Re: [Freesurfer] mri_segment_hypothalamic_subunits error: Illegal instruction 4

2022-03-27 Thread Douglas N. Greve
You're command line is incomplete (it needs more than just --s). Run it 
with --help and/or visit the wiki page


On 3/23/2022 2:40 PM, Alice Tao wrote:


External Email - Use Caution

Thank you so much for the response! Unfortunately, that is the full 
command line and output:


$ mri_segment_hypothalamic_subunits --s
Illegal instruction: 4

*From:* freesurfer-boun...@nmr.mgh.harvard.edu 
 on behalf of Iglesias 
Gonzalez, Juan E. 

*Sent:* Wednesday, March 23, 2022 10:51 AM
*To:* Freesurfer support list 
*Subject:* [EXTERNAL] Re: [Freesurfer] 
mri_segment_hypothalamic_subunits error: Illegal instruction 4

Dear Alice,

Can you please send us your full command line and output?

Cheers,

/E


Juan Eugenio Iglesias
*MailScanner has detected a possible fraud attempt from 
"secure-web.cisco.com" claiming to be* http://www.jeiglesias.com 
<https://secure-web.cisco.com/1C2KpU9odm7EO2L906_06xrO3Z-MsifcrEe-OQgSLF8HanqeZ2YQ1Kmfej6PpsyHzt6H9WR4ZFrbQetPuGDusDMFfgxozoIzXnB9Hb-J1E5Z_jL6Qz-e-SIjhhfIdWEw27cKlCeQBOZm0KjTNHczrCqDpz0V5hJwoNJ_85u7r3sv34VBBcu654NfJ39nXnPJfUrOlcL6ScW_-DckHTdgc4Jnk0nsYAFR6reppEWRI3PU3hWN4H2HPHD0lls_ApImRUpysgawAmQH4QmYryPz1jA36NKqdMnwqjMfua0TJCR7EFD8RYywzZ-AY_Tg0WxJ4/https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttp-3A__www.jeiglesias.com%26d%3DDwMFAg%26c%3Dlb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s%26r%3DIujVNinL39oXFTBF1T9Z2Rk1Ua_29BuYuocLBTMwY64%26m%3Dv6DnJ4t8W0RIDuNYnRVL1C1fPzedTXtCVgGnnuu_hkh9dAkD3nTKzFReFukkp_w3%26s%3D6V3m89xQuP3goeB5ZkWv_M1HKJkaEFwXJCBRcAET5bM%26e%3D> 




On Mar 23, 2022, at 10:41, Alice Tao  wrote:

External Email - Use Caution

Hello FreeSurfer Developers,

I'm attempting to use the mri_segment_hypothalamic_subunits tool on 
subjects that have been analyzed with recon-all as described on the 
wiki page (*MailScanner has detected a possible fraud attempt from 
"secure-web.cisco.com" claiming to be* 
https://surfer.nmr.mgh.harvard.edu/fswiki/HypothalamicSubunits 
<https://secure-web.cisco.com/1O9nRcqDjOXFZOE2PsG3cr4yvli6DyccMMXsJwVDnbHY6iDBWFCIw0TBZ9PoYv2lnOCkVStFq2n1MQsE852tmIDB4k8MLmQjnkSw7n8tSMRd4gSMpJSbqWfqUViGXA-oHPT3GxEJS1h2kpFcerJcm527rKWxww4S309XOFU07qgP09TiQBEtY7-SiJtnP3AaVeBf6eZnlLnE3FRDwnv9cKYGMgDhPGxU_ZeLu5HPrJ19VYu1yW50apV-uUjfik1Z5rtB9lkOftksb5NAyHWxABEveSYk8Or-6ckfMUyZtEODNaP8O4xfxDHo8MfoFBtv3/https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__surfer.nmr.mgh.harvard.edu_fswiki_HypothalamicSubunits%26d%3DDwMFAg%26c%3Dlb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s%26r%3DIujVNinL39oXFTBF1T9Z2Rk1Ua_29BuYuocLBTMwY64%26m%3Dv6DnJ4t8W0RIDuNYnRVL1C1fPzedTXtCVgGnnuu_hkh9dAkD3nTKzFReFukkp_w3%26s%3DNvuub_YARcy4KGLMuK7jkddI5gkWMygtJGe1bQE10vU%26e%3D>), 
but I received the following error when I run the 
mri_segment_hypothalamic_subunits command 
(mri_segment_hypothalamic_subunits--s):


  Illegal instruction: 4

Does anyone have any suggestions on how to trouble-shoot this 
problem? recon-all does not seem to have any issues.


1) FreeSurfer version: freesurfer-darwin-macOS-7.2.0-20210713-aa8f76b
2) Platform: macOS Monterey, version 12.2.1

Thank you!
Alice
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
*MailScanner has detected a possible fraud attempt from 
"secure-web.cisco.com" claiming to be* 
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer 
<https://secure-web.cisco.com/1nb2Mwy3xls17Y3IkwXk54R-pBBBpJd5DglfGe6WkqorNuHvk7yYcUbtGn9UC3ajsSKI1GdeKjUKA6AGW4NTfp9eFXBZ3Vwb09hHHo3WfKaEOesa4yCyNVmAf901fSrGV0eSBXpZ7Hxq1xC5k1GXnuezX1dG61wq66Gru4_H6-9cvJJjLQZ0-5Hq4yexj0VAPvEj6FLiJy6F5aUbSM0MoXdbWAtRjMSgfZBuPogsLm8X_Y1xRg5Tgc_0aEEcrVVVtezoHsBa89YX03Ap0tpM_P3IpeNaChKPW2uzSoRJjJNDMNJvZuQ6uUEJtBgTah8z8/https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__mail.nmr.mgh.harvard.edu_mailman_listinfo_freesurfer%26d%3DDwMFAg%26c%3Dlb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s%26r%3DIujVNinL39oXFTBF1T9Z2Rk1Ua_29BuYuocLBTMwY64%26m%3Dv6DnJ4t8W0RIDuNYnRVL1C1fPzedTXtCVgGnnuu_hkh9dAkD3nTKzFReFukkp_w3%26s%3DAPqkcYlUmUCiTqlgSUgcMs9ouE3c-hmao7G2nBLKWzg%26e%3D>



___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is 
addressed.  If you believe this e-mail was sent to you in error and the e-mail 
contains patient information, please contact the Mass General Brigham 
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline 
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted).  If you do not wish to 
continue communication over unencry

Re: [Freesurfer] mri_segment_hypothalamic_subunits error: Illegal instruction 4

2022-03-23 Thread Iglesias Gonzalez, Juan E.
Dear Alice,

Can you please send us your full command line and output?

Cheers,

/E


Juan Eugenio Iglesias
http://www.jeiglesias.com

On Mar 23, 2022, at 10:41, Alice Tao 
mailto:ajt4...@med.cornell.edu>> wrote:

External Email - Use Caution

Hello FreeSurfer Developers,

I'm attempting to use the mri_segment_hypothalamic_subunits tool on subjects 
that have been analyzed with recon-all as described on the wiki page 
(https://surfer.nmr.mgh.harvard.edu/fswiki/HypothalamicSubunits), but I 
received the following error when I run the mri_segment_hypothalamic_subunits 
command (mri_segment_hypothalamic_subunits--s):

  Illegal instruction: 4

Does anyone have any suggestions on how to trouble-shoot this problem? 
recon-all does not seem to have any issues.

1) FreeSurfer version: freesurfer-darwin-macOS-7.2.0-20210713-aa8f76b
2) Platform: macOS Monterey, version 12.2.1

Thank you!
Alice
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is 
addressed.  If you believe this e-mail was sent to you in error and the e-mail 
contains patient information, please contact the Mass General Brigham 
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline 
 .
Please note that this e-mail is not secure (encrypted).  If you do not wish to 
continue communication over unencrypted e-mail, please notify the sender of 
this message immediately.  Continuing to send or respond to e-mail after 
receiving this message means you understand and accept this risk and wish to 
continue to communicate over unencrypted e-mail.