re: [Freesurfer] Newbie and some question

2005-06-27 Thread Kevin Teich
Thanks a lot. Those really help. However, I don't have the root 
permission to install those libraries into the required directory. So, I 
guess that I should use the static version of tkmedit and tksurfer. 
Could you show me where I can find them? Thanks again.


Sorry, but we don't distribute a static version any more. You'll have to 
install tcl/tk 8.3.






Best, Thanh

--- Bell, Andrew (NIH/NIMH) [EMAIL PROTECTED]
wrote:


Thanh Ngo,

Welcome to FreeSurfer :)  I'm no expert but maybe I
can help.

I had the same problem (many people have) with the
libtk8.3.so and
libtcl8.3so libraries (I assume you're getting a
shared library error).

Before you try to get the static version to work,
try this:

Have you searched your computer for these files?
FreeSurfer seems to want
them to be in the /usr/lib directory.  If you have
these files but they are
in a different directory, create a symbolic link to
them:

e.g., if the files are in /opt/tcltk/lib

cd /usr/lib
ln -s /opt/tcltk/lib/libtk8.3.so libtk8.3.so
ln -s /opt/tcltk/lib/libtcl8.3.so libtcl8.3.so


If you don't have these files, you should download
them (make sure you get
version 8.3.x!).  If you look on the FreeSurfer
Download page, there is a
link below the table with the main downloads that
takes you to the most
up-to-date binaries.  I believe these files are
posted there.

If you have newer versions of tcl/tk (e.g., 8.4 or
8.5), you need to install
the older versions as well (make sure to FORCE the
install) -- at least this
was the only way I could get it to work.


Hope this helps!

Andy



Andrew H. Bell, PhD
Laboratory of Brain and Cognition
National Institute of Mental Health
Bethesda, Maryland USA
O: (301) 496-5625 x260
[EMAIL PROTECTED]









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--
Kevin Teich

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re: [Freesurfer] Newbie and some question

2005-06-27 Thread Bruce Fischl
you don't need to be root (although it seems like you should be able to 
get a sysadmin to install them somewhere). In any case, you can change your 
LD_LIBRARY_PATH to include whereever you have installed them.


cheers,
Bruce

On Mon, 27 Jun 2005, Kevin Teich 
wrote:


Thanks a lot. Those really help. However, I don't have the root permission 
to install those libraries into the required directory. So, I guess that I 
should use the static version of tkmedit and tksurfer. Could you show me 
where I can find them? Thanks again.


Sorry, but we don't distribute a static version any more. You'll have to 
install tcl/tk 8.3.






Best, Thanh

--- Bell, Andrew (NIH/NIMH) [EMAIL PROTECTED]
wrote:


Thanh Ngo,

Welcome to FreeSurfer :)  I'm no expert but maybe I
can help.

I had the same problem (many people have) with the
libtk8.3.so and
libtcl8.3so libraries (I assume you're getting a
shared library error).

Before you try to get the static version to work,
try this:

Have you searched your computer for these files?
FreeSurfer seems to want
them to be in the /usr/lib directory.  If you have
these files but they are
in a different directory, create a symbolic link to
them:

e.g., if the files are in /opt/tcltk/lib

cd /usr/lib
ln -s /opt/tcltk/lib/libtk8.3.so libtk8.3.so
ln -s /opt/tcltk/lib/libtcl8.3.so libtcl8.3.so


If you don't have these files, you should download
them (make sure you get
version 8.3.x!).  If you look on the FreeSurfer
Download page, there is a
link below the table with the main downloads that
takes you to the most
up-to-date binaries.  I believe these files are
posted there.

If you have newer versions of tcl/tk (e.g., 8.4 or
8.5), you need to install
the older versions as well (make sure to FORCE the
install) -- at least this
was the only way I could get it to work.


Hope this helps!

Andy



Andrew H. Bell, PhD
Laboratory of Brain and Cognition
National Institute of Mental Health
Bethesda, Maryland USA
O: (301) 496-5625 x260
[EMAIL PROTECTED]









Yahoo! Sports
Rekindle the Rivalries. Sign up for Fantasy Football
http://football.fantasysports.yahoo.com
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer





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