Re: [galaxy-dev] Does anybody know if ts (a task scheduler) is supported under Galaxy.
Hi Hans-Rudolph, I am grateful to you (and all the other people who share their knowledge on this list) for pointing out a ready made, in-built solution to what I perceived as a problem. Many thanks, Shane >Hi Shane, > > >please allow me to jump in late - since you are looking for a simple >solution: why not rely just on the built in job scheduler? Have a look >at ~/config/job_conf.xml.sample_advanced > >Even on a single box, you can set up different queues with individual >restrictions. > >Hans-Rudolf > > > >On 11/24/2015 06:48 PM, Eric Rasche wrote: >> I'd also recommend HTCondor. >> Very easy to set up on debian/ubuntu, apt-get has a quick >> questionnaire that gets you up and running. >> >> Cheers, >> Eric >> >> On 11/24/2015 11:46 AM, Björn Grüning wrote: >>> Hi Shane, >>> >>> would Slurm work for you? >>> >>> http://slurm.schedmd.com/ >>> >>> Cheers, >>> Bjoern >>> >>> Am 24.11.2015 um 13:12 schrieb Shane Kelly: Hi, I am looking for a simple task scheduler to use with Galaxy and initially picked Torque, but since my server is a single box, Torque would appear to be overkill? Can I have any input from anyone who may have used it? Thanks for any response ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ >>> ___ >>> Please keep all replies on the list by using "reply all" >>> in your mail client. To manage your subscriptions to this >>> and other Galaxy lists, please use the interface at: >>>https://lists.galaxyproject.org/ >>> >>> To search Galaxy mailing lists use the unified search at: >>>http://galaxyproject.org/search/mailinglists/ >>> >> ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Re: [galaxy-dev] Does anybody know if ts (a task scheduler) is supported under Galaxy.
Hi Shane, please allow me to jump in late - since you are looking for a simple solution: why not rely just on the built in job scheduler? Have a look at ~/config/job_conf.xml.sample_advanced Even on a single box, you can set up different queues with individual restrictions. Hans-Rudolf On 11/24/2015 06:48 PM, Eric Rasche wrote: I'd also recommend HTCondor. Very easy to set up on debian/ubuntu, apt-get has a quick questionnaire that gets you up and running. Cheers, Eric On 11/24/2015 11:46 AM, Björn Grüning wrote: Hi Shane, would Slurm work for you? http://slurm.schedmd.com/ Cheers, Bjoern Am 24.11.2015 um 13:12 schrieb Shane Kelly: Hi, I am looking for a simple task scheduler to use with Galaxy and initially picked Torque, but since my server is a single box, Torque would appear to be overkill? Can I have any input from anyone who may have used it? Thanks for any response ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
[galaxy-dev] Does anybody know if ts (a task scheduler) is supported under Galaxy.
Hi, I am looking for a simple task scheduler to use with Galaxy and initially picked Torque, but since my server is a single box, Torque would appear to be overkill? Can I have any input from anyone who may have used it? Thanks for any response ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Re: [galaxy-dev] Does anybody know if ts (a task scheduler) is supported under Galaxy.
I'd also recommend HTCondor. Very easy to set up on debian/ubuntu, apt-get has a quick questionnaire that gets you up and running. Cheers, Eric On 11/24/2015 11:46 AM, Björn Grüning wrote: > Hi Shane, > > would Slurm work for you? > > http://slurm.schedmd.com/ > > Cheers, > Bjoern > > Am 24.11.2015 um 13:12 schrieb Shane Kelly: > > Hi, > > I am looking for a simple task scheduler to use with Galaxy and > > initially picked Torque, but since my server is a single box, Torque > > would appear to be overkill? > > > > Can I have any input from anyone who may have used it? > > > > Thanks for any response > > ___ > > Please keep all replies on the list by using "reply all" > > in your mail client. To manage your subscriptions to this > > and other Galaxy lists, please use the interface at: > > https://lists.galaxyproject.org/ > > > > To search Galaxy mailing lists use the unified search at: > > http://galaxyproject.org/search/mailinglists/ > > > ___ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ > -- Eric Rasche Programmer II Center for Phage Technology Rm 312A, BioBio Texas A University College Station, TX 77843 404-692-2048 e...@tamu.edu ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
