[galaxy-user] How to merge Fastq groomer files in Galaxy?

[Fang,Xiefan]

Dear Galaxy users,
 Does anyone know how to merge several FASTQ groomer files by using 
Galaxy? If not, is there any other program that can achieve this?  The size of 
one FASTQ groomer file is around 1GB. Thank you!


Best regards,
Xiefan Fang, Ph.D.
Postdoctoral associate
Department of Pediatrics
College of Medicine
University of Florida
Phone: 352-294-5675
Email: xiefanf...@ufl.edu

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Re: [galaxy-user] How to merge Fastq groomer files in Galaxy?

[Peter Cock]

On Tue, Oct 16, 2012 at 8:22 PM, Fang,Xiefan xiefanf...@ufl.edu wrote:
 Dear Galaxy users,

  Does anyone know how to merge several FASTQ groomer files by using
 Galaxy? If not, is there any other program that can achieve this?  The size
 of one FASTQ groomer file is around 1GB. Thank you!


The Galaxy tool Concatenate datasets tail-to-head under Text Manipulation
should work. I'm assuming you just need a simple concatenation of individual
FASTQ files, not a more complex merge dealing with duplicates or sorting.

Peter
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