External Email - Use Caution
Sounds like you do not have the tcsh shell installed on your system. There is
no need to change your default shell from bash to tcsh, but you need tcsh
installed for FreeSurfer to work.
Have your system admin install it. Since Mint is Debian-based, this should do
it:
sudo apt-get install tcsh
Best,
Tim
> On December 3, 2018 at 9:26 AM Maedeh Khalilian
> wrote:
>
>
> External Email - Use Caution
>
> Dear experts,
> Thank u very much for all the help so far
> I have mint19 on my system and I have installed FreeSurfer on it.
> when I run a command like "mri_convert" it is ok.
> But when I run "recon-all" and some other commands, I see the error below :
>
> bash: /usr/local/freesurfer/bin/recon-all: /bin/tcsh: bad interpreter: No
> such file or directory
> by the way my default setup file is .bashrc.
> I really dunno what the problem is.I would be grateful if u could help me.
> Cheers,
> Maedeh___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Dr. Tim Schäfer
Postdoc Computational Neuroimaging
Department of Child and Adolescent Psychiatry, Psychosomatics and Psychotherapy
University Hospital Frankfurt, Goethe University Frankfurt am Main, Germany
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