[Freesurfer] How to clone from T1 to brainmask in freeview to amend a bad skull strip

2014-02-28 Thread Emad Ahmadi
Hi!

I want to know how to clone from T1.mgz to brainmask.mgz in freeview (to amend 
a skullstript that has removed too much). I couldn’t find the tool in freeview. 

Thank you very much,
Emad


Emad Ahmadi, MD
---
Postdoc Research Fellow
Department of Radiology
Massachusetts General Hospital
Harvard Medical School

25 New Chardon Street, Suite 400
Boston, MA 02114
Tel: 617 726 5237
Email: e...@nmr.mgh.harvard.edu



___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.


Re: [Freesurfer] How to clone from T1 to brainmask in freeview to amend a bad skull strip

2014-02-28 Thread Louis Nicholas Vinke

Hi Emad,
Which version of FS are you using?  The freeview in the 5.3 release has 
the clone tool within the voxel edit mode, but it's not in 5.1 or earlier. 
It's represented by an icon with a blue and gray rectangle.


Take a look at the 5th section on this page:
https://surfer.nmr.mgh.harvard.edu/fswiki/FreeviewGuide/FreeviewTools/VoxelEdit

-Louis

On Fri, 28 Feb 2014, Emad Ahmadi wrote:


Hi!
I want to know how to clone from T1.mgz to brainmask.mgz in freeview (to amend 
a skullstript that has removed too much). I
couldn’t find the tool in freeview. 

Thank you very much,
Emad


Emad Ahmadi, MD
---
Postdoc Research Fellow
Department of Radiology
Massachusetts General Hospital
Harvard Medical School

25 New Chardon Street, Suite 400
Boston, MA 02114
Tel: 617 726 5237
Email: e...@nmr.mgh.harvard.edu




___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.