Re: [gmx-users] GFP Simulation

2010-09-09 Thread Veera Krasnenko
 Dear Gmxers,

 I am working on a new project and I plan to do some molecular dynamic
 simulation on an engineered GFP molecule. I have been searching for the
 parameters for the GFP chromophore without success. Could some one help
 me? Any
 reference or parameters will be appreciated.

Nathalie Reuter, Hai Lin,and Walter Thiel
Green Fluorescent Proteins: Empirical Force Field for the Neutral and
Deprotonated Forms of the Chromophore. Molecular Dynamics Simulations of
the Wild Type and S65T Mutant



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[gmx-users] GFP Simulation

2010-09-07 Thread Rama G
Dear Gmxers,

I am working on a new project and I plan to do some molecular dynamic 
simulation on an engineered GFP molecule. I have been searching for the 
parameters for the GFP chromophore without success. Could some one help me? Any 
reference or parameters will be appreciated.

Thanks,

Juju


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