gpc-dev 21 Apr agenda and meeing notes

[Dan Connolly]

What else for tomorrow?

UNMC is scheduled to scribe
https://docs.google.com/document/d/1IuLp9z_GWGGy2XnPsPhi6QzKsGZoPWwDIalPNWmdUUg/edit

agenda snapshot:


  1.  Convene, take roll, review records and plan next meeting(s)

 *   11:00 a.m. Central Time.
​Meeting ID and access code: 
817-393-381; call +1 
(571) 317-3131

 *   Roll; Reminder - put site after your name in 
GoToMeeting preferences
GPC DevTeams 
represented? KUMC (chair), UIOWA, MCW, MCRI, UNMC (scribe), UTHSCSA, UTSW, MU, 
IndianaU, Utah, Allina, Intermountain

 *   Comments on the agenda? (ref 
SoftwareDev#tracking)
 On last week’s 
notes?
 (#12)
Recent tickets 
opened/closed - FYI 
(i.e. not intended for discussion)

*   None this week

 *   Next meeting(s): Apr 28; scribe: UTSW? UTHSCSA?

*   Note scribe 
rotation
 appendix

  2.  Apr 2020 PCORnet CDM refresh: due Apr 27

 *   Done: 
UIOWA, 
UTHSCSA, 
Utah

 *   at-risk?

  3.  
milestone:covid19wk

 *   #759 
covid19 PCORNet 
datamarts

*   Debrief from COVID CDM Query #2 'fd1228_pmp_wp010_nsd3_v03_2020'
Based on Expanded inclusion 
criteria (right?)

   *   KUMC - done ~Apr 19

   *   UIOWA -

   *   MCW -

   *   MCRI -

   *   UNMC -

   *   UTHSCSA - weekly infeasible

   *   UTSW -

   *   MU -

   *   IndianaU - not planned

   *   Utah -

   *   Allina - done - expanded critieria 2x/week

   *   Intermountain -

 *   CDM+ in May for COVID19? revised 
SOW

 *   #758 
covid19 ACT nodes refreshed 
2x/week

*   KUMC working on DX mapping

*   KUMC working on [which?] new ontology

  4.  
Milestone:tumor-reg-18

 *   #739 HERON 
NAACCR ETL outdated by 
v18 - alpha


wash your hands 
...


--
Dan

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CDM+ in May for COVID19? revised SOW

[Dan Connolly]

Please estimate feasibility of tackling the attached revised state of work; for 
example, adding the elements in this table in the May time frame.


CDM+


Data element


Location in CDM (likely)


Inpatient vitals (respiratory rate, heart rate, O2 saturation, temperature)*


OBS_CLIN


Pulse oximetry/FiO2 ratio


OBS_CLIN


Admission to ICU


OBS_GEN or OBS_CLIN, depending on approach


Use of mechanical ventilation (beyond CPT code)


OBS_GEN or OBS_CLIN, depending on approach


Smoking status* (vaping status if available)


VITAL for smoking status; OBS_CLIN if vaping data available


Patient current address (especially zip – 5- or 9-digit)*


LDS_ADDRESS_HISTORY


Disposition* (already included in most datamarts)


ENCOUNTER


COVID-19 lab results (antigen & antibody)*


LAB_RESULT_CM


Chief complaint (Emergency Department)


CONDITION


Other labs relevant for COVID-19-related research*


LAB_RESULT_CM


*These data elements may already be available in the CDM for some datamarts; 
however, some items will need further investigation in order to define how best 
to represent them in the CDM.



We can discuss on the call tomorrow, but bonus points to anyone who replies in 
writing.



From: Russ Waitman 
Sent: Monday, April 20, 2020 8:47 AM
To: Dan Connolly 
Subject: COVID CDM revised SOW




COVID-19 Subset-CDM+_SOW.docx
Description: COVID-19 Subset-CDM+_SOW.docx
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