[gentoo-commits] repo/proj/guru:dev commit in: sys-cluster/SOS/
commit: dd31309049f611fe1182e7448a17a77edf2061f6
Author: Alessandro Barbieri gmail com>
AuthorDate: Thu Jul 7 07:42:24 2022 +
Commit: Alessandro Barbieri gmail com>
CommitDate: Thu Jul 7 07:59:06 2022 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=dd313090
sys-cluster/SOS: add 1.5.1
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/SOS/Manifest | 1 +
sys-cluster/SOS/SOS-1.5.1.ebuild | 133 +++
2 files changed, 134 insertions(+)
diff --git a/sys-cluster/SOS/Manifest b/sys-cluster/SOS/Manifest
index f36dc6067..39fe5f9b1 100644
--- a/sys-cluster/SOS/Manifest
+++ b/sys-cluster/SOS/Manifest
@@ -1 +1,2 @@
DIST SOS-1.5.0.tar.gz 544478 BLAKE2B
f2a63fbf39958ac238e2d687d866c2f600956b933f956a4d8552acff29973de4d3e46a323b3f8eb3a63d395728cbafdfe119ea99d0fb5e17250d879ff269fb0e
SHA512
0506bda8ab898cd1aaea82e230c64e17dde4ccfb3b70c9a4397c90d08643b3c7f96e7eae70e1a2b706b33737e979315372bcc338fc957652cd1b5e55d7a560ad
+DIST SOS-1.5.1.tar.gz 590101 BLAKE2B
c6ca85942dbfbd4ecc02700ec2b84ab4f6fd00809ba77448973255ddea8ffab13977bbbe6bb7a2d69476f7fc5e6de43e077193dc8a6761a0de05d5a9c8a0a6a2
SHA512
a181a14c841611fbac2ba69b8f25ce856e1e5e9c9a7bbd37482e77d61b83365863778bcbaf898c4d6489c6b9c0aa69fb8fd60bc5468bcc01f82002d0533d0378
diff --git a/sys-cluster/SOS/SOS-1.5.1.ebuild b/sys-cluster/SOS/SOS-1.5.1.ebuild
new file mode 100644
index 0..a4ebf34c7
--- /dev/null
+++ b/sys-cluster/SOS/SOS-1.5.1.ebuild
@@ -0,0 +1,133 @@
+# Copyright 2019-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+FORTRAN_NEEDED="fortran"
+
+inherit autotools fortran-2
+
+DESCRIPTION="implementation of the OpenSHMEM specification"
+HOMEPAGE="https://github.com/Sandia-OpenSHMEM/SOS";
+SRC_URI="https://github.com/Sandia-OpenSHMEM/SOS/archive/refs/tags/v${PV}.tar.gz
-> ${P}.tar.gz"
+
+LICENSE="BSD public-domain"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE_OFI_MR="
+ ofi_mr_basic
+ +ofi_mr_scalable
+ ofi_mr_rma-event
+"
+IUSE_TOTAL_DATA_ORDERING="
+ total_data_ordering_always
+ +total_data_ordering_check
+ total_data_ordering_never
+"
+IUSE="${IUSE_OFI_MR} ${IUSE_TOTAL_DATA_ORDERING} av-map bounce-buffers cma
completion-polling cxx
+debug error-checking fortran long-fortran-header manual-progress memcpy ofi
ofi-fence openmp
++pmi portals4 profiling pthread-mutexes remote-virtual-addressing threads
+thread-completion ucx xpmem"
+
+RDEPEND="
+ ofi? ( sys-block/libfabric )
+ pmi? ( || ( sys-cluster/slurm sys-cluster/pmix[pmi] ) )
+ portals4? ( sys-cluster/portals4 )
+ ucx? ( sys-cluster/ucx )
+ xpmem? ( sys-kernel/xpmem )
+"
+DEPEND="${RDEPEND}"
+
+REQUIRED_USE="
+ ^^ ( ${IUSE_OFI_MR/+/} )
+ ^^ ( ${IUSE_TOTAL_DATA_ORDERING/+/} )
+ ?? ( cma xpmem )
+ ?? ( ofi portals4 )
+"
+
+pkg_setup() {
+ FORTRAN_NEED_OPENMP=0
+ use openmp && FORTRAN_NEED_OPENMP=1
+
+ fortran-2_pkg_setup
+}
+
+src_prepare() {
+ default
+
+ #copied from bootstrap
+ if [[ ! -d ./config ]]; then
+ mkdir ./config || die
+ fi
+ FILES=./man/*.1
+ echo -n "dist_man1_MANS =" > ./man/Makefile.am || die
+ for f in $FILES
+ do
+ echo -n " $(basename $f)" >> ./man/Makefile.am || die
+ done
+ FILES=./man/*.3
+ echo -e -n "\ndist_man3_MANS =" >> ./man/Makefile.am || die
+ for f in $FILES
+ do
+ echo -n " $(basename $f)" >> ./man/Makefile.am || die
+ done
+ echo -e "\n" >> ./man/Makefile.am || die
+
+ eautoreconf
+}
+
+src_configure() {
+ if use pmi; then
+ export CC=mpicc
+ export CXX=mpicxx
+ fi
+
+ local ofimr
+ use ofi_mr_basic && ofimr="basic"
+ use ofi_mr_scalable && ofimr="scalable"
+ use ofi_mr_rma-event && ofimr="rma-event"
+
+ local tda
+ use total_data_ordering_always && tda="always"
+ use total_data_ordering_check && tda="check"
+ use total_data_ordering_never && tda="never"
+
+ local myconf=(
+ --disable-picky
+ --disable-pmi-simple
+ --disable-rpm-prefix
+ --enable-ofi-mr="${ofimr}"
+ --enable-total-data-ordering="${tda}"
+ $(use_enable av-map)
+ $(use_enable bounce-buffers)
+ $(use_enable completion-polling)
+ $(use_enable cxx)
+ $(use_enable debug)
+ $(use_enable error-checking)
+ $(use_enable fortran)
+ $(use_enable long-fortran-header)
+ $(use_enable manual-progress)
+ $(use_enable memcpy)
+ $(use_enable ofi-fence)
+ $(use_enable openmp)
+ $(use_enable pmi pmi-mpi)
+ $(use_enable profiling)
+ $(use_enable pthread-mutexes)
+
[gentoo-commits] repo/proj/guru:dev commit in: sys-cluster/SOS/
commit: 7d014f67f373451ad3b5f9d759f56b078986c608
Author: Alessandro Barbieri gmail com>
AuthorDate: Thu Jun 9 23:39:41 2022 +
Commit: Alessandro Barbieri gmail com>
CommitDate: Fri Jun 10 03:58:04 2022 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=7d014f67
sys-cluster/SOS: update LICENSE
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/SOS/SOS-1.5.0-r1.ebuild | 16 +++-
sys-cluster/SOS/metadata.xml| 3 +--
2 files changed, 8 insertions(+), 11 deletions(-)
diff --git a/sys-cluster/SOS/SOS-1.5.0-r1.ebuild
b/sys-cluster/SOS/SOS-1.5.0-r1.ebuild
index 3ac0bd985..a4ebf34c7 100644
--- a/sys-cluster/SOS/SOS-1.5.0-r1.ebuild
+++ b/sys-cluster/SOS/SOS-1.5.0-r1.ebuild
@@ -11,7 +11,7 @@ DESCRIPTION="implementation of the OpenSHMEM specification"
HOMEPAGE="https://github.com/Sandia-OpenSHMEM/SOS";
SRC_URI="https://github.com/Sandia-OpenSHMEM/SOS/archive/refs/tags/v${PV}.tar.gz
-> ${P}.tar.gz"
-LICENSE="BSD public-domain mpich2"
+LICENSE="BSD public-domain"
SLOT="0"
KEYWORDS="~amd64"
IUSE_OFI_MR="
@@ -26,13 +26,12 @@ IUSE_TOTAL_DATA_ORDERING="
"
IUSE="${IUSE_OFI_MR} ${IUSE_TOTAL_DATA_ORDERING} av-map bounce-buffers cma
completion-polling cxx
debug error-checking fortran long-fortran-header manual-progress memcpy ofi
ofi-fence openmp
-+pmi-mpi pmi-simple portals4 profiling pthread-mutexes
remote-virtual-addressing threads
++pmi portals4 profiling pthread-mutexes remote-virtual-addressing threads
thread-completion ucx xpmem"
RDEPEND="
ofi? ( sys-block/libfabric )
- pmi-simple? ( sys-cluster/pmix[pmi] )
- pmi-mpi? ( virtual/mpi )
+ pmi? ( || ( sys-cluster/slurm sys-cluster/pmix[pmi] ) )
portals4? ( sys-cluster/portals4 )
ucx? ( sys-cluster/ucx )
xpmem? ( sys-kernel/xpmem )
@@ -42,7 +41,6 @@ DEPEND="${RDEPEND}"
REQUIRED_USE="
^^ ( ${IUSE_OFI_MR/+/} )
^^ ( ${IUSE_TOTAL_DATA_ORDERING/+/} )
- ^^ ( pmi-mpi pmi-simple )
?? ( cma xpmem )
?? ( ofi portals4 )
"
@@ -79,7 +77,7 @@ src_prepare() {
}
src_configure() {
- if use pmi-mpi; then
+ if use pmi; then
export CC=mpicc
export CXX=mpicxx
fi
@@ -96,6 +94,7 @@ src_configure() {
local myconf=(
--disable-picky
+ --disable-pmi-simple
--disable-rpm-prefix
--enable-ofi-mr="${ofimr}"
--enable-total-data-ordering="${tda}"
@@ -111,8 +110,7 @@ src_configure() {
$(use_enable memcpy)
$(use_enable ofi-fence)
$(use_enable openmp)
- $(use_enable pmi-mpi)
- $(use_enable pmi-simple)
+ $(use_enable pmi pmi-mpi)
$(use_enable profiling)
$(use_enable pthread-mutexes)
$(use_enable remote-virtual-addressing)
@@ -121,7 +119,7 @@ src_configure() {
$(use_with cma)
$(use_with ofi)
- $(use_with pmi-mpi pmi)
+ $(use_with pmi)
$(use_with portals4)
$(use_with ucx)
$(use_with xpmem)
diff --git a/sys-cluster/SOS/metadata.xml b/sys-cluster/SOS/metadata.xml
index a1df257ec..fcba7b257 100644
--- a/sys-cluster/SOS/metadata.xml
+++ b/sys-cluster/SOS/metadata.xml
@@ -19,8 +19,7 @@
Use libfabric as transport layer
Use FI_FENCE feature to optimize
put-with-signal operations
- Use MPI for process management
- Include support for interfacing with a
PMI 1.0 launcher. The launcher must be provided by a separate package, such as
MPICH, Hydra, or SLURM.
+ Use MPI for process management
Use portals4 as transport layer
Enable profiling (pshmem)
interface
Use pthread mutexes instead of
internal queueing locks
[gentoo-commits] repo/proj/guru:dev commit in: sys-cluster/SOS/
commit: 4de836b2cb47b36d693ac6d0e4e6dc056953ab00
Author: Alessandro Barbieri gmail com>
AuthorDate: Thu Jun 2 13:25:16 2022 +
Commit: Alessandro Barbieri gmail com>
CommitDate: Thu Jun 2 13:50:04 2022 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=4de836b2
sys-cluster/SOS: correctly link to mpi
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/SOS/{SOS-1.5.0.ebuild => SOS-1.5.0-r1.ebuild} | 5 +
1 file changed, 5 insertions(+)
diff --git a/sys-cluster/SOS/SOS-1.5.0.ebuild
b/sys-cluster/SOS/SOS-1.5.0-r1.ebuild
similarity index 97%
rename from sys-cluster/SOS/SOS-1.5.0.ebuild
rename to sys-cluster/SOS/SOS-1.5.0-r1.ebuild
index efe8effda..3ac0bd985 100644
--- a/sys-cluster/SOS/SOS-1.5.0.ebuild
+++ b/sys-cluster/SOS/SOS-1.5.0-r1.ebuild
@@ -79,6 +79,11 @@ src_prepare() {
}
src_configure() {
+ if use pmi-mpi; then
+ export CC=mpicc
+ export CXX=mpicxx
+ fi
+
local ofimr
use ofi_mr_basic && ofimr="basic"
use ofi_mr_scalable && ofimr="scalable"
[gentoo-commits] repo/proj/guru:dev commit in: sys-cluster/SOS/
commit: 39bc696e1bc0c295322d8372961c632001c2647f
Author: Alessandro Barbieri gmail com>
AuthorDate: Thu Aug 5 23:55:47 2021 +
Commit: Alessandro Barbieri gmail com>
CommitDate: Fri Aug 6 00:16:44 2021 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=39bc696e
sys-cluster/SOS: initial import
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/SOS/Manifest | 1 +
sys-cluster/SOS/SOS-1.5.0.ebuild | 131 +++
sys-cluster/SOS/metadata.xml | 43 +
3 files changed, 175 insertions(+)
diff --git a/sys-cluster/SOS/Manifest b/sys-cluster/SOS/Manifest
new file mode 100644
index 0..f36dc6067
--- /dev/null
+++ b/sys-cluster/SOS/Manifest
@@ -0,0 +1 @@
+DIST SOS-1.5.0.tar.gz 544478 BLAKE2B
f2a63fbf39958ac238e2d687d866c2f600956b933f956a4d8552acff29973de4d3e46a323b3f8eb3a63d395728cbafdfe119ea99d0fb5e17250d879ff269fb0e
SHA512
0506bda8ab898cd1aaea82e230c64e17dde4ccfb3b70c9a4397c90d08643b3c7f96e7eae70e1a2b706b33737e979315372bcc338fc957652cd1b5e55d7a560ad
diff --git a/sys-cluster/SOS/SOS-1.5.0.ebuild b/sys-cluster/SOS/SOS-1.5.0.ebuild
new file mode 100644
index 0..f7f505c4f
--- /dev/null
+++ b/sys-cluster/SOS/SOS-1.5.0.ebuild
@@ -0,0 +1,131 @@
+# Copyright 2019-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+FORTRAN_NEEDED="fortran"
+
+inherit autotools fortran-2
+
+DESCRIPTION="implementation of the OpenSHMEM specification"
+HOMEPAGE="https://github.com/Sandia-OpenSHMEM/SOS";
+SRC_URI="https://github.com/Sandia-OpenSHMEM/SOS/archive/refs/tags/v${PV}.tar.gz
-> ${P}.tar.gz"
+
+LICENSE="BSD public-domain mpich2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE_OFI_MR="
+ ofi-mr-basic
+ +ofi-mr-scalable
+ ofi-mr-rma-event
+"
+IUSE_TOTAL_DATA_ORDERING="
+ total-data-ordering-always
+ +total-data-ordering-check
+ total-data-ordering-never
+"
+IUSE_EXPAND="OFI_MR TOTAL_DATA_ORDERING"
+IUSE="${IUSE_OFI_MR} ${IUSE_TOTAL_DATA_ORDERING} av-map bounce-buffers cma
completion-polling cxx
+debug error-checking fortran long-fortran-header manual-progress memcpy ofi
ofi-fence openmp
++pmi-mpi pmi-simple portals4 profiling pthread-mutexes
remote-virtual-addressing threads
+thread-completion ucx xpmem"
+
+RDEPEND="
+ ofi? ( sys-block/libfabric )
+ pmi-simple? ( sys-cluster/pmix[pmi] )
+ pmi-mpi? ( virtual/mpi )
+ portals4? ( sys-cluster/portals4 )
+ ucx? ( sys-cluster/ucx )
+ xpmem? ( sys-kernel/xpmem )
+"
+DEPEND="${RDEPEND}"
+
+REQUIRED_USE="
+ ^^ ( ${IUSE_OFI_MR/+/} )
+ ^^ ( ${IUSE_TOTAL_DATA_ORDERING/+/} )
+ ^^ ( pmi-mpi pmi-simple )
+ ?? ( cma xpmem )
+ ?? ( ofi portals4 )
+"
+
+pkg_setup() {
+ FORTRAN_NEED_OPENMP=0
+ use openmp && FORTRAN_NEED_OPENMP=1
+
+ fortran-2_pkg_setup
+}
+
+src_prepare() {
+ default
+
+ #copied from bootstrap
+ if [[ ! -d ./config ]]; then
+ mkdir ./config || die
+ fi
+ FILES=./man/*.1
+ echo -n "dist_man1_MANS =" > ./man/Makefile.am || die
+ for f in $FILES
+ do
+ echo -n " $(basename $f)" >> ./man/Makefile.am || die
+ done
+ FILES=./man/*.3
+ echo -e -n "\ndist_man3_MANS =" >> ./man/Makefile.am || die
+ for f in $FILES
+ do
+ echo -n " $(basename $f)" >> ./man/Makefile.am || die
+ done
+ echo -e "\n" >> ./man/Makefile.am || die
+
+ eautoreconf
+}
+
+src_configure() {
+ local ofimr
+ use ofi-mr-basic && ofimr="basic"
+ use ofi-mr-scalable && ofimr="scalable"
+ use ofi-mr-rma-event && ofimr="rma-event"
+
+ local tda
+ use total-data-ordering-always && tda="always"
+ use total-data-ordering-check && tda="check"
+ use total-data-ordering-never && tda="never"
+
+ local myconf=(
+ --disable-picky
+ --disable-rpm-prefix
+ --enable-ofi-mr="${ofimr}"
+ --enable-total-data-ordering="${tda}"
+ $(use_enable av-map)
+ $(use_enable bounce-buffers)
+ $(use_enable completion-polling)
+ $(use_enable cxx)
+ $(use_enable debug)
+ $(use_enable error-checking)
+ $(use_enable fortran)
+ $(use_enable long-fortran-header)
+ $(use_enable manual-progress)
+ $(use_enable memcpy)
+ $(use_enable ofi-fence)
+ $(use_enable openmp)
+ $(use_enable pmi-mpi)
+ $(use_enable pmi-simple)
+ $(use_enable profiling)
+ $(use_enable pthread-mutexes)
+ $(use_enable remote-virtual-addressing)
+ $(use_enable threads)
+ $(use_enable thread-completion)
+
+ $(use_with cma)
+ $(use_with ofi)
+ $(use_with pmi-mpi pmi)
+
