Re: [Freesurfer] gzip: stdin: unexpected end of file
I just did a test download on my home network and I got the correct sha 1723ef916c4e74ee8fff72438e9c6c91c79bd4cb freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz Perhaps your network times out after a certain time period, or has a cap on the file size? > sha1sum freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz returns > da39a3ee5e6b4b0d3255bfef95601890afd80709 > > A corrupted download three times! Do I just try downloading again? > > On Thu, Feb 23, 2017 at 9:02 AM <freesurfer-requ...@nmr.mgh.harvard.edu> > wrote: > >> Send Freesurfer mailing list submissions to >> freesurfer@nmr.mgh.harvard.edu >> >> To subscribe or unsubscribe via the World Wide Web, visit >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> or, via email, send a message with subject or body 'help' to >> freesurfer-requ...@nmr.mgh.harvard.edu >> >> You can reach the person managing the list at >> freesurfer-ow...@nmr.mgh.harvard.edu >> >> When replying, please edit your Subject line so it is more specific >> than "Re: Contents of Freesurfer digest..." >> Today's Topics: >> >>1. No FTP Access (Rockers, Elijah D.) >>2. Re: No FTP Access (Rockers, Elijah D.) >>3. Re: gzip: stdin: unexpected end of file (Z K) >>4. Re: Re-running after Base Image Edits (Steros) >>5. Re: FS 6.0 Freeview (peng) >>6. Re: FS 6.0 Freeview (Kevin Aquino) >>7. Virtualbox for FS v6.0 ? (Randolph Andrews) >>8. recon-all error (6.0) (Trisanna Sprung-Much) >>9. deformation fields (Worker, Amanda) >> 10. How to output particular area from stats subdir (Jing Gu) >> >> >> >> -- Forwarded message -- >> From: "Rockers, Elijah D." <edrock...@houstonmethodist.org> >> To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu> >> Cc: >> Bcc: >> Date: Wed, 22 Feb 2017 17:22:06 + >> Subject: [Freesurfer] No FTP Access >> Is there by any chance another way to download Freesurfer? My >> institution does not allow FTP connections (HIPPA...) Same goes for the >> tutorial data, but obviously Freesurfer is the priority here... thanks. >> >> - Eli >> >> Houston Methodist. Leading Medicine. >> >> U.S. News & World Report has recognized Houston Methodist as one of the >> nationâs top 20 hospitals, placing it for the second time on the >> magazineâs >> prestigious Honor Roll. It is also designated as a Magnet hospital for >> excellence in nursing. Visit us at houstonmethodist.org. Follow us at >> twitter.com/MethodistHosp and www.facebook.com/HoustonMethodist. >> >> ***CONFIDENTIALITY NOTICE*** This e-mail is the property of Houston >> Methodist Hospital and/or its relevant affiliates and may contain >> restricted and privileged material for the sole use of the intended >> recipient(s). Any review, use, distribution or disclosure by others is >> strictly prohibited. If you are not the intended recipient (or >> authorized >> to receive for the recipient), please contact the sender and delete all >> copies of the message. Thank you. >> >> >> >> >> >> -- Forwarded message -- >> From: "Rockers, Elijah D." <edrock...@houstonmethodist.org> >> To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu> >> Cc: >> Bcc: >> Date: Wed, 22 Feb 2017 17:24:23 + >> Subject: Re: [Freesurfer] No FTP Access >> Nevermind. I discovered if I just change ftp to https in the download >> link, it works fine. >> - Eli >> >> On Wed, 2017-02-22 at 12:22 -0500, Elijah Rockers wrote: >> > Is there by any chance another way to download Freesurfer? My >> > institution does not allow FTP connections (HIPPA...) Same goes for >> the >> > tutorial data, but obviously Freesurfer is the priority here... >> thanks. >> > >> > - Eli >> >> >> Houston Methodist. Leading Medicine. >> >> U.S. News & World Report has recognized Houston Methodist as one of the >> nationâs top 20 hospitals, placing it for the second time on the >> magazineâs >> prestigious Honor Roll. It is also designated as a Magnet hospital for >> excellence in nursing. Visit us at houstonmethodist.org. Follow us at >> twitter.com/MethodistHosp and www.facebook.com/HoustonMethodist. >> >> ***CONFIDENTIALITY NOTICE*** This e-mail is the property of Houston >> Methodist Hospital and/or its relevant affiliates and
Re: [Freesurfer] gzip: stdin: unexpected end of file
sha1sum freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz returns da39a3ee5e6b4b0d3255bfef95601890afd80709 A corrupted download three times! Do I just try downloading again? On Thu, Feb 23, 2017 at 9:02 AM <freesurfer-requ...@nmr.mgh.harvard.edu> wrote: > Send Freesurfer mailing list submissions to > freesurfer@nmr.mgh.harvard.edu > > To subscribe or unsubscribe via the World Wide Web, visit > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > or, via email, send a message with subject or body 'help' to > freesurfer-requ...@nmr.mgh.harvard.edu > > You can reach the person managing the list at > freesurfer-ow...@nmr.mgh.harvard.edu > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Freesurfer digest..." > Today's Topics: > >1. No FTP Access (Rockers, Elijah D.) >2. Re: No FTP Access (Rockers, Elijah D.) >3. Re: gzip: stdin: unexpected end of file (Z K) >4. Re: Re-running after Base Image Edits (Steros) >5. Re: FS 6.0 Freeview (peng) >6. Re: FS 6.0 Freeview (Kevin Aquino) >7. Virtualbox for FS v6.0 ? (Randolph Andrews) >8. recon-all error (6.0) (Trisanna Sprung-Much) >9. deformation fields (Worker, Amanda) > 10. How to output particular area from stats subdir (Jing Gu) > > > > -- Forwarded message -- > From: "Rockers, Elijah D." <edrock...@houstonmethodist.org> > To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu> > Cc: > Bcc: > Date: Wed, 22 Feb 2017 17:22:06 + > Subject: [Freesurfer] No FTP Access > Is there by any chance another way to download Freesurfer? My > institution does not allow FTP connections (HIPPA...) Same goes for the > tutorial data, but obviously Freesurfer is the priority here... thanks. > > - Eli > > Houston Methodist. Leading Medicine. > > U.S. News & World Report has recognized Houston Methodist as one of the > nation’s top 20 hospitals, placing it for the second time on the magazine’s > prestigious Honor Roll. It is also designated as a Magnet hospital for > excellence in nursing. Visit us at houstonmethodist.org. Follow us at > twitter.com/MethodistHosp and www.facebook.com/HoustonMethodist. > > ***CONFIDENTIALITY NOTICE*** This e-mail is the property of Houston > Methodist Hospital and/or its relevant affiliates and may contain > restricted and privileged material for the sole use of the intended > recipient(s). Any review, use, distribution or disclosure by others is > strictly prohibited. If you are not the intended recipient (or authorized > to receive for the recipient), please contact the sender and delete all > copies of the message. Thank you. > > > > > > -- Forwarded message -- > From: "Rockers, Elijah D." <edrock...@houstonmethodist.org> > To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu> > Cc: > Bcc: > Date: Wed, 22 Feb 2017 17:24:23 + > Subject: Re: [Freesurfer] No FTP Access > Nevermind. I discovered if I just change ftp to https in the download > link, it works fine. > - Eli > > On Wed, 2017-02-22 at 12:22 -0500, Elijah Rockers wrote: > > Is there by any chance another way to download Freesurfer? My > > institution does not allow FTP connections (HIPPA...) Same goes for the > > tutorial data, but obviously Freesurfer is the priority here... thanks. > > > > - Eli > > > Houston Methodist. Leading Medicine. > > U.S. News & World Report has recognized Houston Methodist as one of the > nation’s top 20 hospitals, placing it for the second time on the magazine’s > prestigious Honor Roll. It is also designated as a Magnet hospital for > excellence in nursing. Visit us at houstonmethodist.org. Follow us at > twitter.com/MethodistHosp and www.facebook.com/HoustonMethodist. > > ***CONFIDENTIALITY NOTICE*** This e-mail is the property of Houston > Methodist Hospital and/or its relevant affiliates and may contain > restricted and privileged material for the sole use of the intended > recipient(s). Any review, use, distribution or disclosure by others is > strictly prohibited. If you are not the intended recipient (or authorized > to receive for the recipient), please contact the sender and delete all > copies of the message. Thank you. > > > > > > -- Forwarded message -- > From: Z K <zkauf...@nmr.mgh.harvard.edu> > To: freesurfer@nmr.mgh.harvard.edu > Cc: > Bcc: > Date: Wed, 22 Feb 2017 12:54:38 -0500 > Subject: Re: [Freesurfer] gzip: stdin: unexpected end of file > Its probably a corrupted download. What do you get when type
Re: [Freesurfer] gzip: stdin: unexpected end of file
Its probably a corrupted download. What do you get when type 'sha1sum freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz'? $> sha1sum freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz 1723ef916c4e74ee8fff72438e9c6c91c79bd4cb You should get the 1723ef... number from above. On 02/21/2017 07:27 PM, Kambiz Tavabi wrote: > > After downloading CentOS 6 x86_64 (64b) stable v6.0.0 unzipping on Ubunt > 16.04 (64b) machine with > > tar -C /usr/local -xzvf > freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz > > Returns an error: > gzip: stdin: unexpected end of file > tar: Child returned status 1 > tar: Error is not recoverable: exiting now > > Is there a way around this? > > > > Kambiz Tavabi PhD > Institute for Learning & Brain Sciences > 1715 Columbia Road N > Portage Bay Building > Box 357988 > University of Washington > Seattle, WA 98195-7988 > Tel: 206-685-6173 > > > /Confidentiality Notice: Because email is not secure, please be aware > that we cannot guarantee the confidentiality of information sent by > email. If you are not the intended recipient of this email, please > notify the sender by reply email, and then destroy all copies of the > message and any attachments./ > > > ___ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
[Freesurfer] gzip: stdin: unexpected end of file
After downloading CentOS 6 x86_64 (64b) stable v6.0.0 unzipping on Ubunt 16.04 (64b) machine with tar -C /usr/local -xzvf freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz Returns an error: gzip: stdin: unexpected end of file tar: Child returned status 1 tar: Error is not recoverable: exiting now Is there a way around this? Kambiz Tavabi PhD Institute for Learning & Brain Sciences 1715 Columbia Road N Portage Bay Building Box 357988 University of Washington Seattle, WA 98195-7988 Tel: 206-685-6173 *Confidentiality Notice: Because email is not secure, please be aware that we cannot guarantee the confidentiality of information sent by email. If you are not the intended recipient of this email, please notify the sender by reply email, and then destroy all copies of the message and any attachments.* ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
