date:20161205

Re: [GRASS-dev] python port of r.denoise (testing required)

2016-12-05 Thread Anna Petrášová

Thank you for rewriting this, here is couple of brief observations.
The epsg option is currently required in the code, although it
shouldn't be necessary if you are in projected system. So it fails if
you don't specify it. Also it should probably respect nulls in the
input, now it results in -4e-06 instead of nulls.

Best,

Anna


On Mon, Dec 5, 2016 at 5:16 PM, Carlos Grohmann
 wrote:
> Ok,
>
> I used the html from the old module. Hadn’t realized that there was a
> specific order for things in the html. Sorry.
>
> Thanks for the fix, Martin.
>
> Carlos
>
>
>
> On 5 Dec 2016 20:13 -0200, Markus Neteler , wrote:
>
> On Mon, Dec 5, 2016 at 9:23 PM, Martin Landa  wrote:
>
> Hi,
>
> 2016-12-05 21:14 GMT+01:00 Carlos Grohmann :
>
> The module itself was installed (and runs fine), but not the html help
> page. What did I miss?
>
>
> Also for addons, please follow the documentation guidelines:
> https://trac.osgeo.org/grass/wiki/Submitting/Docs
>
> (I think that Martin already fixed most of it)
>
> Markus
>
>
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Re: [GRASS-dev] python port of r.denoise (testing required)

2016-12-05 Thread Carlos Grohmann

Ok,

I used the html from the old module. Hadn’t realized that there was a specific 
order for things in the html. Sorry.

Thanks for the fix, Martin.

Carlos



On 5 Dec 2016 20:13 -0200, Markus Neteler , wrote:
> On Mon, Dec 5, 2016 at 9:23 PM, Martin Landa  wrote:
> > Hi,
> >
> > 2016-12-05 21:14 GMT+01:00 Carlos Grohmann :
> > > The module itself was installed (and runs fine), but not the html help
> > > page. What did I miss?
>
> Also for addons, please follow the documentation guidelines:
> https://trac.osgeo.org/grass/wiki/Submitting/Docs
>
> (I think that Martin already fixed most of it)
>
> Markus
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Re: [GRASS-dev] python port of r.denoise (testing required)

2016-12-05 Thread Markus Neteler

On Mon, Dec 5, 2016 at 9:23 PM, Martin Landa  wrote:
> Hi,
>
> 2016-12-05 21:14 GMT+01:00 Carlos Grohmann :
>> The module itself  was installed (and runs fine), but not the html help
>> page. What did I miss?

Also for addons, please follow the documentation guidelines:
https://trac.osgeo.org/grass/wiki/Submitting/Docs

(I think that Martin already fixed most of it)

Markus
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Re: [GRASS-dev] i.segment gives different results in G72 and G73

2016-12-05 Thread Markus Metz

On Mon, Dec 5, 2016 at 10:56 PM, Markus Metz 
wrote:
>
>
> On Mon, Dec 5, 2016 at 3:01 PM, Martin Landa 
wrote:
> >
> > Hi,
> >
> > 2016-12-05 15:00 GMT+01:00 Markus Metz :
> > > It's very technical and explains differences between versions. I am
not sure
> > > if this should go into the user manual. The concept of region growing
is the
> > > same.
> >
> > probably could be useful at least to explain that different version of
> > GRASS can give different results... Ma
>
> Different GRASS versions can give different results for some modules
because of bug fixing and/or improvements. The explanation why the results
of the same module might differ between GRASS versions is that these are
different GRASS versions. We could add this information on the wiki

on trac

> to new or changed features in trunk.
>
> Markus M
>
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Re: [GRASS-dev] t.rast.out.xyz not exporting all cells in the computational region

2016-12-05 Thread Markus Neteler

Hi Vero,

On Wed, Nov 30, 2016 at 2:10 PM, Veronica Andreo  wrote:
> Hello devs,
>
> AFAIU, to activate the NULL export in r.out.xyz is then a trivial change,
> but we do not know which letter to use as flag because -n is already used to
> indicate the opposite behaviour (?). Is it too difficult to change default
> behaviour to export NULL values and keep then, the -n flag as in r.stats to
> not export/report NULL values?

attached a trivial (untested) patch make make r.out.xyz behave as the rest.
Please check:

patch -p0 < r.out.xyz.diff

cheers
Markus
Index: scripts/r.out.xyz/r.out.xyz.py
===
--- scripts/r.out.xyz/r.out.xyz.py  (revision 69968)
+++ scripts/r.out.xyz/r.out.xyz.py  (working copy)
@@ -32,6 +32,10 @@
 #%end
 #%option G_OPT_F_SEP
 #%end
+#%flag
+#% key: n
+#% description: Do not report no data value
+#%end
 
 import sys
 from grass.script import core as grass
@@ -41,8 +45,13 @@
 def main():
 # if no output filename, output to stdout
 output = options['output']
+skipnodata = flags['n']
 
-parameters = dict(flags="1gn",
+if skipnodata:
+   statsflags="1gn"
+else:
+   statsflags="1g"
+parameters = dict(flags=statsflags,
   input=options['input'],
   separator=options['separator'])
 if output:
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Re: [GRASS-dev] i.segment gives different results in G72 and G73

2016-12-05 Thread Markus Metz

On Mon, Dec 5, 2016 at 3:01 PM, Martin Landa  wrote:
>
> Hi,
>
> 2016-12-05 15:00 GMT+01:00 Markus Metz :
> > It's very technical and explains differences between versions. I am not
sure
> > if this should go into the user manual. The concept of region growing
is the
> > same.
>
> probably could be useful at least to explain that different version of
> GRASS can give different results... Ma

Different GRASS versions can give different results for some modules
because of bug fixing and/or improvements. The explanation why the results
of the same module might differ between GRASS versions is that these are
different GRASS versions. We could add this information on the wiki to new
or changed features in trunk.

Markus M
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Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Michael Barton

That's what I need to create a longer long. Thanks


C. Michael Barton
Director, Center for Social Dynamics & Complexity 
Professor of Anthropology, School of Human Evolution & Social Change
Head, Graduate Faculty in Complex Adaptive Systems Science
Arizona State University

voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu















> On Dec 5, 2016, at 2:43 PM, Martin Landa  wrote:
> 
> 2016-12-05 22:41 GMT+01:00 Michael Barton :
>> That's the the whole thing. IIRC, I can get a longer log with a switch to 
>> make but I can't remember off hand. If you tell me I'll run it while I head 
>> to class.
> 
> no, it's not the whole thing.
> 
> make distclean
> ./configure...
> 
> make 2>&1 > make.log
> 
> Sent created `make.log`. Ma
> 
> 
>> 
 grass-interface.dtd
>>> 
>>> that's obviously the problem. Please send me the full compilation log,
>>> I hope I could find something there.
>>> 
 
 Michael
 
 
 
 C. Michael Barton
 Director, Center for Social Dynamics & Complexity
 Professor of Anthropology, School of Human Evolution & Social Change
 Head, Graduate Faculty in Complex Adaptive Systems Science
 Arizona State University
 
 voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
 fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
 www: 
 https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=trfWM24eHCIJuv-5HtnHbYhrw_DhjOl8tklxdwinP9Y=F33_k7g8oQHVwvmSEgNha12WYpAbCgNlO0pygNnY5CA=
  , 
 https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=trfWM24eHCIJuv-5HtnHbYhrw_DhjOl8tklxdwinP9Y=3mWLR_h5YLzv1JXuZuo7xzFQbPMRSe76s3H0FHvouNE=
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
> On Dec 5, 2016, at 12:08 PM, Anna Petrášová  wrote:
> 
> On Mon, Dec 5, 2016 at 2:00 PM, Michael Barton 
> wrote:
>> I just did this morning. Same problem. No errors in compiling, only in
>> running.
> g
> 
> Have you checked carefully the gui part of the compilation output?
> It's long and the errors are easy to overlook, so I want to make sure.
> What files do you have in GRASS-7.2/Contents/MacOS/gui/wxpython/xml ?
> Is any of them empty?
> 
> 
> 
>> 
>> Michael
>> 
>> C. Michael Barton
>> Director, Center for Social Dynamics & Complexity
>> Professor of Anthropology, School of Human Evolution & Social Change
>> Head, Graduate Faculty in Complex Adaptive Systems Science
>> Arizona State University
>> 
>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>> www:
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=WOVKug_u69HERAVcBaXjQoUJWB8TmnLwAapaz0X8qug=
>> ,
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=BurW7at-ZQccpdBaiz13Wq-XTDW5dcwAy5FMysM2hVs=
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>>> On Dec 5, 2016, at 11:56 AM, Anna Petrášová 
>>> wrote:
>>> 
>>> On Mon, Dec 5, 2016 at 1:52 PM, Michael Barton 
>>> wrote:
 You mean addons on my local machine or something else?
>>> 
>>> The more I Iook at it, the addons have nothing to do with it. Just try
>>> to compile it again, there should be some error. BTW, there is no
>>> difference in toolboxes code in trunk and 72.
>>> 
>>> Anna
>>> 
 
 Michael
 
 C. Michael Barton
 Director, Center for Social Dynamics & Complexity
 Professor of Anthropology, School of Human Evolution & Social Change
 Head, Graduate Faculty in Complex Adaptive Systems Science
 Arizona State University
 
 voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
 fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
 www:

Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Martin Landa

2016-12-05 22:41 GMT+01:00 Michael Barton :
> That's the the whole thing. IIRC, I can get a longer log with a switch to 
> make but I can't remember off hand. If you tell me I'll run it while I head 
> to class.

no, it's not the whole thing.

make distclean
./configure...

make 2>&1 > make.log

Sent created `make.log`. Ma


>
>>> grass-interface.dtd
>>
>> that's obviously the problem. Please send me the full compilation log,
>> I hope I could find something there.
>>
>>>
>>> Michael
>>>
>>>
>>> 
>>> C. Michael Barton
>>> Director, Center for Social Dynamics & Complexity
>>> Professor of Anthropology, School of Human Evolution & Social Change
>>> Head, Graduate Faculty in Complex Adaptive Systems Science
>>> Arizona State University
>>>
>>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>>> www: 
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=trfWM24eHCIJuv-5HtnHbYhrw_DhjOl8tklxdwinP9Y=F33_k7g8oQHVwvmSEgNha12WYpAbCgNlO0pygNnY5CA=
>>>  , 
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=trfWM24eHCIJuv-5HtnHbYhrw_DhjOl8tklxdwinP9Y=3mWLR_h5YLzv1JXuZuo7xzFQbPMRSe76s3H0FHvouNE=
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
 On Dec 5, 2016, at 12:08 PM, Anna Petrášová  wrote:

 On Mon, Dec 5, 2016 at 2:00 PM, Michael Barton 
 wrote:
> I just did this morning. Same problem. No errors in compiling, only in
> running.
 g

 Have you checked carefully the gui part of the compilation output?
 It's long and the errors are easy to overlook, so I want to make sure.
 What files do you have in GRASS-7.2/Contents/MacOS/gui/wxpython/xml ?
 Is any of them empty?



>
> Michael
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www:
> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=WOVKug_u69HERAVcBaXjQoUJWB8TmnLwAapaz0X8qug=
> ,
> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=BurW7at-ZQccpdBaiz13Wq-XTDW5dcwAy5FMysM2hVs=
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>> On Dec 5, 2016, at 11:56 AM, Anna Petrášová 
>> wrote:
>>
>> On Mon, Dec 5, 2016 at 1:52 PM, Michael Barton 
>> wrote:
>>> You mean addons on my local machine or something else?
>>
>> The more I Iook at it, the addons have nothing to do with it. Just try
>> to compile it again, there should be some error. BTW, there is no
>> difference in toolboxes code in trunk and 72.
>>
>> Anna
>>
>>>
>>> Michael
>>> 
>>> C. Michael Barton
>>> Director, Center for Social Dynamics & Complexity
>>> Professor of Anthropology, School of Human Evolution & Social Change
>>> Head, Graduate Faculty in Complex Adaptive Systems Science
>>> Arizona State University
>>>
>>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>>> www:
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=xt9rzbPn-6JhkZOF0oRZ4xAytf77ans2GhLJoux9rvw=
>>> ,
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=B0867aqcIFuHWb3i8Cjf90d0V3_4w2hGp_ANetJlZHk=
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
 On Dec 5, 2016, at 11:49 AM, Anna Petrášová 
 wrote:

 On Mon, Dec 5, 2016 at 1:24 PM, Michael Barton
  wrote:
> Just a reminder.
>
> GRASS 7.2RC2 does not run on the

Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Michael Barton

That's the the whole thing. IIRC, I can get a longer log with a switch to make 
but I can't remember off hand. If you tell me I'll run it while I head to class.

Michael

C. Michael Barton
Director, Center for Social Dynamics & Complexity 
Professor of Anthropology, School of Human Evolution & Social Change
Head, Graduate Faculty in Complex Adaptive Systems Science
Arizona State University

voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu















> On Dec 5, 2016, at 1:36 PM, Anna Petrášová  wrote:
> 
> On Mon, Dec 5, 2016 at 2:28 PM, Michael Barton  wrote:
>> No errors at all in the compiler log (attached).
> 
> that's just the end of it
> 
>> 
>> The only thing in GRASS-7.2/Contents/MacOS/gui/wxpython/xml/ is
>> 
>> grass-interface.dtd
> 
> that's obviously the problem. Please send me the full compilation log,
> I hope I could find something there.
> 
>> 
>> Michael
>> 
>> 
>> 
>> C. Michael Barton
>> Director, Center for Social Dynamics & Complexity
>> Professor of Anthropology, School of Human Evolution & Social Change
>> Head, Graduate Faculty in Complex Adaptive Systems Science
>> Arizona State University
>> 
>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>> www: 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=trfWM24eHCIJuv-5HtnHbYhrw_DhjOl8tklxdwinP9Y=F33_k7g8oQHVwvmSEgNha12WYpAbCgNlO0pygNnY5CA=
>>  , 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=trfWM24eHCIJuv-5HtnHbYhrw_DhjOl8tklxdwinP9Y=3mWLR_h5YLzv1JXuZuo7xzFQbPMRSe76s3H0FHvouNE=
>>  
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>>> On Dec 5, 2016, at 12:08 PM, Anna Petrášová  wrote:
>>> 
>>> On Mon, Dec 5, 2016 at 2:00 PM, Michael Barton 
>>> wrote:
 I just did this morning. Same problem. No errors in compiling, only in
 running.
>>> g
>>> 
>>> Have you checked carefully the gui part of the compilation output?
>>> It's long and the errors are easy to overlook, so I want to make sure.
>>> What files do you have in GRASS-7.2/Contents/MacOS/gui/wxpython/xml ?
>>> Is any of them empty?
>>> 
>>> 
>>> 
 
 Michael
 
 C. Michael Barton
 Director, Center for Social Dynamics & Complexity
 Professor of Anthropology, School of Human Evolution & Social Change
 Head, Graduate Faculty in Complex Adaptive Systems Science
 Arizona State University
 
 voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
 fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
 www:
 https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=WOVKug_u69HERAVcBaXjQoUJWB8TmnLwAapaz0X8qug=
 ,
 https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=BurW7at-ZQccpdBaiz13Wq-XTDW5dcwAy5FMysM2hVs=
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
> On Dec 5, 2016, at 11:56 AM, Anna Petrášová 
> wrote:
> 
> On Mon, Dec 5, 2016 at 1:52 PM, Michael Barton 
> wrote:
>> You mean addons on my local machine or something else?
> 
> The more I Iook at it, the addons have nothing to do with it. Just try
> to compile it again, there should be some error. BTW, there is no
> difference in toolboxes code in trunk and 72.
> 
> Anna
> 
>> 
>> Michael
>> 
>> C. Michael Barton
>> Director, Center for Social Dynamics & Complexity
>> Professor of Anthropology, School of Human Evolution & Social Change
>> Head, Graduate Faculty in Complex Adaptive Systems Science
>> Arizona State University
>> 
>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>> www:
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=xt9rzbPn-6JhkZOF0oRZ4xAytf77ans2GhLJoux9rvw=
>> ,
>>

Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Anna Petrášová

On Mon, Dec 5, 2016 at 2:28 PM, Michael Barton  wrote:
> No errors at all in the compiler log (attached).

that's just the end of it

>
> The only thing in GRASS-7.2/Contents/MacOS/gui/wxpython/xml/ is
>
> grass-interface.dtd

that's obviously the problem. Please send me the full compilation log,
I hope I could find something there.

>
> Michael
>
>
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu
>
>
>
>
>
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>
>> On Dec 5, 2016, at 12:08 PM, Anna Petrášová  wrote:
>>
>> On Mon, Dec 5, 2016 at 2:00 PM, Michael Barton 
>> wrote:
>>> I just did this morning. Same problem. No errors in compiling, only in
>>> running.
>> g
>>
>> Have you checked carefully the gui part of the compilation output?
>> It's long and the errors are easy to overlook, so I want to make sure.
>> What files do you have in GRASS-7.2/Contents/MacOS/gui/wxpython/xml ?
>> Is any of them empty?
>>
>>
>>
>>>
>>> Michael
>>> 
>>> C. Michael Barton
>>> Director, Center for Social Dynamics & Complexity
>>> Professor of Anthropology, School of Human Evolution & Social Change
>>> Head, Graduate Faculty in Complex Adaptive Systems Science
>>> Arizona State University
>>>
>>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>>> www:
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=WOVKug_u69HERAVcBaXjQoUJWB8TmnLwAapaz0X8qug=
>>> ,
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=BurW7at-ZQccpdBaiz13Wq-XTDW5dcwAy5FMysM2hVs=
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
 On Dec 5, 2016, at 11:56 AM, Anna Petrášová 
 wrote:

 On Mon, Dec 5, 2016 at 1:52 PM, Michael Barton 
 wrote:
> You mean addons on my local machine or something else?

 The more I Iook at it, the addons have nothing to do with it. Just try
 to compile it again, there should be some error. BTW, there is no
 difference in toolboxes code in trunk and 72.

 Anna

>
> Michael
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www:
> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=xt9rzbPn-6JhkZOF0oRZ4xAytf77ans2GhLJoux9rvw=
> ,
> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=B0867aqcIFuHWb3i8Cjf90d0V3_4w2hGp_ANetJlZHk=
>
>
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>
>
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>
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>
>> On Dec 5, 2016, at 11:49 AM, Anna Petrášová 
>> wrote:
>>
>> On Mon, Dec 5, 2016 at 1:24 PM, Michael Barton
>>  wrote:
>>> Just a reminder.
>>>
>>> GRASS 7.2RC2 does not run on the Mac.
>>>
>>> Other versions, include recent 7.3 (I have not tried to compile since
>>> September) do work fine. No errors compiling, but I get the error
>>> below when
>>> I try to run it. Any advice would be helpful.
>>
>> I've just compiled it on Mac and it ran just fine. Since the error
>> comes from the addon toolboxes, what kind of addons do you have
>> installed? I suggest to recompile and check if there are any errors in
>> the compilation output.
>>
>> Anna
>>
>>>
>>> Michael
>>> 
>>> C. Michael Barton
>>> Director, Center for Social Dynamics & Complexity
>>> Professor of Anthropology, School of Human Evolution & Social Change
>>> Head, Graduate Faculty in Complex Adaptive Systems Science
>>> Arizona State University
>>>
>>> voice:

Re: [GRASS-dev] python port of r.denoise (testing required)

2016-12-05 Thread Martin Landa

Hi,

2016-12-05 21:14 GMT+01:00 Carlos Grohmann :
> The module itself  was installed (and runs fine), but not the html help
> page. What did I miss?

there was syntax error, fixed in r70008. Ma

-- 
Martin Landa
http://geo.fsv.cvut.cz/gwiki/Landa
http://gismentors.cz/mentors/landa
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Re: [GRASS-dev] python port of r.denoise (testing required)

2016-12-05 Thread Carlos Grohmann

I added a Makefile (adapted from r.roughness.vector), and also went and 
uploaded to SVN.

I’m not used to commiting to SVN so this is what I did:

- checked out the add-ons with svn
- created r.denoise dir
- added the files
- changed description.html to r.denoise.html
- remembered that I should’ve run module_svn_propset.sh, so I did this
- commited the changes

Then I tried to install it with g.extension but it didn’t worked:

g.extension r.denoise
Fetching  from GRASS GIS Addons repository (be patient)...
Compiling...
/var/folders/y9/mnj7kbf10pl0zfs74d03sz94gn/T/grass7-guano-54185/tmptOIYEY/r.denoise/docs/html/r.denoise.html:75:0:
 Error (IndexError('pop from empty list',)): r.denoise requires 
that mdenoise, the executable version of Sun et al.'s (2007) denoising 
algorithm, is available on the $PATH.  mdenoise can be compiled and 
installed as follows:

make: *** 
[/var/folders/y9/mnj7kbf10pl0zfs74d03sz94gn/T/grass7-guano-54185/tmptOIYEY/r.denoise/docs/man/man1/r.denoise.1]
 Error 1
ERROR: Compilation failed, sorry. Please check above error messages.
GRASS 7.2.0svn (latlong):~ >

The module itself  was installed (and runs fine), but not the html help page. 
What did I miss?

thanks

Carlos

--
Prof. Carlos Henrique Grohmann
Institute of Energy and Environment - Univ. of São Paulo, Brazil
- Digital Terrain Analysis | GIS | Remote Sensing -

carlosgrohmann.com
http://orcid.org/-0001-5073-5572

Can’t stop the signal.

On 5 Dec 2016 14:42 -0200, Markus Neteler , wrote:
> On Fri, Dec 2, 2016 at 4:22 PM, Carlos Grohmann
>  wrote:
> > Hello all.
> >
> > I just finished porting r.denoise to python, but before uploading it to the
> > add-ons, I would welcome any testing.
> >
> > The module is available here:
> > https://github.com/CarlosGrohmann/grass_gis/tree/master/r_denoise_py
>
> Please add a Makefile as well.
> In addition, you may consider to add the download and compilation of
> the needed mdenoise to the Makefile.
>
> Markus
>
> --
> Markus Neteler
> http://www.mundialis.de - free data with free software
> http://grass.osgeo.org
> http://courses.neteler.org/blog
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Re: [GRASS-dev] i.segment gives different results in G72 and G73

2016-12-05 Thread Moritz Lennert


On 05/12/16 14:52, Markus Metz wrote:



On Mon, Dec 5, 2016 at 1:46 PM, Martin Landa > wrote:


Hi,

2016-12-05 9:09 GMT+01:00 Moritz Lennert >:

> What colleagues here have also noticed is that between the versions

(but I can't remember if it was 7.0 vs 7.3 or 7.2 vs 7.3) quite
different thresholds were needed to reach similar segmentation results.
In 7.3 reasonable thresholds are often an order of magnitude lower, i.e.
0.001 instead of 0.01...


this wasn't my case.


I am also getting very similar results with the same threshold. Can your
colleagues provide an example where such different thresholds need to be
used to obtain comparable results?



I've asked them if they can prepare and exemple and maybe send it to you 
offlist.


Moritz
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Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Michael Barton

No errors at all in the compiler log (attached).

The only thing in GRASS-7.2/Contents/MacOS/gui/wxpython/xml/ is

grass-interface.dtd

Michael



C. Michael Barton
Director, Center for Social Dynamics & Complexity
Professor of Anthropology, School of Human Evolution & Social Change
Head, Graduate Faculty in Complex Adaptive Systems Science
Arizona State University

voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu















> On Dec 5, 2016, at 12:08 PM, Anna Petrášová  wrote:
>
> On Mon, Dec 5, 2016 at 2:00 PM, Michael Barton  wrote:
>> I just did this morning. Same problem. No errors in compiling, only in 
>> running.
> g
>
> Have you checked carefully the gui part of the compilation output?
> It's long and the errors are easy to overlook, so I want to make sure.
> What files do you have in GRASS-7.2/Contents/MacOS/gui/wxpython/xml ?
> Is any of them empty?
>
>
>
>>
>> Michael
>> 
>> C. Michael Barton
>> Director, Center for Social Dynamics & Complexity
>> Professor of Anthropology, School of Human Evolution & Social Change
>> Head, Graduate Faculty in Complex Adaptive Systems Science
>> Arizona State University
>>
>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>> www: 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=WOVKug_u69HERAVcBaXjQoUJWB8TmnLwAapaz0X8qug=
>>  , 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=bBpzPDoS_3Ggj3kC_b9oXWPv1lSAOrSn-2Hm0wfY1jc=BurW7at-ZQccpdBaiz13Wq-XTDW5dcwAy5FMysM2hVs=
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>> On Dec 5, 2016, at 11:56 AM, Anna Petrášová  wrote:
>>>
>>> On Mon, Dec 5, 2016 at 1:52 PM, Michael Barton  
>>> wrote:
 You mean addons on my local machine or something else?
>>>
>>> The more I Iook at it, the addons have nothing to do with it. Just try
>>> to compile it again, there should be some error. BTW, there is no
>>> difference in toolboxes code in trunk and 72.
>>>
>>> Anna
>>>

 Michael
 
 C. Michael Barton
 Director, Center for Social Dynamics & Complexity
 Professor of Anthropology, School of Human Evolution & Social Change
 Head, Graduate Faculty in Complex Adaptive Systems Science
 Arizona State University

 voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
 fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
 www: 
 https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=xt9rzbPn-6JhkZOF0oRZ4xAytf77ans2GhLJoux9rvw=
  , 
 https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=B0867aqcIFuHWb3i8Cjf90d0V3_4w2hGp_ANetJlZHk=















> On Dec 5, 2016, at 11:49 AM, Anna Petrášová  wrote:
>
> On Mon, Dec 5, 2016 at 1:24 PM, Michael Barton  
> wrote:
>> Just a reminder.
>>
>> GRASS 7.2RC2 does not run on the Mac.
>>
>> Other versions, include recent 7.3 (I have not tried to compile since
>> September) do work fine. No errors compiling, but I get the error below 
>> when
>> I try to run it. Any advice would be helpful.
>
> I've just compiled it on Mac and it ran just fine. Since the error
> comes from the addon toolboxes, what kind of addons do you have
> installed? I suggest to recompile and check if there are any errors in
> the compilation output.
>
> Anna
>
>>
>> Michael
>> 
>> C. Michael Barton
>> Director, Center for Social Dynamics & Complexity
>> Professor of Anthropology, School of Human Evolution & Social Change
>> Head, Graduate Faculty in Complex Adaptive Systems Science
>> Arizona State University
>>
>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>> www: 
>>

Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Anna Petrášová

On Mon, Dec 5, 2016 at 2:00 PM, Michael Barton  wrote:
> I just did this morning. Same problem. No errors in compiling, only in 
> running.
g

Have you checked carefully the gui part of the compilation output?
It's long and the errors are easy to overlook, so I want to make sure.
What files do you have in GRASS-7.2/Contents/MacOS/gui/wxpython/xml ?
Is any of them empty?



>
> Michael
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>> On Dec 5, 2016, at 11:56 AM, Anna Petrášová  wrote:
>>
>> On Mon, Dec 5, 2016 at 1:52 PM, Michael Barton  
>> wrote:
>>> You mean addons on my local machine or something else?
>>
>> The more I Iook at it, the addons have nothing to do with it. Just try
>> to compile it again, there should be some error. BTW, there is no
>> difference in toolboxes code in trunk and 72.
>>
>> Anna
>>
>>>
>>> Michael
>>> 
>>> C. Michael Barton
>>> Director, Center for Social Dynamics & Complexity
>>> Professor of Anthropology, School of Human Evolution & Social Change
>>> Head, Graduate Faculty in Complex Adaptive Systems Science
>>> Arizona State University
>>>
>>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>>> www: 
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=xt9rzbPn-6JhkZOF0oRZ4xAytf77ans2GhLJoux9rvw=
>>>  , 
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=B0867aqcIFuHWb3i8Cjf90d0V3_4w2hGp_ANetJlZHk=
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
 On Dec 5, 2016, at 11:49 AM, Anna Petrášová  wrote:

 On Mon, Dec 5, 2016 at 1:24 PM, Michael Barton  
 wrote:
> Just a reminder.
>
> GRASS 7.2RC2 does not run on the Mac.
>
> Other versions, include recent 7.3 (I have not tried to compile since
> September) do work fine. No errors compiling, but I get the error below 
> when
> I try to run it. Any advice would be helpful.

 I've just compiled it on Mac and it ran just fine. Since the error
 comes from the addon toolboxes, what kind of addons do you have
 installed? I suggest to recompile and check if there are any errors in
 the compilation output.

 Anna

>
> Michael
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www: 
> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=fG_nZiBNPANgQlxr45MZoW7b4hsq55ZBxX9iuPaePIo=
>  , 
> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=VxZo-g4_6S_iSUp9AKDAJPo7RvtgrHZ2s_mywOGLdsE=
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
> On Nov 29, 2016, at 1:53 PM, Michael Barton  
> wrote:
>
> Yesterday I compiled GRASS 7.2 RC2 with no errors. Today I tried to test 
> it
> before posting and got the following error:
>
> GRASS 7.2.0RC2 (Global_latlon):~ > Traceback (most recent call last):
> File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 158, in 
>   sys.exit(main())
> File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 145, in main
>   app = GMApp(workspaceFile)
> File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 48, in __init__
>   wx.App.__init__(self, False)
> File
> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
> line 7981, in __init__
>

Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Michael Barton

I just did this morning. Same problem. No errors in compiling, only in running.

Michael

C. Michael Barton
Director, Center for Social Dynamics & Complexity 
Professor of Anthropology, School of Human Evolution & Social Change
Head, Graduate Faculty in Complex Adaptive Systems Science
Arizona State University

voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu















> On Dec 5, 2016, at 11:56 AM, Anna Petrášová  wrote:
> 
> On Mon, Dec 5, 2016 at 1:52 PM, Michael Barton  wrote:
>> You mean addons on my local machine or something else?
> 
> The more I Iook at it, the addons have nothing to do with it. Just try
> to compile it again, there should be some error. BTW, there is no
> difference in toolboxes code in trunk and 72.
> 
> Anna
> 
>> 
>> Michael
>> 
>> C. Michael Barton
>> Director, Center for Social Dynamics & Complexity
>> Professor of Anthropology, School of Human Evolution & Social Change
>> Head, Graduate Faculty in Complex Adaptive Systems Science
>> Arizona State University
>> 
>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>> www: 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=xt9rzbPn-6JhkZOF0oRZ4xAytf77ans2GhLJoux9rvw=
>>  , 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIFaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=1Q8NyOaJG6sOJwStQUePXvYtAPCxEk3JLrhBoC7Ezso=B0867aqcIFuHWb3i8Cjf90d0V3_4w2hGp_ANetJlZHk=
>>  
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>>> On Dec 5, 2016, at 11:49 AM, Anna Petrášová  wrote:
>>> 
>>> On Mon, Dec 5, 2016 at 1:24 PM, Michael Barton  
>>> wrote:
 Just a reminder.
 
 GRASS 7.2RC2 does not run on the Mac.
 
 Other versions, include recent 7.3 (I have not tried to compile since
 September) do work fine. No errors compiling, but I get the error below 
 when
 I try to run it. Any advice would be helpful.
>>> 
>>> I've just compiled it on Mac and it ran just fine. Since the error
>>> comes from the addon toolboxes, what kind of addons do you have
>>> installed? I suggest to recompile and check if there are any errors in
>>> the compilation output.
>>> 
>>> Anna
>>> 
 
 Michael
 
 C. Michael Barton
 Director, Center for Social Dynamics & Complexity
 Professor of Anthropology, School of Human Evolution & Social Change
 Head, Graduate Faculty in Complex Adaptive Systems Science
 Arizona State University
 
 voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
 fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
 www: 
 https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=fG_nZiBNPANgQlxr45MZoW7b4hsq55ZBxX9iuPaePIo=
  , 
 https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=VxZo-g4_6S_iSUp9AKDAJPo7RvtgrHZ2s_mywOGLdsE=
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 On Nov 29, 2016, at 1:53 PM, Michael Barton  wrote:
 
 Yesterday I compiled GRASS 7.2 RC2 with no errors. Today I tried to test it
 before posting and got the following error:
 
 GRASS 7.2.0RC2 (Global_latlon):~ > Traceback (most recent call last):
 File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
 line 158, in 
   sys.exit(main())
 File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
 line 145, in main
   app = GMApp(workspaceFile)
 File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
 line 48, in __init__
   wx.App.__init__(self, False)
 File
 "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
 line 7981, in __init__
   self._BootstrapApp()
 File
 "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
 line 7555, in _BootstrapApp
   return _core_.PyApp__BootstrapApp(*args, **kwargs)
 File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
 line 92, in OnInit
   workspace=self.workspaceFile)
 File

Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Anna Petrášová

On Mon, Dec 5, 2016 at 1:52 PM, Michael Barton  wrote:
> You mean addons on my local machine or something else?

The more I Iook at it, the addons have nothing to do with it. Just try
to compile it again, there should be some error. BTW, there is no
difference in toolboxes code in trunk and 72.

Anna

>
> Michael
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>> On Dec 5, 2016, at 11:49 AM, Anna Petrášová  wrote:
>>
>> On Mon, Dec 5, 2016 at 1:24 PM, Michael Barton  
>> wrote:
>>> Just a reminder.
>>>
>>> GRASS 7.2RC2 does not run on the Mac.
>>>
>>> Other versions, include recent 7.3 (I have not tried to compile since
>>> September) do work fine. No errors compiling, but I get the error below when
>>> I try to run it. Any advice would be helpful.
>>
>> I've just compiled it on Mac and it ran just fine. Since the error
>> comes from the addon toolboxes, what kind of addons do you have
>> installed? I suggest to recompile and check if there are any errors in
>> the compilation output.
>>
>> Anna
>>
>>>
>>> Michael
>>> 
>>> C. Michael Barton
>>> Director, Center for Social Dynamics & Complexity
>>> Professor of Anthropology, School of Human Evolution & Social Change
>>> Head, Graduate Faculty in Complex Adaptive Systems Science
>>> Arizona State University
>>>
>>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>>> www: 
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=fG_nZiBNPANgQlxr45MZoW7b4hsq55ZBxX9iuPaePIo=
>>>  , 
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=VxZo-g4_6S_iSUp9AKDAJPo7RvtgrHZ2s_mywOGLdsE=
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>> On Nov 29, 2016, at 1:53 PM, Michael Barton  wrote:
>>>
>>> Yesterday I compiled GRASS 7.2 RC2 with no errors. Today I tried to test it
>>> before posting and got the following error:
>>>
>>> GRASS 7.2.0RC2 (Global_latlon):~ > Traceback (most recent call last):
>>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>>> line 158, in 
>>>sys.exit(main())
>>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>>> line 145, in main
>>>app = GMApp(workspaceFile)
>>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>>> line 48, in __init__
>>>wx.App.__init__(self, False)
>>>  File
>>> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
>>> line 7981, in __init__
>>>self._BootstrapApp()
>>>  File
>>> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
>>> line 7555, in _BootstrapApp
>>>return _core_.PyApp__BootstrapApp(*args, **kwargs)
>>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>>> line 92, in OnInit
>>>workspace=self.workspaceFile)
>>>  File
>>> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/frame.py",
>>> line 129, in __init__
>>>self._menuTreeBuilder = LayerManagerMenuData()
>>>  File
>>> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/menudata.py",
>>> line 42, in __init__
>>>self, filename, expandAddons=expandAddons)
>>>  File
>>> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/core/menutree.py",
>>> line 65, in __init__
>>>xmlTree = etree.parse(filename)
>>>  File
>>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>>> line 1182, in parse
>>>tree.parse(source, parser)
>>>  File
>>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>>> line 657, in parse
>>>self._root = parser.close()
>>>  File
>>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>>> line 1654, in close
>>>self._raiseerror(v)
>>>  File
>>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>>> line 1506, in _raiseerror
>>>raise err
>>> xml.etree.ElementTree.ParseError: no element found: line 1, column 0
>>>
>>> Any idea what this is?
>>>
>>> Michael
>>>

Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Martin Landa

2016-12-05 19:52 GMT+01:00 Michael Barton :
> You mean addons on my local machine or something else?

Compiled addons are always local. Ma

>> On Mon, Dec 5, 2016 at 1:24 PM, Michael Barton  
>> wrote:
>>> Just a reminder.
>>>
>>> GRASS 7.2RC2 does not run on the Mac.
>>>
>>> Other versions, include recent 7.3 (I have not tried to compile since
>>> September) do work fine. No errors compiling, but I get the error below when
>>> I try to run it. Any advice would be helpful.
>>
>> I've just compiled it on Mac and it ran just fine. Since the error
>> comes from the addon toolboxes, what kind of addons do you have
>> installed? I suggest to recompile and check if there are any errors in
>> the compilation output.
>>
>> Anna
>>
>>>
>>> Michael
>>> 
>>> C. Michael Barton
>>> Director, Center for Social Dynamics & Complexity
>>> Professor of Anthropology, School of Human Evolution & Social Change
>>> Head, Graduate Faculty in Complex Adaptive Systems Science
>>> Arizona State University
>>>
>>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>>> www: 
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=fG_nZiBNPANgQlxr45MZoW7b4hsq55ZBxX9iuPaePIo=
>>>  , 
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=VxZo-g4_6S_iSUp9AKDAJPo7RvtgrHZ2s_mywOGLdsE=
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>> On Nov 29, 2016, at 1:53 PM, Michael Barton  wrote:
>>>
>>> Yesterday I compiled GRASS 7.2 RC2 with no errors. Today I tried to test it
>>> before posting and got the following error:
>>>
>>> GRASS 7.2.0RC2 (Global_latlon):~ > Traceback (most recent call last):
>>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>>> line 158, in 
>>>sys.exit(main())
>>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>>> line 145, in main
>>>app = GMApp(workspaceFile)
>>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>>> line 48, in __init__
>>>wx.App.__init__(self, False)
>>>  File
>>> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
>>> line 7981, in __init__
>>>self._BootstrapApp()
>>>  File
>>> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
>>> line 7555, in _BootstrapApp
>>>return _core_.PyApp__BootstrapApp(*args, **kwargs)
>>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>>> line 92, in OnInit
>>>workspace=self.workspaceFile)
>>>  File
>>> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/frame.py",
>>> line 129, in __init__
>>>self._menuTreeBuilder = LayerManagerMenuData()
>>>  File
>>> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/menudata.py",
>>> line 42, in __init__
>>>self, filename, expandAddons=expandAddons)
>>>  File
>>> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/core/menutree.py",
>>> line 65, in __init__
>>>xmlTree = etree.parse(filename)
>>>  File
>>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>>> line 1182, in parse
>>>tree.parse(source, parser)
>>>  File
>>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>>> line 657, in parse
>>>self._root = parser.close()
>>>  File
>>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>>> line 1654, in close
>>>self._raiseerror(v)
>>>  File
>>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>>> line 1506, in _raiseerror
>>>raise err
>>> xml.etree.ElementTree.ParseError: no element found: line 1, column 0
>>>
>>> Any idea what this is?
>>>
>>> Michael
>>> 
>>> C. Michael Barton
>>> Director, Center for Social Dynamics & Complexity
>>> Professor of Anthropology, School of Human Evolution & Social Change
>>> Head, Graduate Faculty in Complex Adaptive Systems Science
>>> Arizona State University
>>>
>>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>>> www: 
>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=fG_nZiBNPANgQlxr45MZoW7b4hsq55ZBxX9iuPaePIo=
>>>  , 
>>>

Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Michael Barton

You mean addons on my local machine or something else?

Michael

C. Michael Barton
Director, Center for Social Dynamics & Complexity 
Professor of Anthropology, School of Human Evolution & Social Change
Head, Graduate Faculty in Complex Adaptive Systems Science
Arizona State University

voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu















> On Dec 5, 2016, at 11:49 AM, Anna Petrášová  wrote:
> 
> On Mon, Dec 5, 2016 at 1:24 PM, Michael Barton  wrote:
>> Just a reminder.
>> 
>> GRASS 7.2RC2 does not run on the Mac.
>> 
>> Other versions, include recent 7.3 (I have not tried to compile since
>> September) do work fine. No errors compiling, but I get the error below when
>> I try to run it. Any advice would be helpful.
> 
> I've just compiled it on Mac and it ran just fine. Since the error
> comes from the addon toolboxes, what kind of addons do you have
> installed? I suggest to recompile and check if there are any errors in
> the compilation output.
> 
> Anna
> 
>> 
>> Michael
>> 
>> C. Michael Barton
>> Director, Center for Social Dynamics & Complexity
>> Professor of Anthropology, School of Human Evolution & Social Change
>> Head, Graduate Faculty in Complex Adaptive Systems Science
>> Arizona State University
>> 
>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>> www: 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.public.asu.edu_-7Ecmbarton=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=fG_nZiBNPANgQlxr45MZoW7b4hsq55ZBxX9iuPaePIo=
>>  , 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__csdc.asu.edu=DQIBaQ=AGbYxfJbXK67KfXyGqyv2Ejiz41FqQuZFk4A-1IxfAU=vxOW6PLS28MPea_dWUwPfRf71TAIziRDuFqWJimQN1I=5qA3mt0eYGlhGT5ZLNbHEc3zjLmnesbRw6j4spKp1oY=VxZo-g4_6S_iSUp9AKDAJPo7RvtgrHZ2s_mywOGLdsE=
>>  
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> On Nov 29, 2016, at 1:53 PM, Michael Barton  wrote:
>> 
>> Yesterday I compiled GRASS 7.2 RC2 with no errors. Today I tried to test it
>> before posting and got the following error:
>> 
>> GRASS 7.2.0RC2 (Global_latlon):~ > Traceback (most recent call last):
>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>> line 158, in 
>>sys.exit(main())
>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>> line 145, in main
>>app = GMApp(workspaceFile)
>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>> line 48, in __init__
>>wx.App.__init__(self, False)
>>  File
>> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
>> line 7981, in __init__
>>self._BootstrapApp()
>>  File
>> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
>> line 7555, in _BootstrapApp
>>return _core_.PyApp__BootstrapApp(*args, **kwargs)
>>  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
>> line 92, in OnInit
>>workspace=self.workspaceFile)
>>  File
>> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/frame.py",
>> line 129, in __init__
>>self._menuTreeBuilder = LayerManagerMenuData()
>>  File
>> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/menudata.py",
>> line 42, in __init__
>>self, filename, expandAddons=expandAddons)
>>  File
>> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/core/menutree.py",
>> line 65, in __init__
>>xmlTree = etree.parse(filename)
>>  File
>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>> line 1182, in parse
>>tree.parse(source, parser)
>>  File
>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>> line 657, in parse
>>self._root = parser.close()
>>  File
>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>> line 1654, in close
>>self._raiseerror(v)
>>  File
>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
>> line 1506, in _raiseerror
>>raise err
>> xml.etree.ElementTree.ParseError: no element found: line 1, column 0
>> 
>> Any idea what this is?
>> 
>> Michael
>> 
>> C. Michael Barton
>> Director, Center for Social Dynamics & Complexity
>> Professor of Anthropology, School of Human Evolution & Social Change
>> Head, Graduate Faculty in Complex Adaptive Systems Science
>> Arizona State University
>> 
>> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
>> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
>> www: 
>>

Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Martin Landa

Hi,

sorry, but is it reported as an issue on trac? It's hard to follow all
mails with all the strange subjects. Thanks, more over it looks like
an issue with the computer which you use for building. Some details
would be useful. I hope that my colleagues with Mac will help. Good
luck, Martin

2016-12-05 19:24 GMT+01:00 Michael Barton :
> Just a reminder.
>
> GRASS 7.2RC2 does not run on the Mac.
>
> Other versions, include recent 7.3 (I have not tried to compile since
> September) do work fine. No errors compiling, but I get the error below when
> I try to run it. Any advice would be helpful.
>
> Michael
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
> On Nov 29, 2016, at 1:53 PM, Michael Barton  wrote:
>
> Yesterday I compiled GRASS 7.2 RC2 with no errors. Today I tried to test it
> before posting and got the following error:
>
> GRASS 7.2.0RC2 (Global_latlon):~ > Traceback (most recent call last):
>   File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 158, in 
> sys.exit(main())
>   File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 145, in main
> app = GMApp(workspaceFile)
>   File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 48, in __init__
> wx.App.__init__(self, False)
>   File
> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
> line 7981, in __init__
> self._BootstrapApp()
>   File
> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
> line 7555, in _BootstrapApp
> return _core_.PyApp__BootstrapApp(*args, **kwargs)
>   File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 92, in OnInit
> workspace=self.workspaceFile)
>   File
> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/frame.py",
> line 129, in __init__
> self._menuTreeBuilder = LayerManagerMenuData()
>   File
> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/menudata.py",
> line 42, in __init__
> self, filename, expandAddons=expandAddons)
>   File
> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/core/menutree.py",
> line 65, in __init__
> xmlTree = etree.parse(filename)
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
> line 1182, in parse
> tree.parse(source, parser)
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
> line 657, in parse
> self._root = parser.close()
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
> line 1654, in close
> self._raiseerror(v)
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
> line 1506, in _raiseerror
> raise err
> xml.etree.ElementTree.ParseError: no element found: line 1, column 0
>
> Any idea what this is?
>
> Michael
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
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Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Anna Petrášová

On Mon, Dec 5, 2016 at 1:24 PM, Michael Barton  wrote:
> Just a reminder.
>
> GRASS 7.2RC2 does not run on the Mac.
>
> Other versions, include recent 7.3 (I have not tried to compile since
> September) do work fine. No errors compiling, but I get the error below when
> I try to run it. Any advice would be helpful.

I've just compiled it on Mac and it ran just fine. Since the error
comes from the addon toolboxes, what kind of addons do you have
installed? I suggest to recompile and check if there are any errors in
the compilation output.

Anna

>
> Michael
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
> On Nov 29, 2016, at 1:53 PM, Michael Barton  wrote:
>
> Yesterday I compiled GRASS 7.2 RC2 with no errors. Today I tried to test it
> before posting and got the following error:
>
> GRASS 7.2.0RC2 (Global_latlon):~ > Traceback (most recent call last):
>   File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 158, in 
> sys.exit(main())
>   File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 145, in main
> app = GMApp(workspaceFile)
>   File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 48, in __init__
> wx.App.__init__(self, False)
>   File
> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
> line 7981, in __init__
> self._BootstrapApp()
>   File
> "/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
> line 7555, in _BootstrapApp
> return _core_.PyApp__BootstrapApp(*args, **kwargs)
>   File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py",
> line 92, in OnInit
> workspace=self.workspaceFile)
>   File
> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/frame.py",
> line 129, in __init__
> self._menuTreeBuilder = LayerManagerMenuData()
>   File
> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/menudata.py",
> line 42, in __init__
> self, filename, expandAddons=expandAddons)
>   File
> "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/core/menutree.py",
> line 65, in __init__
> xmlTree = etree.parse(filename)
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
> line 1182, in parse
> tree.parse(source, parser)
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
> line 657, in parse
> self._root = parser.close()
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
> line 1654, in close
> self._raiseerror(v)
>   File
> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
> line 1506, in _raiseerror
> raise err
> xml.etree.ElementTree.ParseError: no element found: line 1, column 0
>
> Any idea what this is?
>
> Michael
> 
> C. Michael Barton
> Director, Center for Social Dynamics & Complexity
> Professor of Anthropology, School of Human Evolution & Social Change
> Head, Graduate Faculty in Complex Adaptive Systems Science
> Arizona State University
>
> voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
> fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
> www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
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Re: [GRASS-dev] GRASS 7.2RC2 blocker

2016-12-05 Thread Michael Barton

Just a reminder.

GRASS 7.2RC2 does not run on the Mac.

Other versions, include recent 7.3 (I have not tried to compile since 
September) do work fine. No errors compiling, but I get the error below when I 
try to run it. Any advice would be helpful.

Michael

C. Michael Barton
Director, Center for Social Dynamics & Complexity
Professor of Anthropology, School of Human Evolution & Social Change
Head, Graduate Faculty in Complex Adaptive Systems Science
Arizona State University

voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
www: http://www.public.asu.edu/~cmbarton, http://csdc.asu.edu















On Nov 29, 2016, at 1:53 PM, Michael Barton 
> wrote:

Yesterday I compiled GRASS 7.2 RC2 with no errors. Today I tried to test it 
before posting and got the following error:

GRASS 7.2.0RC2 (Global_latlon):~ > Traceback (most recent call last):
  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py", line 
158, in 
sys.exit(main())
  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py", line 
145, in main
app = GMApp(workspaceFile)
  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py", line 
48, in __init__
wx.App.__init__(self, False)
  File 
"/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
 line 7981, in __init__
self._BootstrapApp()
  File 
"/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.7/site-packages/wx-2.8-mac-unicode/wx/_core.py",
 line 7555, in _BootstrapApp
return _core_.PyApp__BootstrapApp(*args, **kwargs)
  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/wxgui.py", line 
92, in OnInit
workspace=self.workspaceFile)
  File "/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/frame.py", 
line 129, in __init__
self._menuTreeBuilder = LayerManagerMenuData()
  File 
"/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/lmgr/menudata.py", 
line 42, in __init__
self, filename, expandAddons=expandAddons)
  File 
"/Applications/GRASS-7.2.app/Contents/MacOS/gui/wxpython/core/menutree.py", 
line 65, in __init__
xmlTree = etree.parse(filename)
  File 
"/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
 line 1182, in parse
tree.parse(source, parser)
  File 
"/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
 line 657, in parse
self._root = parser.close()
  File 
"/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
 line 1654, in close
self._raiseerror(v)
  File 
"/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xml/etree/ElementTree.py",
 line 1506, in _raiseerror
raise err
xml.etree.ElementTree.ParseError: no element found: line 1, column 0

Any idea what this is?

Michael

C. Michael Barton
Director, Center for Social Dynamics & Complexity
Professor of Anthropology, School of Human Evolution & Social Change
Head, Graduate Faculty in Complex Adaptive Systems Science
Arizona State University

voice:  480-965-6262 (SHESC), 480-965-8130/727-9746 (CSDC)
fax: 480-965-7671 (SHESC),  480-727-0709 (CSDC)
www: http://www.public.asu.edu/~cmbarton, 
http://csdc.asu.edu
















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Re: [GRASS-dev] python port of r.denoise (testing required)

2016-12-05 Thread Markus Neteler

On Fri, Dec 2, 2016 at 4:22 PM, Carlos Grohmann
 wrote:
> Hello all.
>
> I just finished porting r.denoise to python, but before uploading it to the
> add-ons, I would welcome any testing.
>
> The module is available here:
> https://github.com/CarlosGrohmann/grass_gis/tree/master/r_denoise_py

Please add a Makefile as well.
In addition, you may consider to add the download and compilation of
the needed mdenoise to the Makefile.

Markus

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Re: [GRASS-dev] i.segment gives different results in G72 and G73

2016-12-05 Thread Martin Landa

Hi,

2016-12-05 15:00 GMT+01:00 Markus Metz :
> It's very technical and explains differences between versions. I am not sure
> if this should go into the user manual. The concept of region growing is the
> same.

probably could be useful at least to explain that different version of
GRASS can give different results... Ma

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Re: [GRASS-dev] i.segment gives different results in G72 and G73

2016-12-05 Thread Markus Metz

On Mon, Dec 5, 2016 at 1:36 PM, Martin Landa  wrote:
>
> Hi,
>
> 2016-12-05 8:54 GMT+01:00 Markus Metz :
>
> > Both versions use the same method by default. However, the G73 version
of
> > region growing in i.segment has been modified, it is now faster for
larger
> > objects (larger thresholds). A side effect is that objects might differ
> > slightly between G72 and G73, but both results are correct in terms of
the
> > concept of region growing. The reason for the difference is when
finding the
> > most similar neighbor region, there can be several equally best
neighbors.
> > Which one is selected is more or less chance, to be precise, the order
of
> > visiting the neighbors, and this order of visiting changed.
>
> thanks for clarification. Could be probably good idea to explain it
> also in manual pages. Can we take this paragraph as it is? Thanks,
> Martin

It's very technical and explains differences between versions. I am not
sure if this should go into the user manual. The concept of region growing
is the same.

Markus M
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Re: [GRASS-dev] i.segment gives different results in G72 and G73

2016-12-05 Thread Markus Metz

On Mon, Dec 5, 2016 at 1:46 PM, Martin Landa  wrote:
>
> Hi,
>
> 2016-12-05 9:09 GMT+01:00 Moritz Lennert :
> > What colleagues here have also noticed is that between the versions
(but I can't remember if it was 7.0 vs 7.3 or 7.2 vs 7.3) quite different
thresholds were needed to reach similar segmentation results. In 7.3
reasonable thresholds are often an order of magnitude lower, i.e. 0.001
instead of 0.01...
>
> this wasn't my case.

I am also getting very similar results with the same threshold. Can your
colleagues provide an example where such different thresholds need to be
used to obtain comparable results?

> I am getting slightly different results in G72
>
> i.segment complete. Number of segments created: 4367082
> (Sun Dec  4 09:42:19 2016) Command finished (3 min 36 sec)
>
> and G73
>
> i.segment complete. Number of segments created: 4359666
> (Mon Dec  5 13:45:41 2016) Command finished (4 min 44 sec)
>
> But not so much. Segmentation process is also a little bit slower in
> this case (and takes more iterations: 8->14). Ma

Strange. E.g. with ortho_2001_t792_1m from the NC dataset and a threshold
of 0.25, G72 needs 20 min 29 sec while G73 needs only 6 min 14 sec. The
speed gain of G73 is more prominent when there are large objects.

Markus M
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Re: [GRASS-dev] [release planning] 7.2.0

2016-12-05 Thread Martin Landa

Hi,

2016-12-05 9:33 GMT+01:00 Luca Delucchi :
> Yes I also think this, but I'm not sure if it is better to change the
> behavior of r.out.xyz or keep it like the actual one and change it in
> the next main release.
> For sure we should add parameter to permit to return also NULL values
> before the 7.2 release

I am not sure complicated it is and who will do it soon. We cannot
wait forever. There will be 7.2.1 quite soon (in three/four months).
Ma

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Re: [GRASS-dev] i.segment gives different results in G72 and G73

2016-12-05 Thread Martin Landa

Hi,

2016-12-05 9:09 GMT+01:00 Moritz Lennert :
> What colleagues here have also noticed is that between the versions (but I 
> can't remember if it was 7.0 vs 7.3 or 7.2 vs 7.3) quite different thresholds 
> were needed to reach similar segmentation results. In 7.3 reasonable 
> thresholds are often an order of magnitude lower, i.e. 0.001 instead of 
> 0.01...

this wasn't my case. I am getting slightly different results in G72

i.segment complete. Number of segments created: 4367082
(Sun Dec  4 09:42:19 2016) Command finished (3 min 36 sec)

and G73

i.segment complete. Number of segments created: 4359666
(Mon Dec  5 13:45:41 2016) Command finished (4 min 44 sec)

But not so much. Segmentation process is also a little bit slower in
this case (and takes more iterations: 8->14). Ma

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[GRASS-dev] Fwd: Re: i.segment gives different results in G72 and G73

2016-12-05 Thread Moritz Lennert

[Sent this from a wrong address, so sending this again for completeness.]

 Forwarded Message 
Subject: Re: [GRASS-dev] i.segment gives different results in G72 and G73
Date: Mon, 05 Dec 2016 09:09:48 +0100
To: Markus Metz , Martin Landa 

CC: GRASS developers list 

Le 5 décembre 2016 08:54:01 GMT+01:00, Markus Metz 
 a écrit :

On Sun, Dec 4, 2016 at 9:56 AM, Martin Landa 
wrote:

Running `i.segment` on the same data in G72 and G73 gives different
results. Both commands should use the same method - G72 supports only
'region growing', G73 has this method as default one.

Both versions use the same method by default. However, the G73 version
of
region growing in i.segment has been modified, it is now faster for
larger
objects (larger thresholds). A side effect is that objects might differ
slightly between G72 and G73, but both results are correct in terms of
the
concept of region growing. The reason for the difference is when
finding
the most similar neighbor region, there can be several equally best
neighbors. Which one is selected is more or less chance, to be precise,
the
order of visiting the neighbors, and this order of visiting changed.

What colleagues here have also noticed is that between the versions (but 
I can't remember if it was 7.0 vs 7.3 or 7.2 vs 7.3) quite different 
thresholds were needed to reach similar segmentation results. In 7.3 
reasonable thresholds are often an order of magnitude lower, i.e. 0.001 
instead of 0.01...

Moritz

Markus M

Region:

{{{
north:  -1057730
south:  -1058250
west:   -713860
east:   -712960
nsres:  0.25
ewres:  0.25
rows:   2080
cols:   3600
cells:  7488000
}}}

Command:

{{{
i.segment group=seg output=seg1 threshold=0.01 --o
}}}

G72:

{{{
...
Segmentation converged after 8 iterations
Writing out segment IDs...
i.segment complete. Number of segments created: 4367082
(Sun Dec  4 09:42:19 2016) Command finished (3 min 36 sec)
}}}

G73:

{{{
Segmentation converged after 14 iterations
Assigning region IDs to remaining single-cell regions...
Writing out segment IDs...
i.segment complete. Number of segments created: 4359666
}}}

Segmentation performed in G73 gives slightly different results and
takes longer time to finish.

Thanks for clarification in advance, Martin

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Re: [GRASS-dev] i.segment gives different results in G72 and G73

2016-12-05 Thread Martin Landa

Hi,

2016-12-05 8:54 GMT+01:00 Markus Metz :

> Both versions use the same method by default. However, the G73 version of
> region growing in i.segment has been modified, it is now faster for larger
> objects (larger thresholds). A side effect is that objects might differ
> slightly between G72 and G73, but both results are correct in terms of the
> concept of region growing. The reason for the difference is when finding the
> most similar neighbor region, there can be several equally best neighbors.
> Which one is selected is more or less chance, to be precise, the order of
> visiting the neighbors, and this order of visiting changed.

thanks for clarification. Could be probably good idea to explain it
also in manual pages. Can we take this paragraph as it is? Thanks,
Martin

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Re: [GRASS-dev] [release planning] 7.2.0

2016-12-05 Thread Luca Delucchi

On 5 December 2016 at 08:10, Markus Neteler  wrote:
>
> On Dec 3, 2016 6:00 PM, "Martin Landa"  wrote:
>>
>> Hi,
>>
>> it's one week GRASS 7.2.0RC2 has been released. It's time to think
>> about 7.2.0 final release. I don't see any blocker [1], if no
>> objection
>
> ... what about the NULL export in r.out.xyz? Currently it  looks like an
> anomaly.
>

Yes I also think this, but I'm not sure if it is better to change the
behavior of r.out.xyz or keep it like the actual one and change it in
the next main release.
For sure we should add parameter to permit to return also NULL values
before the 7.2 release

> Markus
>

-- 
ciao
Luca

www.lucadelu.org
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Re: [GRASS-dev] python port of r.denoise (testing required)

Re: [GRASS-dev] python port of r.denoise (testing required)

Re: [GRASS-dev] python port of r.denoise (testing required)

Re: [GRASS-dev] i.segment gives different results in G72 and G73

Re: [GRASS-dev] t.rast.out.xyz not exporting all cells in the computational region

Re: [GRASS-dev] i.segment gives different results in G72 and G73

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] python port of r.denoise (testing required)

Re: [GRASS-dev] python port of r.denoise (testing required)

Re: [GRASS-dev] i.segment gives different results in G72 and G73

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] GRASS 7.2RC2 blocker

Re: [GRASS-dev] python port of r.denoise (testing required)

Re: [GRASS-dev] i.segment gives different results in G72 and G73

Re: [GRASS-dev] i.segment gives different results in G72 and G73

Re: [GRASS-dev] i.segment gives different results in G72 and G73

Re: [GRASS-dev] [release planning] 7.2.0

Re: [GRASS-dev] i.segment gives different results in G72 and G73

[GRASS-dev] Fwd: Re: i.segment gives different results in G72 and G73

Re: [GRASS-dev] i.segment gives different results in G72 and G73

Re: [GRASS-dev] [release planning] 7.2.0

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