A demo on Tuesday would be helpful for UIOWA. Thanks, BG From: Dan Connolly <dconno...@kumc.edu> Sent: Thursday, October 17, 2019 5:34 PM To: Gryzlak, Brian M <brian-gryz...@uiowa.edu>; gpc-dev@listserv.kumc.edu Subject: [External] Re: Babel/ DROC 55 question
Do you have PortQuery<https://informatics.gpcnetwork.org/trac/Project/wiki/PortQuery> installed? The "XML Message Stack" stuff is a little obscure. I can demo on Tuesday. PortQuery user directions 1. In the other i2b2 (i.e. babel): * Run a query. * Make sure debug mode is on: look for the Show XML Message Stack button: <>, especially in the top right Query Tool section. * Open the XML Message Stack and find the runQueryInstance_fromQueryDefinition message for your query (recent messages are at the bottom of the list) * Copy the query_definition element, including its tags. 1. Then, in this i2b2, * Paste below. * Hit Load Query below. * Select the Find Patients tab to see your query. Installation Installation follows the i2b2 plug-in install/register<https://community.i2b2.org/wiki/display/webclient/Web+Client+Plug-in+Developers+Guide> model. The deploy/add_to_site.py script can help: $ webclient=...htdocs/i2b2/webclient $ plugins=${webclient}/js-i2b2/cells/plugins $ mkdir -p ${plugins}/HERON $ unzip -q -o -d ${plugins}/HERON/PortQuery/ portaquery.zip $ python ${plugins}/WIP/PortQuery/deploy/add_to_cell.py PortQuery ${webclient}/js-i2b2/i2b2_loader https://bitbucket.org/DanC/portaquery/src/default/ <- https://informatics.gpcnetwork.org/trac/Project/wiki/PortQuery ________________________________ From: Gpc-dev <gpc-dev-boun...@listserv.kumc.edu<mailto:gpc-dev-boun...@listserv.kumc.edu>> on behalf of Gryzlak, Brian M <brian-gryz...@uiowa.edu<mailto:brian-gryz...@uiowa.edu>> Sent: Thursday, October 17, 2019 3:58 PM To: gpc-dev@listserv.kumc.edu<mailto:gpc-dev@listserv.kumc.edu> <gpc-dev@listserv.kumc.edu<mailto:gpc-dev@listserv.kumc.edu>> Subject: Babel/ DROC 55 question Hi everyone, Can someone advise UIOWA on how to grab queries in Babel in XML and run them on our local i2b2 instance? We have access to Babel and can copy the XML code for the DROC 55 request but can't figure out how to transfer that logic and run counts. Thanks, Brian Brian M. Gryzlak, MSW, MA Project Coordinator S414 CPHB 319.335.8218 The University of Iowa Iowa City, IA 52242 brian-gryz...@uiowa.edu<mailto:brian-gryz...@uiowa.edu> Health Effectiveness Research Center (HERCe)<http://www.public-health.uiowa.edu/herce/>
_______________________________________________ Gpc-dev mailing list Gpc-dev@listserv.kumc.edu http://listserv.kumc.edu/mailman/listinfo/gpc-dev
