Re: [gmx-users] x,y,z components of forces on each atom

2016-08-30 Thread Justin Lemkul



On 8/30/16 8:32 AM, Markus Kaukonen wrote:

Dear All,
I tried to get forces acting on every atom (fx, fy, fz, not the total force
on atom).
Is this somehow possible with standard gromacs 2016?


Extract them from the .trr file with gmx traj -of.

-Justin

--
==

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalem...@outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

==
--
Gromacs Users mailing list

* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a 
mail to gmx-users-requ...@gromacs.org.


[gmx-users] x,y,z components of forces on each atom

2016-08-30 Thread Markus Kaukonen
Dear All,
I tried to get forces acting on every atom (fx, fy, fz, not the total force
on atom).
Is this somehow possible with standard gromacs 2016?
terveisin, Markus

-- 
--www=http://www.iki.fi/markus.kaukonen
--markus.kauko...@iki.fi
--office: www.helsinki.fi/kemia/svenskakemen/index_eng.html
--home: Viinirinne 3 F 12, 02630 Espoo, FIN
--tel: h 045-1242068
-- 
Gromacs Users mailing list

* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a 
mail to gmx-users-requ...@gromacs.org.