Re: [Freesurfer] Extract ThickAvg ThickStd from rh/lh.aparc.stats of a specific structure for group of subjects

[Greve, Douglas N.,Ph.D.]

You can use a PARCSFILE. Run aparcstats2table with --help to get more info

On 9/14/19 3:30 PM, vin rasa wrote:

External Email - Use Caution

Dear Freesurfer experts,

Is there a shortcut to extract mean thickness(ThickAvg) and std (ThickStd) from 
rh/lh.aparc.stats for let's say 4 structures only.

I found aparcstats2table command, which seems to extract all the segmented 
regions.
https://surfer.nmr.mgh.harvard.edu/fswiki/aparcstats2table

Thanks in advance



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[Freesurfer] Extract ThickAvg ThickStd from rh/lh.aparc.stats of a specific structure for group of subjects

[vin rasa]

External Email - Use Caution

Dear Freesurfer experts,

Is there a shortcut to extract mean thickness(ThickAvg) and std (ThickStd)
from rh/lh.aparc.stats for let's say 4 structures only.

I found aparcstats2table command, which seems to extract all the segmented
regions.
https://surfer.nmr.mgh.harvard.edu/fswiki/aparcstats2table

Thanks in advance
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