Re: [Freesurfer] Visualizing Single anatomical ROI on FreeView

[Douglas Greve]

There is also an "All" button that if you uncheck will uncheck all of 
them; then you can go check the one(s) you want


On 4/13/18 5:22 PM, Ruopeng Wang wrote:
> BTW, that only applies to the dev version.
>
> Ruopeng
>
>> On Apr 13, 2018, at 5:18 PM, Ruopeng Wang  wrote:
>>
>> Or simply uncheck every item in the look up table except the one you want to 
>> show.
>>
>>> On Apr 13, 2018, at 5:15 PM, Bruce Fischl  
>>> wrote:
>>>
>>> you can use mri_extract_label on the aseg.mgz to pull out just the label
>>> you want, then load it and the MRI into freeview (if that is what you
>>> mean)
>>>
>>> cheers
>>> Bruce
>>> On Fri, 13 Apr 2018, Srinivasan, Dhivya wrote:
>>>
 Hi,

 I am attempting  to view single anatomical ROI (say Right-Hippocampus) 
 overlaid on MRI image using freeview.How can I achieve this?

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>>
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>>
>>
>
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Re: [Freesurfer] Visualizing Single anatomical ROI on FreeView

[Ruopeng Wang]

BTW, that only applies to the dev version. 

Ruopeng

> On Apr 13, 2018, at 5:18 PM, Ruopeng Wang  wrote:
> 
> Or simply uncheck every item in the look up table except the one you want to 
> show.
> 
>> On Apr 13, 2018, at 5:15 PM, Bruce Fischl  wrote:
>> 
>> you can use mri_extract_label on the aseg.mgz to pull out just the label 
>> you want, then load it and the MRI into freeview (if that is what you 
>> mean)
>> 
>> cheers
>> Bruce
>> On Fri, 13 Apr 2018, Srinivasan, Dhivya wrote:
>> 
>>> Hi,
>>> 
>>> I am attempting  to view single anatomical ROI (say Right-Hippocampus) 
>>> overlaid on MRI image using freeview.How can I achieve this?
>>> 
>>> ___
>>> Freesurfer mailing list
>>> Freesurfer@nmr.mgh.harvard.edu
>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>> 
>>> 
>>> 
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>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>> 
>> 
> 
> 
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> 
> 


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Re: [Freesurfer] Visualizing Single anatomical ROI on FreeView

[Ruopeng Wang]

Or simply uncheck every item in the look up table except the one you want to 
show.

> On Apr 13, 2018, at 5:15 PM, Bruce Fischl  wrote:
> 
> you can use mri_extract_label on the aseg.mgz to pull out just the label 
> you want, then load it and the MRI into freeview (if that is what you 
> mean)
> 
> cheers
> Bruce
> On Fri, 13 Apr 2018, Srinivasan, Dhivya wrote:
> 
>> Hi,
>> 
>>  I am attempting  to view single anatomical ROI (say Right-Hippocampus) 
>> overlaid on MRI image using freeview.How can I achieve this?
>> 
>> ___
>> Freesurfer mailing list
>> Freesurfer@nmr.mgh.harvard.edu
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>> 
>> 
>> 
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> 
> 


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Re: [Freesurfer] Visualizing Single anatomical ROI on FreeView

[Bruce Fischl]

you can use mri_extract_label on the aseg.mgz to pull out just the label 
you want, then load it and the MRI into freeview (if that is what you 
mean)

cheers
Bruce
On Fri, 13 Apr 2018, Srinivasan, Dhivya wrote:

> Hi,
>
>   I am attempting  to view single anatomical ROI (say Right-Hippocampus) 
> overlaid on MRI image using freeview.How can I achieve this?
>
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
>
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[Freesurfer] Visualizing Single anatomical ROI on FreeView

[Srinivasan, Dhivya]

Hi,

   I am attempting  to view single anatomical ROI (say Right-Hippocampus) 
overlaid on MRI image using freeview.How can I achieve this?

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