Re: [Freesurfer] tkmedit on ssh remote machine error
Jon, I have not seen or heard of this error before... are both machines Mac OSX 10.6.8? Also, will the same command will produce a brain image when not logged in remotely? -Zeke On 05/30/2013 12:43 PM, Jon Wieser wrote: hi freesurfer folks I'm ssh'ing to from one MAc to another X11 is on both machines MAC OS X 10.6.8 When I start TKmedit with: (freesurfer files are in the freesurfer directory) tkmedit freesurfer brainmask.mgz -aux T1.mgz I get the errors: Thu May 30 11:34:50 cerebrum.uwm.edu tkmedit.bin[78500] Error: kCGErrorIllegalArgument: _CGSFindSharedWindow: WID 349 Thu May 30 11:34:50 cerebrum.uwm.edu tkmedit.bin[78500] Error: kCGErrorFailure: Set a breakpoint @ CGErrorBreakpoint() to catch errors as they are logged. Thu May 30 11:34:50 cerebrum.uwm.edu tkmedit.bin[78500] Error: kCGErrorIllegalArgument: CGSSetWindowSendExposed: Invalid window 0x15d Thu May 30 11:34:50 cerebrum.uwm.edu tkmedit.bin[78500] Error: unknown error code: invalid drawable error: xp_attach_gl_context returned: 2 tkmedit GUI opens and the image window opens, but the image window is blank (white) , (no image of the brain) i have set X11forwarding to yes in the /etc/sshd_config file so xeyes works ok remotely Jon ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] tkmedit on ssh remote machine error
both machines have Mac OS X 10.6.8 the tkmedit works fine when not logged in remotely there is no error and the brain image is there Jon - Original Message - From: Z K zkauf...@nmr.mgh.harvard.edu To: Jon Wieser wie...@uwm.edu Cc: freesurfer freesurfer@nmr.mgh.harvard.edu Sent: Thursday, May 30, 2013 12:16:55 PM Subject: Re: [Freesurfer] tkmedit on ssh remote machine error Jon, I have not seen or heard of this error before... are both machines Mac OSX 10.6.8? Also, will the same command will produce a brain image when not logged in remotely? -Zeke On 05/30/2013 12:43 PM, Jon Wieser wrote: hi freesurfer folks I'm ssh'ing to from one MAc to another X11 is on both machines MAC OS X 10.6.8 When I start TKmedit with: (freesurfer files are in the freesurfer directory) tkmedit freesurfer brainmask.mgz -aux T1.mgz I get the errors: Thu May 30 11:34:50 cerebrum.uwm.edu tkmedit.bin[78500] Error: kCGErrorIllegalArgument: _CGSFindSharedWindow: WID 349 Thu May 30 11:34:50 cerebrum.uwm.edu tkmedit.bin[78500] Error: kCGErrorFailure: Set a breakpoint @ CGErrorBreakpoint() to catch errors as they are logged. Thu May 30 11:34:50 cerebrum.uwm.edu tkmedit.bin[78500] Error: kCGErrorIllegalArgument: CGSSetWindowSendExposed: Invalid window 0x15d Thu May 30 11:34:50 cerebrum.uwm.edu tkmedit.bin[78500] Error: unknown error code: invalid drawable error: xp_attach_gl_context returned: 2 tkmedit GUI opens and the image window opens, but the image window is blank (white) , (no image of the brain) i have set X11forwarding to yes in the /etc/sshd_config file so xeyes works ok remotely Jon ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. -- Jon Wieser Research Specialist UW-Milwaukee Psychology Department, Pearse Hall Rm 366 2441 East Hartford Ave Milwaukee, WI 53211 Phone: 414-229-7145 Fax: 414-229-5219 ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Re: [Freesurfer] tkmedit on ssh remote machine error
On Thu, May 30, 2013 at 2:37 PM, Jon Wieser wie...@uwm.edu wrote: both machines have Mac OS X 10.6.8 the tkmedit works fine when not logged in remotely there is no error and the brain image is there Did you do ssh -Y or have ForwardX11Trusted yes in your ssh.config? Richard ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] tkmedit on ssh remote machine error
yes, I have ForwardX11Trusted yes in ssh_config and I do ssh -Y Jon - Original Message - From: R Edgar freesurfer@gmail.com To: Jon Wieser wie...@uwm.edu Cc: Z K zkauf...@nmr.mgh.harvard.edu, freesurfer freesurfer@nmr.mgh.harvard.edu Sent: Thursday, May 30, 2013 3:26:05 PM Subject: Re: [Freesurfer] tkmedit on ssh remote machine error On Thu, May 30, 2013 at 2:37 PM, Jon Wieser wie...@uwm.edu wrote: both machines have Mac OS X 10.6.8 the tkmedit works fine when not logged in remotely there is no error and the brain image is there Did you do ssh -Y or have ForwardX11Trusted yes in your ssh.config? Richard -- Jon Wieser Research Specialist UW-Milwaukee Psychology Department, Pearse Hall Rm 366 2441 East Hartford Ave Milwaukee, WI 53211 Phone: 414-229-7145 Fax: 414-229-5219 ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
