[galaxy-dev] Stable Galaxy to install.

2013-09-11 Thread cngbgal...@gmail.com
Hi everyone,
I want to install my local Galaxy,and I don't know which version is more stable 
and work well.Could anyone give same advise?Thank you very much. 




cngbgal...@gmail.com___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Re: [galaxy-dev] Stable Galaxy for local install

2013-09-11 Thread cngbgal...@gmail.com
Hi all,
What I want to do in a hurry is to fix the problem of Select in Filter and 
Sort .It is a step very important for me to Sort SAM file for Cufflinks.Thank 
you very much for all of your help.




cngbgalaxy

From: Adam Brenner
Date: 2013-09-12 00:41
To: cngbgalaxy
CC: joachim.jacob; galaxy-dev@lists.bx.psu.edu; galaxy-...@bx.psu.edu
Subject: Re: [galaxy-dev] Stable Galaxy for local install
Galaxy development occurs in two repositories, galaxy-central and
galaxy-dist. Changes are stabilized in galaxy-central and then pushed
to galaxy-dist roughly once a month.[1]

So

$ hg clone https://bitbucket.org/galaxy/galaxy-dist/
$ cd galaxy-dist
$ hg update stable

[1]: http://wiki.galaxyproject.org/Admin/Get%20Galaxy

--
Adam Brenner
Computer Science, Undergraduate Student
Donald Bren School of Information and Computer Sciences

Research Computing Support
Office of Information Technology
http://www.oit.uci.edu/rcs/

University of California, Irvine
www.ics.uci.edu/~aebrenne/
aebre...@uci.edu


On Wed, Sep 11, 2013 at 8:42 AM, cngbgalaxy cngbgal...@gmail.com wrote:
 Hi Joachim,
 Thank you very much for your help.
 Actually I find some problems about such versions of Galaxy in
 https://bitbucket.org/galaxy/galaxy-dist/downloads .
 We can not view the data in history by clicking the eyes icon on the
 c42567f43aa7 version.The Select in Filter and Sort fail to work on the
 1ae95b3aa98d (release_2013.08.12 ) version and the 524f246ca853
 (release_2013.06.03 ),though I don't know whether it is a bug or not.
 As a result,I feel confused about which version of Galaxy to install and
 avoid the above problems.

 
 cngbgalaxy

 From: Joachim Jacob | VIB |
 Date: 2013-09-11 22:38
 To: test galaxy
 CC: galaxy-dev; galaxy-dev
 Subject: Re: [galaxy-dev] Stable Galaxy for local install
 The latest code from the 'stable' branch of Galaxy is preferred. See the
 news brief accompanying the update (release_2013.08.12) on
 http://wiki.galaxyproject.org/DevNewsBriefs/2013_08_12

 You need mercurial (http://mercurial.selenic.com/) for installing
 Galaxy. Report bugs at https://trello.com/b/75c1kASa/galaxy-development

 Cheers
 Joachim

 Joachim Jacob
 Contact details: http://www.bits.vib.be/index.php/about/80-team


 On 09/11/2013 03:55 AM, test galaxy wrote:
 Hi everyone,
 I want to install my local Galaxy with less bugs,and I don't know
 which version is more stable and work well.Could anyone give same
 advise?Thank you very much.


 ___
 Please keep all replies on the list by using reply all
 in your mail client.  To manage your subscriptions to this
 and other Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/

 To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/


 ___
 Please keep all replies on the list by using reply all
 in your mail client.  To manage your subscriptions to this
 and other Galaxy lists, please use the interface at:
   http://lists.bx.psu.edu/

 To search Galaxy mailing lists use the unified search at:
   http://galaxyproject.org/search/mailinglists/___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/