My fault. I did not set a title for it.
(Anyway this should be caught I think.)
regards, Andreas
On 25.10.2012 13:18, Andreas Kuntzagk wrote:
Hi,
on our local Galaxy instance I try to setup Visualization.
I followed
http://wiki.g2.bx.psu.edu/Learn/Visualization#Setup_for_Local_Instances
But when I try to create a new visalization I get an error with this traceback:
URL: http://bbc.mdc-berlin.de/galaxy/visualization/create
File
'/data/galaxy/galaxy-dist/eggs/WebError-0.8a-py2.6.egg/weberror/evalexception/middleware.py',
line 364 in respond
app_iter = self.application(environ, detect_start_response)
File '/data/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/debug/prints.py',
line 98 in __call__
environ, self.app)
File '/data/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/wsgilib.py', line
539 in intercept_output
app_iter = application(environ, replacement_start_response)
File '/data/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/recursive.py',
line 80 in __call__
return self.application(environ, start_response)
File
'/data/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/httpexceptions.py',
line 632 in __call__
return self.application(environ, start_response)
File '/data/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 160 in
__call__
body = method( trans, **kwargs )
File '/data/galaxy/galaxy-dist/lib/galaxy/web/framework/__init__.py', line 93
in decorator
return func( self, trans, *args, **kwargs )
File
'/data/galaxy/galaxy-dist/lib/galaxy/webapps/galaxy/controllers/visualization.py',
line 590 in
create
type=visualization_type )
File '/data/galaxy/galaxy-dist/lib/galaxy/web/base/controller.py', line 343 in
create_visualization
revision = trans.model.VisualizationRevision( visualization=visualization,
title=title,
config=config, dbkey=dbkey )
File 'string', line 4 in __init__
File
'/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/state.py',
line 82 in initialize_instance
return manager.events.original_init(*mixed[1:], **kwargs)
File '/data/galaxy/galaxy-dist/lib/galaxy/model/__init__.py', line 2764 in
__init__
self.visualization = visualization
File
'/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/attributes.py',
line 150 in __set__
self.impl.set(instance_state(instance), instance_dict(instance), value, None)
File
'/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/attributes.py',
line 590 in set
value = self.fire_replace_event(state, dict_, value, old, initiator)
File
'/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/attributes.py',
line 610 in fire_replace_event
value = ext.set(state, value, previous, initiator or self)
File
'/data/galaxy/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.6.egg/sqlalchemy/orm/attributes.py',
line 847 in set
new_state, new_dict = instance_state(child), instance_dict(child)
AttributeError: 'dict' object has no attribute '_sa_instance_state'
Any idea what may be wrong?
regards, Andreas
--
Andreas Kuntzagk
SystemAdministrator
Berlin Institute for Medical Systems Biology at the
Max-Delbrueck-Center for Molecular Medicine
Robert-Roessle-Str. 10, 13125 Berlin, Germany
http://www.mdc-berlin.de/en/bimsb/BIMSB_groups/Dieterich
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