[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: 06c6b69d9f1e2607b6efd61ddda17a49fbd7cd76
Author: Alessandro Barbieri gmail com>
AuthorDate: Tue Jun 14 07:58:26 2022 +
Commit: Haelwenn Monnier hacktivis me>
CommitDate: Tue Jun 14 08:00:26 2022 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=06c6b69d
sys-cluster/OpenHPC-meta: add scalasca
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
index 0b38f75ac..4cc4de078 100644
--- a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
+++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
@@ -68,6 +68,7 @@ RDEPEND="
sys-cluster/extrae[${PYTHON_SINGLE_USEDEP}]
sys-cluster/mpi-benchmarks
sys-cluster/osu-micro-benchmarks
+ sys-cluster/scalasca
sys-cluster/scorep[mpi,unwind]
)
@@ -106,7 +107,6 @@ RDEPEND="
"
# perf-tools
- #scalasca
#tau
# slurm-server
[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: 033e80f7a65618c2158a0191d30bc4670c6a0d52
Author: Alessandro Barbieri gmail com>
AuthorDate: Fri Jun 10 03:56:24 2022 +
Commit: Andrew Ammerlaan gentoo org>
CommitDate: Fri Jun 10 03:58:04 2022 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=033e80f7
sys-cluster/OpenHPC-meta: add scorep
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
index fee1dd24e..0b38f75ac 100644
--- a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
+++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
@@ -68,6 +68,7 @@ RDEPEND="
sys-cluster/extrae[${PYTHON_SINGLE_USEDEP}]
sys-cluster/mpi-benchmarks
sys-cluster/osu-micro-benchmarks
+ sys-cluster/scorep[mpi,unwind]
)
python? (
@@ -107,7 +108,6 @@ RDEPEND="
# perf-tools
#scalasca
#tau
- #scorep
# slurm-server
#pdsh-slurm
[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: 8275bcc923a3f9ef69b7ba0d753c08dafca08e77
Author: Alessandro Barbieri gmail com>
AuthorDate: Thu Jun 2 13:49:04 2022 +
Commit: Florian Schmaus gentoo org>
CommitDate: Thu Jun 2 13:50:04 2022 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=8275bcc9
sys-cluster/OpenHPC-meta: add osu-micro-benchmarks
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
index 62f3499c4..a04447154 100644
--- a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
+++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
@@ -64,6 +64,7 @@ RDEPEND="
sys-apps/likwid
sys-cluster/extrae[${PYTHON_SINGLE_USEDEP}]
sys-cluster/mpi-benchmarks
+ sys-cluster/osu-micro-benchmarks
)
python? (
@@ -106,7 +107,6 @@ RDEPEND="
# perf-tools
# sys-cluster/dimemas[libunwind]
- #omb
#scalasca
#tau
#scorep
[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: 731da4e6f1fdefd80cbf8c5c37d5b616e0be4ef1
Author: Alessandro Barbieri gmail com>
AuthorDate: Thu Jun 2 12:32:32 2022 +
Commit: Florian Schmaus gentoo org>
CommitDate: Thu Jun 2 13:50:03 2022 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=731da4e6
sys-cluster/OpenHPC-meta: add mpi-benchmarks
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
index e6ddfcda4..62f3499c4 100644
--- a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
+++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
@@ -63,6 +63,7 @@ RDEPEND="
dev-libs/papi
sys-apps/likwid
sys-cluster/extrae[${PYTHON_SINGLE_USEDEP}]
+ sys-cluster/mpi-benchmarks
)
python? (
@@ -105,7 +106,6 @@ RDEPEND="
# perf-tools
# sys-cluster/dimemas[libunwind]
- #imb
#omb
#scalasca
#tau
[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: acb31b7b66bb3cdd9d3e1c2d6eff6cd941efce08
Author: Alessandro Barbieri gmail com>
AuthorDate: Tue May 24 17:35:10 2022 +
Commit: Haelwenn Monnier hacktivis me>
CommitDate: Tue May 24 17:36:41 2022 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=acb31b7b
sys-cluster/OpenHPC-meta: add superlu_dist and mfem
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 12 +---
1 file changed, 5 insertions(+), 7 deletions(-)
diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
index 595b64bf1..01a52edc0 100644
--- a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
+++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
@@ -40,21 +40,23 @@ RDEPEND="
dev-libs/boost[mpi]
sci-libs/fftw[mpi]
sci-libs/hypre[mpi]
+ sci-libs/mfem[mpi,mumps,petsc,slepc]
sci-libs/mumps[mpi,scotch]
sci-libs/scalapack
sci-libs/scotch[mpi,threads]
+ sci-libs/superlu_dist[fortran]
sci-libs/trilinos[hypre,mumps,scotch,scalapack,petsc]
sci-mathematics/petsc[fftw,hypre,mpi,mumps,scotch]
sci-mathematics/slepc[mpi]
sys-cluster/opencoarrays
io-libs? (
+ sci-libs/mfem[netcdf]
sci-libs/trilinos[hdf5,netcdf]
sci-mathematics/petsc[hdf5]
)
- python? (
- $(python_gen_cond_dep
'dev-libs/boost[numpy,python,${PYTHON_USEDEP}]')
- )
+ python? ( $(python_gen_cond_dep
'dev-libs/boost[numpy,python,${PYTHON_USEDEP}]') )
+ serial? ( sci-libs/mfem[superlu] )
)
perf-tools? (
@@ -100,10 +102,6 @@ RDEPEND="
#adios[mpi]
#phdf5[mpi]
-# parallel
- #sci-libs/superlu_dist
- #mfem
-
# perf-tools
# sys-cluster/dimemas[libunwind]
#imb
[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: d7539be7c1f9bc627d5311057f1d38ae8484ba3d
Author: Alessandro Barbieri gmail com>
AuthorDate: Mon Mar 28 17:13:05 2022 +
Commit: Ronny Gutbrod tastytea de>
CommitDate: Mon Mar 28 17:14:19 2022 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=d7539be7
sys-cluster/OpenHPC-meta: apptainer alternative to singularity
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
index a06fc131e..595b64bf1 100644
--- a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
+++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -73,7 +73,7 @@ RDEPEND="
runtimes? (
sys-cluster/charliecloud[${PYTHON_SINGLE_USEDEP}]
- sys-cluster/singularity
+ || ( app-containers/apptainer sys-cluster/singularity )
)
serial? (
[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: 3f7d57721df7dcb51972673c61b0ee9db687ef98 Author: Alessandro Barbieri gmail com> AuthorDate: Wed Sep 29 14:30:54 2021 + Commit: Arthur Zamarin gentoo org> CommitDate: Wed Sep 29 14:30:54 2021 + URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=3f7d5772 sys-cluster/OpenHPC-meta: add parallel-netcdf Signed-off-by: Alessandro Barbieri gmail.com> sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild index 1b0d926e2..42ff131c1 100644 --- a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild +++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild @@ -33,6 +33,7 @@ RDEPEND=" sci-libs/netcdf[hdf5,mpi] sci-libs/netcdf-cxx sci-libs/netcdf-fortran + sys-cluster/parallel-netcdf ) parallel? ( @@ -96,7 +97,6 @@ RDEPEND=" " # io-libs #adios[mpi] - #pnetcdf[mpi] #phdf5[mpi] # parallel
[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: a919461990884043363eb5e7a46e7cef903ee935 Author: Alessandro Barbieri gmail com> AuthorDate: Mon Aug 23 21:08:20 2021 + Commit: Andrew Ammerlaan gentoo org> CommitDate: Mon Aug 23 21:08:20 2021 + URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=a9194619 sys-cluster/OpenHPC-meta: add ipmitool Signed-off-by: Alessandro Barbieri gmail.com> sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 1 + 1 file changed, 1 insertion(+) diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild index cf70ae4d2..1b0d926e2 100644 --- a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild +++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild @@ -24,6 +24,7 @@ RDEPEND=" || ( sys-libs/libunwind sys-libs/llvm-libunwind ) app-shells/pdsh + sys-apps/ipmitool sys-process/numactl virtual/mpi
[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: 1b56b40925d7f7ace889c086c0095397439e7122
Author: Alessandro Barbieri gmail com>
AuthorDate: Mon Aug 23 19:42:36 2021 +
Commit: Andrew Ammerlaan gentoo org>
CommitDate: Mon Aug 23 19:42:58 2021 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=1b56b409
sys-cluster/OpenHPC-meta: initial import
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 136 +++
sys-cluster/OpenHPC-meta/metadata.xml| 24
2 files changed, 160 insertions(+)
diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
new file mode 100644
index 0..60f3f98a1
--- /dev/null
+++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
@@ -0,0 +1,136 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{8..9} )
+
+inherit python-single-r1
+
+DESCRIPTION="OpenHPC metapackage"
+
+SLOT="0"
+LICENSE="GPL-2"
+HOMEPAGE="
+ https://openhpc.community
+ https://github.com/openhpc/ohpc
+"
+KEYWORDS="~amd64"
+IUSE="+io-libs +parallel +perf-tools +python +runtimes +serial +slurm-client
+slurm-server" #geopm warewulf
+
+#TODO: add metis/partition useflags in a way that doesn't pull in non-free
parmetis
+RDEPEND="
+ ${PYTHON_DEPS}
+ || ( sys-libs/libunwind sys-libs/llvm-libunwind )
+
+ sys-process/numactl
+ virtual/mpi
+
+ io-libs? (
+ sci-libs/hdf5[cxx,fortran,mpi]
+ sci-libs/netcdf[hdf5,mpi]
+ sci-libs/netcdf-cxx
+ sci-libs/netcdf-fortran
+ )
+
+ parallel? (
+ dev-libs/boost[mpi]
+ sci-libs/fftw[mpi]
+ sci-libs/hypre[mpi]
+ sci-libs/mumps[mpi,scotch]
+ sci-libs/scalapack
+ sci-libs/scotch[mpi,threads]
+ sci-libs/trilinos[boost,hypre,mumps,scotch,scalapack,petsc]
+ sci-mathematics/petsc[fftw,hypre,mpi,mumps,scotch]
+ sci-mathematics/slepc[mpi]
+
+ io-libs? (
+ sci-libs/trilinos[hdf5,netcdf]
+ sci-mathematics/petsc[hdf5]
+ )
+ python? (
+ $(python_gen_cond_dep
'dev-libs/boost[numpy,python,${PYTHON_USEDEP}]')
+ )
+ )
+
+ perf-tools? (
+ dev-libs/papi
+ sys-apps/likwid
+ sys-cluster/extrae[${PYTHON_SINGLE_USEDEP}]
+ )
+
+ python? (
+ $(python_gen_cond_dep '
+ dev-python/mpi4py[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/scipy[${PYTHON_USEDEP}]
+ ')
+ )
+
+ runtimes? (
+ sys-cluster/charliecloud[${PYTHON_SINGLE_USEDEP}]
+ sys-cluster/singularity
+ )
+
+ serial? (
+ dev-lang/R[lapack]
+ sci-libs/gsl[cblas-external]
+ sci-libs/metis
+ sci-libs/openblas[eselect-ldso]
+ sci-libs/superlu
+ )
+
+ slurm-client? (
+ sys-apps/hwloc
+ sys-cluster/slurm[numa,pam]
+ io-libs? ( sys-cluster/slurm[hdf5] )
+ )
+
+ slurm-server? (
+ sys-cluster/slurm[numa,perl,slurmdbd]
+ io-libs? ( sys-cluster/slurm[hdf5] )
+ )
+
+"
+# io-libs
+ #adios[mpi]
+ #pnetcdf[mpi]
+ #phdf5[mpi]
+
+# parallel
+ #sci-libs/superlu_dist
+ #opencoarrays
+ #mfem
+
+# perf-tools
+# sys-cluster/dimemas[libunwind]
+ #imb
+ #omb
+ #scalasca
+ #tau
+ #scorep
+
+# serial
+ #plasma
+
+# slurm-server
+ #pdsh-slurm
+
+ #geopm? (
+ #geopm[mpi]
+ #)
+
+ #warewulf? (
+ #warewulf-cluster
+ #warewulf-common-localdb
+ #warewulf-common
+ #warewulf-ipmi
+ #warewulf-ipmi-initramfs
+ #warewulf-provision
+ #warewulf-provision-initramfs
+ #warewulf-provision-server-ipxe
+ #warewulf-provision-server
+ #warewulf-vnfs
+ #)
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
diff --git a/sys-cluster/OpenHPC-meta/metadata.xml
b/sys-cluster/OpenHPC-meta/metadata.xml
new file mode 100644
index 0..9a1e87141
--- /dev/null
+++ b/sys-cluster/OpenHPC-meta/metadata.xml
@@ -0,0 +1,24 @@
+
+http://www.gentoo.org/dtd/metadata.dtd;>
+
+
+ lssndrbarbi...@gmail.com
+ Alessandro Barbieri
+
+
+ https://github.com/openhpc/ohpc/issues
+ openhpc/ohpc
+
+
+
+ Collection of IO libraries
+
[gentoo-commits] repo/proj/guru:master commit in: sys-cluster/OpenHPC-meta/
commit: 4e98a109896c5688be5a5da854ae01fcf8a94cb0
Author: Alessandro Barbieri gmail com>
AuthorDate: Mon Aug 23 21:05:12 2021 +
Commit: Andrew Ammerlaan gentoo org>
CommitDate: Mon Aug 23 21:05:12 2021 +
URL:https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=4e98a109
sys-cluster/OpenHPC-meta: add pdsh
Signed-off-by: Alessandro Barbieri gmail.com>
sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild | 1 +
1 file changed, 1 insertion(+)
diff --git a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
index 60f3f98a1..cf70ae4d2 100644
--- a/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
+++ b/sys-cluster/OpenHPC-meta/OpenHPC-meta-2.1.ebuild
@@ -23,6 +23,7 @@ RDEPEND="
${PYTHON_DEPS}
|| ( sys-libs/libunwind sys-libs/llvm-libunwind )
+ app-shells/pdsh
sys-process/numactl
virtual/mpi
