Re: [galaxy-dev] Writing test for dataset collection

[Cristel Thomas]

thanks guys, very helpful =)

On Mon, Jul 11, 2016 at 3:39 PM, Martin Čech  wrote:

> Hi Cristel,
>
> for a start I please have a look at
> http://planemo.readthedocs.io/en/latest/writing_advanced.html#test-driven-development
>  and
> let us know if you have further questions. The documentation regarding this
> is a still bit scarce, I am sorry.
>
> Martin
>
> On Mon, Jul 11, 2016 at 3:24 PM Cristel Thomas 
> wrote:
>
>> Dear galaxy developers,
>>
>> Can someone point me to a resource explaining how to write the test
>> section of the xml for tools dealing with dataset collections? as input as
>> well as output.
>>
>> Thanks much,
>> Cris
>> ___
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>
>
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Re: [galaxy-dev] Writing test for dataset collection

[Martin Čech]

Hi Cristel,

for a start I please have a look at
http://planemo.readthedocs.io/en/latest/writing_advanced.html#test-driven-development
and
let us know if you have further questions. The documentation regarding this
is a still bit scarce, I am sorry.

Martin

On Mon, Jul 11, 2016 at 3:24 PM Cristel Thomas 
wrote:

> Dear galaxy developers,
>
> Can someone point me to a resource explaining how to write the test
> section of the xml for tools dealing with dataset collections? as input as
> well as output.
>
> Thanks much,
> Cris
> ___
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   https://lists.galaxyproject.org/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/
___
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Re: [galaxy-dev] Writing test for dataset collection

[Björn Grüning]

Hi Christel,

here you can find a lot of tests:

https://github.com/galaxyproject/galaxy/blob/dev/test/functional/tools/collection_creates_list.xml

This folder is a treasure for small little examples.
Hope this will help!
Cheers,
Bjoern

Am 11.07.2016 um 21:24 schrieb Cristel Thomas:
> Dear galaxy developers,
> 
> Can someone point me to a resource explaining how to write the test section
> of the xml for tools dealing with dataset collections? as input as well as
> output.
> 
> Thanks much,
> Cris
> 
> 
> 
> ___
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   https://lists.galaxyproject.org/
> 
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/
> 
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[galaxy-dev] Motif Alignment and Search Tool - MAST

[KIRILL PANKOV]

Hello,

I was hoping to use MAST, a part of the MEME Suite collection of tools, in
Galaxy: http://meme-suite.org/doc/mast.html?man_type=web

While I have found the MEME Suite, I have been unable to locate the
specific MAST tool in the tool shed.

I was wondering if it was currently available for use in Galaxy?

Thanks,

Kirill Pankov
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