embassy
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
 /usr/local/etc/poudriere.d/make.conf 
WITH_PKGNG=yes
# clean-restricted ran via poudriere.conf NO_RESTRICTED
#NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---

[REL - 10amd64-default][biology/embassy] Failed for embassy-6.2.0_2 in build

2014-06-20 Thread pkg-fallout-builder 
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: w...@freebsd.org
Last committer: mar...@freebsd.org
Ident:  $FreeBSD: head/biology/embassy/Makefile 355684 2014-05-29 
10:47:58Z marino $
Log URL:
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-06-19_20h44m32s/logs/embassy-6.2.0_2.log
Build URL:  
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-06-19_20h44m32s
Log:

 Building biology/embassy
build started at Fri Jun 20 07:05:32 UTC 2014
port directory: /usr/ports/biology/embassy
building for: FreeBSD 10amd64-default-job-19 10.0-RELEASE-p3 FreeBSD 
10.0-RELEASE-p3 amd64
maintained by: w...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/embassy/Makefile 355684 2014-05-29 
10:47:58Z marino $
Poudriere version: 3.1-pre
Host OSVERSION: 1100022
Jail OSVERSION: 1000510

---Begin Environment---
OSVERSION=1000510
UNAME_v=FreeBSD 10.0-RELEASE-p3
UNAME_r=10.0-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/build/10amd64-default/ref
PKG_EXT=txz
tpid=75360
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=embassy-6.2.0_2
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
OLDPWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/rdeps
PWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/pool
MASTERNAME=10amd64-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
=== The following configuration options are available for embassy-6.2.0_2:
 CBSTOOLS=on: CBS Tools
 DOMAINATRIX=on: Protein domain apps
 DOMALIGN=on: Protein domain apps
 DOMSEARCH=on: Protein domain apps
 EMNU=on: EMBOSS simple menu
 ESIM4=on: Align cDNA/EST to genome
 HMMER=on: HMM alignment and searches
 IPRSCAN=on: InterPro scan
 MEMENEW=on: Motif detection
 MIRA=on: Whole Genome shotgun and EST assembler
 MSE=on: A multiple sequence screen editor
 MYEMBOSS=on: Examples for developers of EMBOSS apps
 PHYLIPNEW=on: Phylogeny inference
 SIGNATURE=on: Protein domain apps
 STRUCTURE=on: Protein domain apps
 TOPO=on: Transmembrane display
 VIENNA=on: RNA folding
=== Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--
--x-libraries=/usr/local/lib --x-includes=/usr/local/include 
--prefix=/usr/local/emboss ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include LDFLAGS= -L/usr/local/emboss/lib -L/usr/local/lib 
-L/usr/local/emboss/lib TMPDIR=/tmp TMPDIR=/tmp MAKE=gmake SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site 
lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
TMPDIR=/tmp TMPDIR=/tmp MOTIFLIB=-L/usr/local/lib -lXm -lXp NO_PIE=yes 
SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local/emboss  LOCALBASE=/usr/local  
LIBDIR=/usr/lib  CC=cc CFLAGS=-O2 -pipe -fno-strict-aliasing  CPP=cpp 
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include  LDFLAGS= -L/usr/local/emboss/lib 
-L/usr/local/lib -L/usr/local/emboss/lib LIBS=  CXX=c++ CXXFLAGS=-O2 
-pipe -fno-strict-aliasing  MANPREFIX=/usr/local/emboss 
BSD_INSTALL_PROGRAM=install  -s -o root -g wheel -m 555  
BSD_INSTALL_LIB=install  -s -o root -g wheel -m 444  
BSD_INSTALL_SCRIPT=install  -o root -g wheel -m 555  
BSD_INSTALL_DATA=install  -o root -g wheel -m 444  BSD_INSTALL_MAN=install  
-o root -g wheel -m 444
--End MAKE_ENV--

--PLIST_SUB--
PLIST_DOMAINATRIX=
PLIST_EMNU=
PLIST_ESIM4=
PLIST_HMMER=
PLIST_MEMENEW=
PLIST_MSE=
PLIST_PHYLIPNEW=
PLIST_TOPO=
PLIST_DOMALIGN=
PLIST_DOMSEARCH=
PLIST_SIGNATURE=
PLIST_STRUCTURE=
PLIST_MYEMBOSS=
PLIST_VIENNA=
PLIST_MIRA=
PLIST_IPRSCAN=
PLIST_CBSTOOLS=
OSREL=10.0
PREFIX=%D
LOCALBASE=/usr/local
PORTDOCS=
PORTEXAMPLES=
PORTDATA=
LIB32DIR=lib
DOCSDIR=share/doc/embassy
EXAMPLESDIR=share/examples/embassy
DATADIR=share/embassy
WWWDIR=www/embassy
ETCDIR=etc/embassy
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local/emboss
LOCALBASE=/usr/local
DATADIR=/usr/local/emboss/share/embassy
DOCSDIR=/usr/local/emboss/share/doc/embassy
EXAMPLESDIR=/usr/local/emboss/share/examples/embassy
WWWDIR=/usr/local/emboss/www/embassy
ETCDIR=/usr/local/emboss/etc/embassy
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
 /usr/local/etc/poudriere.d/make.conf 
WITH_PKGNG=yes
# clean-restricted ran via poudriere.conf NO_RESTRICTED
#NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End

[REL - 10amd64-default][biology/embassy] Failed for embassy-6.2.0_2 in build

2014-06-13 Thread pkg-fallout-builder 
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: w...@freebsd.org
Last committer: mar...@freebsd.org
Ident:  $FreeBSD: head/biology/embassy/Makefile 355684 2014-05-29 
10:47:58Z marino $
Log URL:
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-06-12_19h04m15s/logs/embassy-6.2.0_2.log
Build URL:  
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-06-12_19h04m15s
Log:

 Building biology/embassy
build started at Fri Jun 13 08:36:44 UTC 2014
port directory: /usr/ports/biology/embassy
building for: FreeBSD 10amd64-default-job-07 10.0-RELEASE-p3 FreeBSD 
10.0-RELEASE-p3 amd64
maintained by: w...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/embassy/Makefile 355684 2014-05-29 
10:47:58Z marino $
Poudriere version: 3.1-pre
Host OSVERSION: 1100022
Jail OSVERSION: 1000510

---Begin Environment---
OSVERSION=1000510
UNAME_v=FreeBSD 10.0-RELEASE-p3
UNAME_r=10.0-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/build/10amd64-default/ref
PKG_EXT=txz
tpid=53036
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=embassy-6.2.0_2
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
OLDPWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/rdeps
PWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/pool
MASTERNAME=10amd64-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
=== The following configuration options are available for embassy-6.2.0_2:
 CBSTOOLS=on: CBS Tools
 DOMAINATRIX=on: Protein domain apps
 DOMALIGN=on: Protein domain apps
 DOMSEARCH=on: Protein domain apps
 EMNU=on: EMBOSS simple menu
 ESIM4=on: Align cDNA/EST to genome
 HMMER=on: HMM alignment and searches
 IPRSCAN=on: InterPro scan
 MEMENEW=on: Motif detection
 MIRA=on: Whole Genome shotgun and EST assembler
 MSE=on: A multiple sequence screen editor
 MYEMBOSS=on: Examples for developers of EMBOSS apps
 PHYLIPNEW=on: Phylogeny inference
 SIGNATURE=on: Protein domain apps
 STRUCTURE=on: Protein domain apps
 TOPO=on: Transmembrane display
 VIENNA=on: RNA folding
=== Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--
--x-libraries=/usr/local/lib --x-includes=/usr/local/include 
--prefix=/usr/local/emboss ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include LDFLAGS= -L/usr/local/emboss/lib -L/usr/local/lib 
-L/usr/local/emboss/lib TMPDIR=/tmp TMPDIR=/tmp MAKE=gmake SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site 
lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
TMPDIR=/tmp TMPDIR=/tmp MOTIFLIB=-L/usr/local/lib -lXm -lXp NO_PIE=yes 
SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local/emboss  LOCALBASE=/usr/local  
LIBDIR=/usr/lib  CC=cc CFLAGS=-O2 -pipe -fno-strict-aliasing  CPP=cpp 
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include  LDFLAGS= -L/usr/local/emboss/lib 
-L/usr/local/lib -L/usr/local/emboss/lib  CXX=c++ CXXFLAGS=-O2 -pipe 
-fno-strict-aliasing  MANPREFIX=/usr/local/emboss 
BSD_INSTALL_PROGRAM=install  -s -o root -g wheel -m 555  
BSD_INSTALL_LIB=install  -s -o root -g wheel -m 444  
BSD_INSTALL_SCRIPT=install  -o root -g wheel -m 555  
BSD_INSTALL_DATA=install  -o root -g wheel -m 444  BSD_INSTALL_MAN=install  
-o root -g wheel -m 444
--End MAKE_ENV--

--PLIST_SUB--
PLIST_DOMAINATRIX=
PLIST_EMNU=
PLIST_ESIM4=
PLIST_HMMER=
PLIST_MEMENEW=
PLIST_MSE=
PLIST_PHYLIPNEW=
PLIST_TOPO=
PLIST_DOMALIGN=
PLIST_DOMSEARCH=
PLIST_SIGNATURE=
PLIST_STRUCTURE=
PLIST_MYEMBOSS=
PLIST_VIENNA=
PLIST_MIRA=
PLIST_IPRSCAN=
PLIST_CBSTOOLS=
OSREL=10.0
PREFIX=%D
LOCALBASE=/usr/local
PORTDOCS=
PORTEXAMPLES=
PORTDATA=
LIB32DIR=lib
DOCSDIR=share/doc/embassy
EXAMPLESDIR=share/examples/embassy
DATADIR=share/embassy
WWWDIR=www/embassy
ETCDIR=etc/embassy
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local/emboss
LOCALBASE=/usr/local
DATADIR=/usr/local/emboss/share/embassy
DOCSDIR=/usr/local/emboss/share/doc/embassy
EXAMPLESDIR=/usr/local/emboss/share/examples/embassy
WWWDIR=/usr/local/emboss/www/embassy
ETCDIR=/usr/local/emboss/etc/embassy
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
 /usr/local/etc/poudriere.d/make.conf 
WITH_PKGNG=yes
# clean-restricted ran via poudriere.conf NO_RESTRICTED
#NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---

[REL - 10amd64-default][biology/embassy] Failed for embassy-6.2.0_2 in build

2014-06-05 Thread pkg-fallout-builder 
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: w...@freebsd.org
Last committer: mar...@freebsd.org
Ident:  $FreeBSD: head/biology/embassy/Makefile 355684 2014-05-29 
10:47:58Z marino $
Log URL:
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-06-05_12h56m47s/logs/embassy-6.2.0_2.log
Build URL:  
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-06-05_12h56m47s
Log:

 Building biology/embassy
build started at Fri Jun  6 00:28:26 UTC 2014
port directory: /usr/ports/biology/embassy
building for: FreeBSD 10amd64-default-job-16 10.0-RELEASE-p3 FreeBSD 
10.0-RELEASE-p3 amd64
maintained by: w...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/embassy/Makefile 355684 2014-05-29 
10:47:58Z marino $
Poudriere version: 3.1-pre
Host OSVERSION: 1100013
Jail OSVERSION: 1000510

---Begin Environment---
OSVERSION=1000510
UNAME_v=FreeBSD 10.0-RELEASE-p3
UNAME_r=10.0-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/build/10amd64-default/ref
PKG_EXT=txz
tpid=65619
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=embassy-6.2.0_2
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
OLDPWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/rdeps
PWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/pool
MASTERNAME=10amd64-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
=== The following configuration options are available for embassy-6.2.0_2:
 CBSTOOLS=on: CBS Tools
 DOMAINATRIX=on: Protein domain apps
 DOMALIGN=on: Protein domain apps
 DOMSEARCH=on: Protein domain apps
 EMNU=on: EMBOSS simple menu
 ESIM4=on: Align cDNA/EST to genome
 HMMER=on: HMM alignment and searches
 IPRSCAN=on: InterPro scan
 MEMENEW=on: Motif detection
 MIRA=on: Whole Genome shotgun and EST assembler
 MSE=on: A multiple sequence screen editor
 MYEMBOSS=on: Examples for developers of EMBOSS apps
 PHYLIPNEW=on: Phylogeny inference
 SIGNATURE=on: Protein domain apps
 STRUCTURE=on: Protein domain apps
 TOPO=on: Transmembrane display
 VIENNA=on: RNA folding
=== Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--
--x-libraries=/usr/local/lib --x-includes=/usr/local/include 
--prefix=/usr/local/emboss ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include LDFLAGS= -L/usr/local/emboss/lib -L/usr/local/lib 
-L/usr/local/emboss/lib TMPDIR=/tmp TMPDIR=/tmp MAKE=gmake SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site 
lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
TMPDIR=/tmp TMPDIR=/tmp MOTIFLIB=-L/usr/local/lib -lXm -lXp SHELL=/bin/sh 
NO_LINT=YES PREFIX=/usr/local/emboss  LOCALBASE=/usr/local  LIBDIR=/usr/lib  
CC=cc CFLAGS=-O2 -pipe -fno-strict-aliasing  CPP=cpp 
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include  LDFLAGS= -L/usr/local/emboss/lib 
-L/usr/local/lib -L/usr/local/emboss/lib  CXX=c++ CXXFLAGS=-O2 -pipe 
-fno-strict-aliasing  MANPREFIX=/usr/local/emboss 
BSD_INSTALL_PROGRAM=install  -s -o root -g wheel -m 555  
BSD_INSTALL_LIB=install  -s -o root -g wheel -m 444  
BSD_INSTALL_SCRIPT=install  -o root -g wheel -m 555  
BSD_INSTALL_DATA=install  -o root -g wheel -m 444  BSD_INSTALL_MAN=install  
-o root -g wheel -m 444
--End MAKE_ENV--

--PLIST_SUB--
PLIST_DOMAINATRIX=
PLIST_EMNU=
PLIST_ESIM4=
PLIST_HMMER=
PLIST_MEMENEW=
PLIST_MSE=
PLIST_PHYLIPNEW=
PLIST_TOPO=
PLIST_DOMALIGN=
PLIST_DOMSEARCH=
PLIST_SIGNATURE=
PLIST_STRUCTURE=
PLIST_MYEMBOSS=
PLIST_VIENNA=
PLIST_MIRA=
PLIST_IPRSCAN=
PLIST_CBSTOOLS=
OSREL=10.0
PREFIX=%D
LOCALBASE=/usr/local
PORTDOCS=
PORTEXAMPLES=
PORTDATA=
LIB32DIR=lib
DOCSDIR=share/doc/embassy
EXAMPLESDIR=share/examples/embassy
DATADIR=share/embassy
WWWDIR=www/embassy
ETCDIR=etc/embassy
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local/emboss
LOCALBASE=/usr/local
DATADIR=/usr/local/emboss/share/embassy
DOCSDIR=/usr/local/emboss/share/doc/embassy
EXAMPLESDIR=/usr/local/emboss/share/examples/embassy
WWWDIR=/usr/local/emboss/www/embassy
ETCDIR=/usr/local/emboss/etc/embassy
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
 /usr/local/etc/poudriere.d/make.conf 
WITH_PKGNG=yes
# clean-restricted ran via poudriere.conf NO_RESTRICTED
#NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
===

[REL - 10amd64-default][biology/embassy] Failed for embassy-6.2.0_2 in build

2014-06-01 Thread pkg-fallout-builder 
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: w...@freebsd.org
Last committer: b...@freebsd.org
Ident:  $FreeBSD: head/biology/embassy/Makefile 339842 2014-01-15 
22:48:32Z bapt $
Log URL:
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-05-31_16h19m31s/logs/embassy-6.2.0_2.log
Build URL:  
http://beefy2.isc.freebsd.org/bulk/10amd64-default/2014-05-31_16h19m31s
Log:

 Building biology/embassy
build started at Sun Jun  1 10:42:52 UTC 2014
port directory: /usr/ports/biology/embassy
building for: FreeBSD 10amd64-default-job-22 10.0-RELEASE-p3 FreeBSD 
10.0-RELEASE-p3 amd64
maintained by: w...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/embassy/Makefile 339842 2014-01-15 
22:48:32Z bapt $
Poudriere version: 3.1-pre
Host OSVERSION: 1100013
Jail OSVERSION: 1000510

---Begin Environment---
OSVERSION=1000510
UNAME_v=FreeBSD 10.0-RELEASE-p3
UNAME_r=10.0-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/build/10amd64-default/ref
PKG_EXT=txz
tpid=22067
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=embassy-6.2.0_2
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
OLDPWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/rdeps
PWD=/usr/local/poudriere/data/build/10amd64-default/ref/poudriere/pool
MASTERNAME=10amd64-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
=== The following configuration options are available for embassy-6.2.0_2:
 CBSTOOLS=on: CBS Tools
 DOMAINATRIX=on: Protein domain apps
 DOMALIGN=on: Protein domain apps
 DOMSEARCH=on: Protein domain apps
 EMNU=on: EMBOSS simple menu
 ESIM4=on: Align cDNA/EST to genome
 HMMER=on: HMM alignment and searches
 IPRSCAN=on: InterPro scan
 MEMENEW=on: Motif detection
 MIRA=on: Whole Genome shotgun and EST assembler
 MSE=on: A multiple sequence screen editor
 MYEMBOSS=on: Examples for developers of EMBOSS apps
 PHYLIPNEW=on: Phylogeny inference
 SIGNATURE=on: Protein domain apps
 STRUCTURE=on: Protein domain apps
 TOPO=on: Transmembrane display
 VIENNA=on: RNA folding
=== Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--
--x-libraries=/usr/local/lib --x-includes=/usr/local/include 
--prefix=/usr/local/emboss ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include LDFLAGS= -L/usr/local/emboss/lib -L/usr/local/lib 
-L/usr/local/emboss/lib TMPDIR=/tmp TMPDIR=/tmp MAKE=gmake SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site 
lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
TMPDIR=/tmp TMPDIR=/tmp MOTIFLIB=-L/usr/local/lib -lXm -lXp SHELL=/bin/sh 
NO_LINT=YES PREFIX=/usr/local/emboss  LOCALBASE=/usr/local  LIBDIR=/usr/lib  
CC=cc CFLAGS=-O2 -pipe -fno-strict-aliasing  CPP=cpp 
CPPFLAGS=-I/usr/local/emboss/include -I/usr/local/include 
-I/usr/local/emboss/include  LDFLAGS= -L/usr/local/emboss/lib 
-L/usr/local/lib -L/usr/local/emboss/lib  CXX=c++ CXXFLAGS=-O2 -pipe 
-fno-strict-aliasing  MANPREFIX=/usr/local/emboss 
BSD_INSTALL_PROGRAM=install  -s -o root -g wheel -m 555  
BSD_INSTALL_LIB=install  -s -o root -g wheel -m 444  
BSD_INSTALL_SCRIPT=install  -o root -g wheel -m 555  
BSD_INSTALL_DATA=install  -o root -g wheel -m 444  BSD_INSTALL_MAN=install  
-o root -g wheel -m 444
--End MAKE_ENV--

--PLIST_SUB--
PLIST_DOMAINATRIX=
PLIST_EMNU=
PLIST_ESIM4=
PLIST_HMMER=
PLIST_MEMENEW=
PLIST_MSE=
PLIST_PHYLIPNEW=
PLIST_TOPO=
PLIST_DOMALIGN=
PLIST_DOMSEARCH=
PLIST_SIGNATURE=
PLIST_STRUCTURE=
PLIST_MYEMBOSS=
PLIST_VIENNA=
PLIST_MIRA=
PLIST_IPRSCAN=
PLIST_CBSTOOLS=
OSREL=10.0
PREFIX=%D
LOCALBASE=/usr/local
PORTDOCS=
PORTEXAMPLES=
PORTDATA=
LIB32DIR=lib
DOCSDIR=share/doc/embassy
EXAMPLESDIR=share/examples/embassy
DATADIR=share/embassy
WWWDIR=www/embassy
ETCDIR=etc/embassy
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local/emboss
LOCALBASE=/usr/local
DATADIR=/usr/local/emboss/share/embassy
DOCSDIR=/usr/local/emboss/share/doc/embassy
EXAMPLESDIR=/usr/local/emboss/share/examples/embassy
WWWDIR=/usr/local/emboss/www/embassy
ETCDIR=/usr/local/emboss/etc/embassy
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
 /usr/local/etc/poudriere.d/make.conf 
WITH_PKGNG=yes
# clean-restricted ran via poudriere.conf NO_RESTRICTED
#NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
===  Cleaning