Re: [Freesurfer] ERROR: Cannot find stats file

2021-04-05 Thread Douglas N. Greve 
Does that file exist? If not, have you run the amygdalar nuclei 
segmentation?


On 3/30/2021 3:00 PM, atacan zeybek wrote:


External Email - Use Caution

External Email - Use Caution

Hello FreeSurfer Developers,

I'm attempting to create a text file of amygdalar nuclei of given 
subjects. I use this command:


asegstats2table --subjects 8070  8071  8077 
--statsfile=amygdalar-nuclei.lh.T1.v21.stats 
--tablefile=amygdalarnuclei.lh.T1.v21.txt –skip


And get an error like this:

ERROR: Cannot find stats file 
/home/atacan/Desktop/freesurfer/subjects/8070/stats/amygdalar-nuclei.lh.T1.v21.stats


Unfortunately I can't search the mail archives because I get an 
another error while loading the page.


Freesurfer version: CentOS 7 x86_64 (64b) tar archive
Platform: Ubuntu 20.04.2 LTS

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[Freesurfer] ERROR: Cannot find stats file

2021-03-30 Thread atacan zeybek 
External Email - Use Caution

Hello FreeSurfer Developers,

I'm attempting to create a text file of amygdalar nuclei of given subjects. I 
use this command:

asegstats2table --subjects 8070  8071  8077 
--statsfile=amygdalar-nuclei.lh.T1.v21.stats 
--tablefile=amygdalarnuclei.lh.T1.v21.txt –skip

And get an error like this:

ERROR: Cannot find stats file 
/home/atacan/Desktop/freesurfer/subjects/8070/stats/amygdalar-nuclei.lh.T1.v21.stats

Unfortunately I can't search the mail archives because I get an another error 
while loading the page.

Freesurfer version: CentOS 7 x86_64 (64b) tar archive
Platform: Ubuntu 20.04.2 LTS
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