commit: 5f26b5938812d41ebfd3712a9c59ba8a49f13d1b
Author: Jakov Smolić gentoo org>
AuthorDate: Mon Aug 29 08:06:35 2022 +
Commit: Jakov Smolić gentoo org>
CommitDate: Mon Aug 29 08:07:22 2022 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5f26b593
sci-chemistry/numbat: treeclean
Closes: https://bugs.gentoo.org/862486
Closes: https://bugs.gentoo.org/583038
Signed-off-by: Jakov Smolić gentoo.org>
profiles/package.mask | 5 --
sci-chemistry/numbat/Manifest | 1 -
.../numbat/files/numbat-0.999-gnuplot.patch| 42
sci-chemistry/numbat/metadata.xml | 19
sci-chemistry/numbat/numbat-0.999-r2.ebuild| 56 --
5 files changed, 123 deletions(-)
diff --git a/profiles/package.mask b/profiles/package.mask
index 802fbdab5660..e081bb867239 100644
--- a/profiles/package.mask
+++ b/profiles/package.mask
@@ -291,11 +291,6 @@ dev-qt/qtwebsockets:6
# Removal in 30 days (Bug #)
(2022-07-31)
-# No updates since 2010, dead homepage, and incompatible with newer
-# sci-libs/gsl. Bug #862486. Removal on 2022-08-31.
-sci-chemistry/numbat
-
# Marek Szuba (2022-07-13)
# Upstream has switched from CMake to hand-crafted Makefiles (yes, TO them),
# which have seriously messed up dependency handling and trigger several
diff --git a/sci-chemistry/numbat/Manifest b/sci-chemistry/numbat/Manifest
deleted file mode 100644
index 961584beeaaa..
--- a/sci-chemistry/numbat/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST Numbat-0.999.tar.gz 1791471 BLAKE2B
7f6536533fdf6bc3860dc1a7c03ade4896e782c5ecadf1c6a7d70896f4c6ef9f0571796c171012497d7b47b3342c215a5302ed210d7dde3ecdbef170c3f55dbc
SHA512
0887f77905bbb476b0d12a7015d5d5745023740acc974ea9cd452de7d38a75a92e6090015127588b38ba62353d38c2be20f57be5df3011b51050c4934dfd206c
diff --git a/sci-chemistry/numbat/files/numbat-0.999-gnuplot.patch
b/sci-chemistry/numbat/files/numbat-0.999-gnuplot.patch
deleted file mode 100644
index 942f5871e50b..
--- a/sci-chemistry/numbat/files/numbat-0.999-gnuplot.patch
+++ /dev/null
@@ -1,42 +0,0 @@
- src/error_analysis.c | 20 ++--
- 1 file changed, 10 insertions(+), 10 deletions(-)
-
-diff --git a/src/error_analysis.c b/src/error_analysis.c
-index eb86a6f..c0edf5f 100644
a/src/error_analysis.c
-+++ b/src/error_analysis.c
-@@ -848,11 +848,11 @@ void write_sanson_mac(FILE * F, char * name_plot, char *
name_world, int number_
- }
-
- fprintf(F, "reset\n");
--fprintf(F, "set noxtics\n");
--fprintf(F, "set noytics\n");
-+fprintf(F, "unset xtics\n");
-+fprintf(F, "unset ytics\n");
- fprintf(F, "set angles degrees\n");
--fprintf(F, "set nogrid\n");
--fprintf(F, "set noborder\n");
-+fprintf(F, "unset grid\n");
-+fprintf(F, "unset border\n");
- //fprintf(F, "width=40\n");
- //fprintf(F, "height=width*(3./4.)\n");
- //fprintf(F, "set xrange [-width : width]\n");
-@@ -867,12 +867,12 @@ void write_sanson_mac(FILE * F, char * name_plot, char *
name_world, int number_
- fprintf(F, "YC(lat,lon)=(lon-long0)*cos(lat)\n");
- fprintf(F, "plot '%s' using (YC($2,$1)):(XC($2,$1)) t '' with lines lw
0.1 lt -1", name_world);
- for(i = 0; i < number_of_tensor; i++){
--fprintf(F, ", '%s' using (YC($%d,$%d)):(XC($%d,$%d)) t '' with points
%d", name_plot,
--6*i+2, 6*i+1, 6*i+2, 6*i+1, 3*i+1);
--fprintf(F, ", '%s' using (YC($%d,$%d)):(XC($%d,$%d)) t '' with points
%d", name_plot,
--6*i+4, 6*i+3, 6*i+4, 6*i+3, 3*i+2);
--fprintf(F, ", '%s' using (YC($%d,$%d)):(XC($%d,$%d)) t '' with points
%d", name_plot,
--6*i+6, 6*i+5, 6*i+6, 6*i+5, 3*i+3);
-+fprintf(F, ", '%s' using (YC($%d,$%d)):(XC($%d,$%d)) t '' with
points", name_plot,
-+6*i+2, 6*i+1, 6*i+2, 6*i+1);
-+fprintf(F, ", '%s' using (YC($%d,$%d)):(XC($%d,$%d)) t '' with
points", name_plot,
-+6*i+4, 6*i+3, 6*i+4, 6*i+3);
-+fprintf(F, ", '%s' using (YC($%d,$%d)):(XC($%d,$%d)) t '' with
points", name_plot,
-+6*i+6, 6*i+5, 6*i+6, 6*i+5);
- }
- fprintf(F, "\n");
- //fprintf(F, "pause 2\n");
diff --git a/sci-chemistry/numbat/metadata.xml
b/sci-chemistry/numbat/metadata.xml
deleted file mode 100644
index 273753c203e5..
--- a/sci-chemistry/numbat/metadata.xml
+++ /dev/null
@@ -1,19 +0,0 @@
-
-https://www.gentoo.org/dtd/metadata.dtd;>
-
-
-sci-chemis...@gentoo.org
-Gentoo Chemistry Project
-
-
-Numbat is a user friendly software that fits dX-tensor to a set of PCS
-measurements and a structure from a PDB file. It has also been designed to
-assist in the semi automatic process of PCS assignment. A detailed description
-of the software can be found in this publication:
-
-Christophe Schmitz, Mitchell J. Stanton-Cook, Xun-Cheng Su, Gottfried Otting,
-and Thomas Huber (2008).
