[galaxy-user] Filter Fastq

2013-05-09 Thread Casey,Richard 
Hi,

We have two Filter FASTQ jobs running on the Galaxy public server.  Both jobs 
have been running for more than four days.  This seems like an excessive amount 
of runtime.  Do Filter FASTQ jobs normally take this long to run?



Richard


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Re: [galaxy-user] Map with BWA for Illumina is hung

2013-05-01 Thread Casey,Richard 
Hi Jennifer,

It looks like it finally ran yesterday.  I guess the server was just very busy.


---
Richard Casey, PhD
CSU
970-492-4127
970-980-5975
richard.ca...@colostate.edumailto:richard.ca...@colostate.edu

From: Jennifer Jackson [mailto:j...@bx.psu.edu]
Sent: Wednesday, May 01, 2013 12:25 PM
To: Casey,Richard
Cc: galaxy-user@lists.bx.psu.edu
Subject: Re: [galaxy-user] Map with BWA for Illumina is hung

Hello Richard,

The public Main Galaxy server is very busy right now. I didn't find an account 
associated with this email address. If you would like to send me your account 
email (a direct reply would be fine) - I can check the queue.
Best,

Jen
Galaxy team
On 4/30/13 7:36 AM, Casey,Richard wrote:
Hi, when we try using Map with BWA for Illumina on the public server, it never 
starts running and sits in a queued state forever.  We have jobs that have been 
queued for more than 5 days.  Any ideas on why these jobs never start?


---
Richard Casey, PhD
CSU
970-492-4127
970-980-5975
richard.ca...@colostate.edumailto:richard.ca...@colostate.edu





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use the Galaxy Development list:



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please use the interface at:



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--

Jennifer Hillman-Jackson

Galaxy Support and Training

http://galaxyproject.org
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[galaxy-user] Map with BWA for Illumina is hung

2013-04-30 Thread Casey,Richard 
Hi, when we try using Map with BWA for Illumina on the public server, it never 
starts running and sits in a queued state forever.  We have jobs that have been 
queued for more than 5 days.  Any ideas on why these jobs never start?


---
Richard Casey, PhD
CSU
970-492-4127
970-980-5975
richard.ca...@colostate.edumailto:richard.ca...@colostate.edu

___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
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local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

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please use the interface at:

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