Re: [Freesurfer] can't load sig.mgh in dev tksurfer
This suggests that the number of values in the .mgh file is different than the number of vertices in the surface. Did you regenerate the surface after generating the .mgh file? On Sun, 2007-05-13 at 15:29 -0400, Catherine Hartley wrote: Hi, I'm having a problem with the development version of tksurfer. When I try to load a sig.mgh file as an overlay, I get the following error: % surfer: couldn't load /Applications/freesurfer/subjects/reruns/ glmleft/ReappCSplusContrast/sig.mgh sclv_read_from_volume: error in FunD_New Thanks, Cate ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Kevin Teich ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Re: [Freesurfer] can't load sig.mgh in dev tksurfer
you can use mri_info on the .mgh file to check (and mris_info on the surface) On Mon, 14 May 2007, Kevin Teich wrote: This suggests that the number of values in the .mgh file is different than the number of vertices in the surface. Did you regenerate the surface after generating the .mgh file? On Sun, 2007-05-13 at 15:29 -0400, Catherine Hartley wrote: Hi, I'm having a problem with the development version of tksurfer. When I try to load a sig.mgh file as an overlay, I get the following error: % surfer: couldn't load /Applications/freesurfer/subjects/reruns/ glmleft/ReappCSplusContrast/sig.mgh sclv_read_from_volume: error in FunD_New Thanks, Cate ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Re: [Freesurfer] can't load sig.mgh in dev tksurfer
Hi, I can't seem to get the syntax right for mri_info or mris_info to work, but i did not regenerate the surfaces after generating the .mgh file, so the number of vertices should be the same. Any other possibilities? Should I just rerun the mri_glmfit that generated the sig.mgh file? -Cate On May 14, 2007, at 11:50 AM, Bruce Fischl wrote: you can use mri_info on the .mgh file to check (and mris_info on the surface) On Mon, 14 May 2007, Kevin Teich wrote: This suggests that the number of values in the .mgh file is different than the number of vertices in the surface. Did you regenerate the surface after generating the .mgh file? On Sun, 2007-05-13 at 15:29 -0400, Catherine Hartley wrote: Hi, I'm having a problem with the development version of tksurfer. When I try to load a sig.mgh file as an overlay, I get the following error: % surfer: couldn't load /Applications/freesurfer/subjects/reruns/ glmleft/ReappCSplusContrast/sig.mgh sclv_read_from_volume: error in FunD_New Thanks, Cate ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Re: [Freesurfer] can't load sig.mgh in dev tksurfer
Hi Cate, there's not much syntax to get write. They take either a volume or a surface file, with the full path. Bruce On Mon, 14 May 2007, Catherine Hartley wrote: Hi, I can't seem to get the syntax right for mri_info or mris_info to work, but i did not regenerate the surfaces after generating the .mgh file, so the number of vertices should be the same. Any other possibilities? Should I just rerun the mri_glmfit that generated the sig.mgh file? -Cate On May 14, 2007, at 11:50 AM, Bruce Fischl wrote: you can use mri_info on the .mgh file to check (and mris_info on the surface) On Mon, 14 May 2007, Kevin Teich wrote: This suggests that the number of values in the .mgh file is different than the number of vertices in the surface. Did you regenerate the surface after generating the .mgh file? On Sun, 2007-05-13 at 15:29 -0400, Catherine Hartley wrote: Hi, I'm having a problem with the development version of tksurfer. When I try to load a sig.mgh file as an overlay, I get the following error: % surfer: couldn't load /Applications/freesurfer/subjects/reruns/ glmleft/ReappCSplusContrast/sig.mgh sclv_read_from_volume: error in FunD_New Thanks, Cate ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
[Freesurfer] can't load sig.mgh in dev tksurfer
Hi, I'm having a problem with the development version of tksurfer. When I try to load a sig.mgh file as an overlay, I get the following error: % surfer: couldn't load /Applications/freesurfer/subjects/reruns/ glmleft/ReappCSplusContrast/sig.mgh sclv_read_from_volume: error in FunD_New Thanks, Cate ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
