Re: [galaxy-dev] Problem upgrading

2016-05-20 Thread Will Holtz 
And as for "sudo git checkout v16.04" not working, it appears to me that
the release commits have not been given tags since v15.07.

-Will

On Fri, May 20, 2016 at 11:52 AM, Scott Szakonyi 
wrote:

> Will, thank you so much! That absolutely did the trick.
>
> -Scott
>
> On Fri, May 20, 2016 at 2:48 PM, Will Holtz  wrote:
>
>> There is a 'git' missing in there. Try:
>> sudo git checkout master && git pull --ff-only origin master
>>
>> -Will
>>
>>
>> On Fri, May 20, 2016 at 11:42 AM, Scott Szakonyi <
>> scott.b.szakony...@nd.edu> wrote:
>>
>>> Hello,
>>>
>>> I'm currently running Galaxy 16.01, and I'd like to upgrade to 16.04.
>>> However, when I attempt to do so, I get an error, and git log shows I'm
>>> still on 16.01.
>>>
>>> $ sudo git checkout master && pull --ff-only origin master
>>> M tool-data/all_fasta.loc.sample
>>> Already on 'master'
>>> -bash: pull: command not found
>>>
>>>
>>> I also tried updating to the exact version:
>>>
>>> sudo git checkout v16.04
>>> error: pathspec 'v16.04' did not match any file(s) known to git.
>>>
>>>
>>> For the record, I'm using Git 1.7.1. I took my commands directory from
>>> the announcement page at
>>> https://docs.galaxyproject.org/en/master/releases/16.04_announce.html
>>>
>>> Any suggestions for ways to get the 16.04 code are greatly appreciated!
>>>
>>> Best,
>>>
>>> --
>>> Scott B. Szakonyi
>>> Research Programmer
>>>
>>> *Center for Research Computing*
>>> 107 Information Technology Center
>>> Notre Dame, IN 46556
>>> http://crc.nd.edu
>>>
>>> ___
>>> Please keep all replies on the list by using "reply all"
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>>>   http://galaxyproject.org/search/mailinglists/
>>>
>>
>>
>>
>> --
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>
>
>
> --
> Scott B. Szakonyi
> Research Programmer
>
> *Center for Research Computing*
> 107 Information Technology Center
> Notre Dame, IN 46556
> http://crc.nd.edu
>



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Re: [galaxy-dev] Problem upgrading

2016-05-20 Thread Will Holtz 
There is a 'git' missing in there. Try:
sudo git checkout master && git pull --ff-only origin master

-Will


On Fri, May 20, 2016 at 11:42 AM, Scott Szakonyi 
wrote:

> Hello,
>
> I'm currently running Galaxy 16.01, and I'd like to upgrade to 16.04.
> However, when I attempt to do so, I get an error, and git log shows I'm
> still on 16.01.
>
> $ sudo git checkout master && pull --ff-only origin master
> M tool-data/all_fasta.loc.sample
> Already on 'master'
> -bash: pull: command not found
>
>
> I also tried updating to the exact version:
>
> sudo git checkout v16.04
> error: pathspec 'v16.04' did not match any file(s) known to git.
>
>
> For the record, I'm using Git 1.7.1. I took my commands directory from the
> announcement page at
> https://docs.galaxyproject.org/en/master/releases/16.04_announce.html
>
> Any suggestions for ways to get the 16.04 code are greatly appreciated!
>
> Best,
>
> --
> Scott B. Szakonyi
> Research Programmer
>
> *Center for Research Computing*
> 107 Information Technology Center
> Notre Dame, IN 46556
> http://crc.nd.edu
>
> ___
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   https://lists.galaxyproject.org/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/
>



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[galaxy-dev] Problem upgrading

2016-05-20 Thread Scott Szakonyi 
Hello,

I'm currently running Galaxy 16.01, and I'd like to upgrade to 16.04.
However, when I attempt to do so, I get an error, and git log shows I'm
still on 16.01.

$ sudo git checkout master && pull --ff-only origin master
M tool-data/all_fasta.loc.sample
Already on 'master'
-bash: pull: command not found


I also tried updating to the exact version:

sudo git checkout v16.04
error: pathspec 'v16.04' did not match any file(s) known to git.


For the record, I'm using Git 1.7.1. I took my commands directory from the
announcement page at
https://docs.galaxyproject.org/en/master/releases/16.04_announce.html

Any suggestions for ways to get the 16.04 code are greatly appreciated!

Best,

-- 
Scott B. Szakonyi
Research Programmer

*Center for Research Computing*
107 Information Technology Center
Notre Dame, IN 46556
http://crc.nd.edu
___
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