Re: [Freesurfer] DTI Multi band sequence?

[Martin Juneja]

Thanks a lot Dr. Harms and Dr. Wakeman for the help. This is really helpful.

On Wed, Nov 30, 2016 at 10:24 AM, Harms, Michael  wrote:

>
> That would be yet another way.
> For those that are curious, the field is “MosaicRefAcqTimes”.
>
> cheers,
> -MH
> --
> Michael Harms, Ph.D.
>
> ---
> Conte Center for the Neuroscience of Mental Disorders
> Washington University School of Medicine
> Department of Psychiatry, Box 8134
> 660 South Euclid Ave.Tel: 314-747-6173
> St. Louis, MO  63110Email: mha...@wustl.edu
>
>
>
>
> On 11/30/16, 11:16 AM, "freesurfer-boun...@nmr.mgh.harvard.edu on behalf
> of dgw"  dgwake...@gmail.com> wrote:
>
> I can't remember the tag numbers, but I believe the time of slice
> acquisition is in the dicom. You should be able to just pull that
> field on one volume and compare the field for all slices and see if
> any of them have the same time.
>
> hth
> d
>
> On Wed, Nov 30, 2016 at 12:10 PM, Martin Juneja  wrote:
> > Hi,
> >
> > I was wondering if there is any way in FreeSurfer/FSL/MATLAB to determine
> > whether the DTI data (in DICOM format) I have is multi-band sequence?
> >
> > I used dicominfo in MATLAB but couldn't find any information related to
> > multi-band in the dicom header.
> >
> > Any help would be really appreciated.
> >
> > ___
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >
> >
> > The information in this e-mail is intended only for the person to whom
> >it is
> > addressed. If you believe this e-mail was sent to you in error and the
> > e-mail
> > contains patient information, please contact the Partners Compliance
> > HelpLine at
> > http://www.partners.org/complianceline . If the e-mail was sent to you
> in
> > error
> > but does not contain patient information, please contact the sender and
> > properly
> > dispose of the e-mail.
> >
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
> 
> The materials in this message are private and may contain Protected
> Healthcare Information or other information of a sensitive nature. If you
> are not the intended recipient, be advised that any unauthorized use,
> disclosure, copying or the taking of any action in reliance on the contents
> of this information is strictly prohibited. If you have received this email
> in error, please immediately notify the sender via telephone or return mail.
>
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Re: [Freesurfer] DTI Multi band sequence?

[Harms, Michael]

That would be yet another way.
For those that are curious, the field is “MosaicRefAcqTimes”.

cheers,
-MH
--
Michael Harms, Ph.D.

---
Conte Center for the Neuroscience of Mental Disorders
Washington University School of Medicine
Department of Psychiatry, Box 8134
660 South Euclid Ave.Tel: 314-747-6173
St. Louis, MO  63110Email: mha...@wustl.edu




On 11/30/16, 11:16 AM, "freesurfer-boun...@nmr.mgh.harvard.edu on behalf
of dgw"  wrote:

I can't remember the tag numbers, but I believe the time of slice
acquisition is in the dicom. You should be able to just pull that
field on one volume and compare the field for all slices and see if
any of them have the same time.

hth
d

On Wed, Nov 30, 2016 at 12:10 PM, Martin Juneja  wrote:
> Hi,
>
> I was wondering if there is any way in FreeSurfer/FSL/MATLAB to determine
> whether the DTI data (in DICOM format) I have is multi-band sequence?
>
> I used dicominfo in MATLAB but couldn't find any information related to
> multi-band in the dicom header.
>
> Any help would be really appreciated.
>
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
> The information in this e-mail is intended only for the person to whom
>it is
> addressed. If you believe this e-mail was sent to you in error and the
> e-mail
> contains patient information, please contact the Partners Compliance
> HelpLine at
> http://www.partners.org/complianceline . If the e-mail was sent to you in
> error
> but does not contain patient information, please contact the sender and
> properly
> dispose of the e-mail.
>
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer



The materials in this message are private and may contain Protected Healthcare 
Information or other information of a sensitive nature. If you are not the 
intended recipient, be advised that any unauthorized use, disclosure, copying 
or the taking of any action in reliance on the contents of this information is 
strictly prohibited. If you have received this email in error, please 
immediately notify the sender via telephone or return mail.

___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Re: [Freesurfer] DTI Multi band sequence?

[dgw]

I can't remember the tag numbers, but I believe the time of slice
acquisition is in the dicom. You should be able to just pull that
field on one volume and compare the field for all slices and see if
any of them have the same time.

hth
d

On Wed, Nov 30, 2016 at 12:10 PM, Martin Juneja  wrote:
> Hi,
>
> I was wondering if there is any way in FreeSurfer/FSL/MATLAB to determine
> whether the DTI data (in DICOM format) I have is multi-band sequence?
>
> I used dicominfo in MATLAB but couldn't find any information related to
> multi-band in the dicom header.
>
> Any help would be really appreciated.
>
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
> The information in this e-mail is intended only for the person to whom it is
> addressed. If you believe this e-mail was sent to you in error and the
> e-mail
> contains patient information, please contact the Partners Compliance
> HelpLine at
> http://www.partners.org/complianceline . If the e-mail was sent to you in
> error
> but does not contain patient information, please contact the sender and
> properly
> dispose of the e-mail.
>
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Re: [Freesurfer] DTI Multi band sequence?

[Harms, Michael]

Hi Martin,
I’ve addressed this in your query to the FSL list.  Please see my response 
there.

--
Michael Harms, Ph.D.
---
Conte Center for the Neuroscience of Mental Disorders
Washington University School of Medicine
Department of Psychiatry, Box 8134
660 South Euclid Ave. Tel: 314-747-6173
St. Louis, MO  63110 Email: mha...@wustl.edu

From: 
<freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>>
 on behalf of Martin Juneja <mj70...@gmail.com<mailto:mj70...@gmail.com>>
Reply-To: Freesurfer support list 
<freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>>
Date: Wednesday, November 30, 2016 at 11:10 AM
To: Freesurfer support list 
<freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>>
Subject: [Freesurfer] DTI Multi band sequence?

Hi,

I was wondering if there is any way in FreeSurfer/FSL/MATLAB to determine 
whether the DTI data (in DICOM format) I have is multi-band sequence?

I used dicominfo in MATLAB but couldn't find any information related to 
multi-band in the dicom header.

Any help would be really appreciated.


The materials in this message are private and may contain Protected Healthcare 
Information or other information of a sensitive nature. If you are not the 
intended recipient, be advised that any unauthorized use, disclosure, copying 
or the taking of any action in reliance on the contents of this information is 
strictly prohibited. If you have received this email in error, please 
immediately notify the sender via telephone or return mail.
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

[Freesurfer] DTI Multi band sequence?

[Martin Juneja]

Hi,

I was wondering if there is any way in FreeSurfer/FSL/MATLAB to determine
whether the DTI data (in DICOM format) I have is multi-band sequence?

I used dicominfo in MATLAB but couldn't find any information related to
multi-band in the dicom header.

Any help would be really appreciated.
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.