[gentoo-commits] proj/sci:master commit in: sci-biology/nwalign/

2020-01-24 Thread Martin Mokrejs
commit: 7d09a68f938a752bf97adf9e4cafe473848318d4
Author: Martin Mokrejs  gmail  com>
AuthorDate: Fri Jan 24 17:51:54 2020 +
Commit: Martin Mokrejs  fold  natur  cuni  cz>
CommitDate: Fri Jan 24 17:54:14 2020 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=7d09a68f

sci-biology/nwalign: drop python2-only package, use nwalign3 instead

Package-Manager: Portage-2.3.84, Repoman-2.3.20
Signed-off-by: Martin Mokrejs  gmail.com>

 sci-biology/nwalign/metadata.xml | 15 ---
 sci-biology/nwalign/nwalign-0.3.1.ebuild | 22 --
 2 files changed, 37 deletions(-)

diff --git a/sci-biology/nwalign/metadata.xml b/sci-biology/nwalign/metadata.xml
deleted file mode 100644
index e593c9312..0
--- a/sci-biology/nwalign/metadata.xml
+++ /dev/null
@@ -1,15 +0,0 @@
-
-http://www.gentoo.org/dtd/metadata.dtd";>
-
-   
-   mmokr...@fold.natur.cuni.cz
-   Martin Mokrejs
-   
-   
-   sci-biol...@gentoo.org
-   Gentoo Biology Project
-   
-   
-   nwalign
-   
-

diff --git a/sci-biology/nwalign/nwalign-0.3.1.ebuild 
b/sci-biology/nwalign/nwalign-0.3.1.ebuild
deleted file mode 100644
index 06285c366..0
--- a/sci-biology/nwalign/nwalign-0.3.1.ebuild
+++ /dev/null
@@ -1,22 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1 
-
-DESCRIPTION="Needleman-Wunsch global sequence alignment in python2"
-HOMEPAGE="https://pypi.python.org/pypi/nwalign";
-SRC_URI="mirror://pypi/n/${PN}/${P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND="
-   dev-python/numpy
-   dev-python/cython"
-RDEPEND="${DEPEND}"



[gentoo-commits] proj/sci:master commit in: sci-biology/nwalign/

2016-01-04 Thread Martin Mokrejs
commit: 63a25779bff8bcfb45d2d5f3147eb2f048d1e540
Author: Martin Mokrejš  fold  natur  cuni  cz>
AuthorDate: Mon Jan  4 14:26:10 2016 +
Commit: Martin Mokrejs  fold  natur  cuni  cz>
CommitDate: Mon Jan  4 14:26:10 2016 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=63a25779

sci-biology/nwalign: new python package

Package-Manager: portage-2.2.26

 sci-biology/nwalign/ChangeLog|  9 +
 sci-biology/nwalign/metadata.xml |  9 +
 sci-biology/nwalign/nwalign-0.3.1.ebuild | 21 +
 3 files changed, 39 insertions(+)

diff --git a/sci-biology/nwalign/ChangeLog b/sci-biology/nwalign/ChangeLog
new file mode 100644
index 000..925b62c
--- /dev/null
+++ b/sci-biology/nwalign/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for sci-biology/nwalign
+# Copyright 1999-2016 Gentoo Foundation; Distributed under the GPL v2
+# $Id$
+
+*nwalign-0.3.1 (04 Jan 2016)
+
+  04 Jan 2016; Martin Mokrejs  +metadata.xml,
+  +nwalign-0.3.1.ebuild:
+  sci-biology/nwalign: new python package

diff --git a/sci-biology/nwalign/metadata.xml b/sci-biology/nwalign/metadata.xml
new file mode 100644
index 000..2bc8930
--- /dev/null
+++ b/sci-biology/nwalign/metadata.xml
@@ -0,0 +1,9 @@
+
+http://www.gentoo.org/dtd/metadata.dtd";>
+
+  sci-biology
+  
+mmokr...@fold.natur.cuni.cz
+Martin Mokrejs
+  
+

diff --git a/sci-biology/nwalign/nwalign-0.3.1.ebuild 
b/sci-biology/nwalign/nwalign-0.3.1.ebuild
new file mode 100644
index 000..174d308
--- /dev/null
+++ b/sci-biology/nwalign/nwalign-0.3.1.ebuild
@@ -0,0 +1,21 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit python-single-r1
+
+DESCRIPTION="Needleman-Wunsch global sequence alignment in python/cython"
+HOMEPAGE="https://pypi.python.org/pypi/nwalign";
+SRC_URI="mirror://pypi/n/${PN}/${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}"