[Freesurfer] comparison between two hemisphere in single subject

2016-02-11 Thread Ashkan Faghiri
Hello,

I want to compare the two hemisphere in  one subject (thickness for
example). should I use?

surfreg --s $subject --t fsaverage_sym --lh
surfreg --s $subject --t fsaverage_sym --lh --xhemi

then what? how can I compare the two hemisphere of one subject?

Regards,
Ashkan

-- 
-- 
Ashkan Faghiri
MSc student of Bioelectrical Engineering
Department of Electrical Engineering
Sharif University of Technology
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Re: [Freesurfer] comparison between two hemisphere in single subject

2016-02-11 Thread Douglas N Greve

Follow the further instructions in
https://surfer.nmr.mgh.harvard.edu/fswiki/Xhemi
ie, mris_preproc (which will sample into the common space 
(fsaverage_sym) and compute the difference)
and mris_fwhm, if you want to smooth it. The result will be on 
fsaverage_sym. If you want to map it back to the individual, let me know 
and I can give you instructions


On 02/11/2016 08:25 AM, Ashkan Faghiri wrote:
> Hello,
>
> I want to compare the two hemisphere in  one subject (thickness for 
> example). should I use?
>
> surfreg --s $subject --t fsaverage_sym --lh
> surfreg --s $subject --t fsaverage_sym --lh --xhemi
>
> then what? how can I compare the two hemisphere of one subject?
>
> Regards,
> Ashkan
>
> -- 
> -- 
> Ashkan Faghiri
> MSc student of Bioelectrical Engineering
> Department of Electrical Engineering
> Sharif University of Technology
>
>
>
>
>
> ___
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- 
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MGH-NMR Center
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