[galaxy-dev] adding IDR to Amazon AMI

2012-06-16 Thread Quang Trinh 
Hi dev,
Just wondering if there is plan to add IDR ( please see the link
below ) to Galaxy Amazon AMI?

https://sites.google.com/site/anshulkundaje/projects/idr

 IDR is being used by both modENCODE and ENCODE projects for ChiP-seq analysis.

Thanks,

Q
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Re: [galaxy-dev] Python revs for latest Galaxy and new Cloudman ?

2012-06-16 Thread Enis Afgan 
Hi Greg,
On my laptop, I run Python 2.7.1 and as much as one can test things
locally, things are working fine. The version on the AMI you mention is
obviously working fine so I'd say that there shouldn't be any surprises
arising from the different Python versions.

Cheers,
Enis

On Fri, Jun 15, 2012 at 6:21 PM, Greg Edwards gedwar...@gmail.com wrote:

 Hi,

 Just checking before I plunge in and upgrade various things. Is the latest
 Galaxy and Cloudman ( http://wiki.g2.bx.psu.edu/News/NewCloudManRelease )
 ok on Python 2.7.3 ?

 And can I ask what Python rev is incorporated in the new Cloudman AMI ?
 Presumably a little earlier than 2.7.3. My current 
 861460482541/galaxy-cloudman-2011-03-22
 is Python 2.6.5. Current local Mac is 2.6.1.

 Sorry about somewhat dim questions. I'm starting a big Python learning
 binge and want to set up a local Galaxy on Mac, an AWS Galaxy, and a
 learning environment
 in the most useful way.

 Thanks.

 --
 Greg Edwards,
 Port Jackson Bioinformatics
 gedwar...@gmail.com


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