[jira] [Commented] (HBASE-25570) On largish cluster, "CleanerChore: Could not delete dir..." makes master log unreadable
[
https://issues.apache.org/jira/browse/HBASE-25570?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=17300743#comment-17300743
]
Hudson commented on HBASE-25570:
Results for branch master
[build #235 on
builds.a.o|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/master/235/]:
(x) *{color:red}-1 overall{color}*
details (if available):
(x) {color:red}-1 general checks{color}
-- For more information [see general
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/master/235/General_20Nightly_20Build_20Report/]
(x) {color:red}-1 jdk8 hadoop3 checks{color}
-- For more information [see jdk8 (hadoop3)
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/master/235/JDK8_20Nightly_20Build_20Report_20_28Hadoop3_29/]
(x) {color:red}-1 jdk11 hadoop3 checks{color}
-- For more information [see jdk11
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/master/235/JDK11_20Nightly_20Build_20Report_20_28Hadoop3_29/]
(/) {color:green}+1 source release artifact{color}
-- See build output for details.
(/) {color:green}+1 client integration test{color}
> On largish cluster, "CleanerChore: Could not delete dir..." makes master log
> unreadable
> ---
>
> Key: HBASE-25570
> URL: https://issues.apache.org/jira/browse/HBASE-25570
> Project: HBase
> Issue Type: Improvement
>Reporter: Michael Stack
>Assignee: Michael Stack
>Priority: Major
> Fix For: 3.0.0-alpha-1, 2.5.0, 2.4.2
>
>
> Looking at a running master on a largish cluster, the master log is full of
> spew to this effect:
> {{
> 2021-02-10 23:16:49,330 INFO [dir-scan-pool4-thread-206391]
> cleaner.CleanerChore: Could not delete dir under
> hdfs://web2-dfs:8020/hbase/archive/data/default/crawl_graph. might be
> transient; we'll retry. if it keeps happening, use following exception when
> asking on mailing list.
> org.apache.hadoop.ipc.RemoteException(org.apache.hadoop.fs.PathIsNotEmptyDirectoryException):
> `/hbase/archive/data/default/crawl_graph is non empty': Directory is not
> empty
> at
> org.apache.hadoop.hdfs.server.namenode.FSDirDeleteOp.delete(FSDirDeleteOp.java:116)
> at
> org.apache.hadoop.hdfs.server.namenode.FSNamesystem.delete(FSNamesystem.java:2962)
> at
> org.apache.hadoop.hdfs.server.namenode.NameNodeRpcServer.delete(NameNodeRpcServer.java:1092)
> at
> org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolServerSideTranslatorPB.delete(ClientNamenodeProtocolServerSideTranslatorPB.java:681)
> at
> org.apache.hadoop.hdfs.protocol.proto.ClientNamenodeProtocolProtos$ClientNamenodeProtocol$2.callBlockingMethod(ClientNamenodeProtocolProtos.java)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:523)
> at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:991)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:869)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:815)
> at java.security.AccessController.doPrivileged(Native Method)
> at javax.security.auth.Subject.doAs(Subject.java:422)
> at
> org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1875)
> at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2675)
> at org.apache.hadoop.ipc.Client.getRpcResponse(Client.java:1499)
> at org.apache.hadoop.ipc.Client.call(Client.java:1445)
> at org.apache.hadoop.ipc.Client.call(Client.java:1355)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:228)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:116)
> at com.sun.proxy.$Proxy19.delete(Unknown Source)
> at
> org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.delete(ClientNamenodeProtocolTranslatorPB.java:621)
> at sun.reflect.GeneratedMethodAccessor39.invoke(Unknown Source)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:422)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeMethod(RetryInvocationHandler.java:165)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invoke(RetryInvocationHandler.java:157)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeOnce(RetryInvocationHandler.java:95)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:359)
> at
[jira] [Commented] (HBASE-25570) On largish cluster, "CleanerChore: Could not delete dir..." makes master log unreadable
[
https://issues.apache.org/jira/browse/HBASE-25570?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=17300671#comment-17300671
]
Hudson commented on HBASE-25570:
Results for branch branch-2.4
[build #71 on
builds.a.o|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2.4/71/]:
(x) *{color:red}-1 overall{color}*
details (if available):
(x) {color:red}-1 general checks{color}
-- For more information [see general
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2.4/71/General_20Nightly_20Build_20Report/]
(x) {color:red}-1 jdk8 hadoop2 checks{color}
-- For more information [see jdk8 (hadoop2)
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2.4/71/JDK8_20Nightly_20Build_20Report_20_28Hadoop2_29/]
(x) {color:red}-1 jdk8 hadoop3 checks{color}
-- For more information [see jdk8 (hadoop3)
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2.4/71/JDK8_20Nightly_20Build_20Report_20_28Hadoop3_29/]
(x) {color:red}-1 jdk11 hadoop3 checks{color}
-- For more information [see jdk11
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2.4/71/JDK11_20Nightly_20Build_20Report_20_28Hadoop3_29/]
(/) {color:green}+1 source release artifact{color}
-- See build output for details.
(/) {color:green}+1 client integration test{color}
> On largish cluster, "CleanerChore: Could not delete dir..." makes master log
> unreadable
> ---
>
> Key: HBASE-25570
> URL: https://issues.apache.org/jira/browse/HBASE-25570
> Project: HBase
> Issue Type: Improvement
>Reporter: Michael Stack
>Assignee: Michael Stack
>Priority: Major
> Fix For: 3.0.0-alpha-1, 2.5.0, 2.4.2
>
>
> Looking at a running master on a largish cluster, the master log is full of
> spew to this effect:
> {{
> 2021-02-10 23:16:49,330 INFO [dir-scan-pool4-thread-206391]
> cleaner.CleanerChore: Could not delete dir under
> hdfs://web2-dfs:8020/hbase/archive/data/default/crawl_graph. might be
> transient; we'll retry. if it keeps happening, use following exception when
> asking on mailing list.
> org.apache.hadoop.ipc.RemoteException(org.apache.hadoop.fs.PathIsNotEmptyDirectoryException):
> `/hbase/archive/data/default/crawl_graph is non empty': Directory is not
> empty
> at
> org.apache.hadoop.hdfs.server.namenode.FSDirDeleteOp.delete(FSDirDeleteOp.java:116)
> at
> org.apache.hadoop.hdfs.server.namenode.FSNamesystem.delete(FSNamesystem.java:2962)
> at
> org.apache.hadoop.hdfs.server.namenode.NameNodeRpcServer.delete(NameNodeRpcServer.java:1092)
> at
> org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolServerSideTranslatorPB.delete(ClientNamenodeProtocolServerSideTranslatorPB.java:681)
> at
> org.apache.hadoop.hdfs.protocol.proto.ClientNamenodeProtocolProtos$ClientNamenodeProtocol$2.callBlockingMethod(ClientNamenodeProtocolProtos.java)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:523)
> at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:991)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:869)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:815)
> at java.security.AccessController.doPrivileged(Native Method)
> at javax.security.auth.Subject.doAs(Subject.java:422)
> at
> org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1875)
> at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2675)
> at org.apache.hadoop.ipc.Client.getRpcResponse(Client.java:1499)
> at org.apache.hadoop.ipc.Client.call(Client.java:1445)
> at org.apache.hadoop.ipc.Client.call(Client.java:1355)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:228)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:116)
> at com.sun.proxy.$Proxy19.delete(Unknown Source)
> at
> org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.delete(ClientNamenodeProtocolTranslatorPB.java:621)
> at sun.reflect.GeneratedMethodAccessor39.invoke(Unknown Source)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:422)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeMethod(RetryInvocationHandler.java:165)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invoke(RetryInvocationHandler.java:157)
> at
>
[jira] [Commented] (HBASE-25570) On largish cluster, "CleanerChore: Could not delete dir..." makes master log unreadable
[
https://issues.apache.org/jira/browse/HBASE-25570?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=17300491#comment-17300491
]
Hudson commented on HBASE-25570:
Results for branch branch-2
[build #199 on
builds.a.o|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2/199/]:
(x) *{color:red}-1 overall{color}*
details (if available):
(x) {color:red}-1 general checks{color}
-- For more information [see general
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2/199/General_20Nightly_20Build_20Report/]
(x) {color:red}-1 jdk8 hadoop2 checks{color}
-- For more information [see jdk8 (hadoop2)
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2/199/JDK8_20Nightly_20Build_20Report_20_28Hadoop2_29/]
(x) {color:red}-1 jdk8 hadoop3 checks{color}
-- For more information [see jdk8 (hadoop3)
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2/199/JDK8_20Nightly_20Build_20Report_20_28Hadoop3_29/]
(x) {color:red}-1 jdk11 hadoop3 checks{color}
-- For more information [see jdk11
report|https://ci-hadoop.apache.org/job/HBase/job/HBase%20Nightly/job/branch-2/199/JDK11_20Nightly_20Build_20Report_20_28Hadoop3_29/]
(/) {color:green}+1 source release artifact{color}
-- See build output for details.
(/) {color:green}+1 client integration test{color}
> On largish cluster, "CleanerChore: Could not delete dir..." makes master log
> unreadable
> ---
>
> Key: HBASE-25570
> URL: https://issues.apache.org/jira/browse/HBASE-25570
> Project: HBase
> Issue Type: Improvement
>Reporter: Michael Stack
>Assignee: Michael Stack
>Priority: Major
> Fix For: 3.0.0-alpha-1, 2.5.0, 2.4.2
>
>
> Looking at a running master on a largish cluster, the master log is full of
> spew to this effect:
> {{
> 2021-02-10 23:16:49,330 INFO [dir-scan-pool4-thread-206391]
> cleaner.CleanerChore: Could not delete dir under
> hdfs://web2-dfs:8020/hbase/archive/data/default/crawl_graph. might be
> transient; we'll retry. if it keeps happening, use following exception when
> asking on mailing list.
> org.apache.hadoop.ipc.RemoteException(org.apache.hadoop.fs.PathIsNotEmptyDirectoryException):
> `/hbase/archive/data/default/crawl_graph is non empty': Directory is not
> empty
> at
> org.apache.hadoop.hdfs.server.namenode.FSDirDeleteOp.delete(FSDirDeleteOp.java:116)
> at
> org.apache.hadoop.hdfs.server.namenode.FSNamesystem.delete(FSNamesystem.java:2962)
> at
> org.apache.hadoop.hdfs.server.namenode.NameNodeRpcServer.delete(NameNodeRpcServer.java:1092)
> at
> org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolServerSideTranslatorPB.delete(ClientNamenodeProtocolServerSideTranslatorPB.java:681)
> at
> org.apache.hadoop.hdfs.protocol.proto.ClientNamenodeProtocolProtos$ClientNamenodeProtocol$2.callBlockingMethod(ClientNamenodeProtocolProtos.java)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:523)
> at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:991)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:869)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:815)
> at java.security.AccessController.doPrivileged(Native Method)
> at javax.security.auth.Subject.doAs(Subject.java:422)
> at
> org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1875)
> at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2675)
> at org.apache.hadoop.ipc.Client.getRpcResponse(Client.java:1499)
> at org.apache.hadoop.ipc.Client.call(Client.java:1445)
> at org.apache.hadoop.ipc.Client.call(Client.java:1355)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:228)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:116)
> at com.sun.proxy.$Proxy19.delete(Unknown Source)
> at
> org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.delete(ClientNamenodeProtocolTranslatorPB.java:621)
> at sun.reflect.GeneratedMethodAccessor39.invoke(Unknown Source)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:422)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeMethod(RetryInvocationHandler.java:165)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invoke(RetryInvocationHandler.java:157)
> at
>
[jira] [Commented] (HBASE-25570) On largish cluster, "CleanerChore: Could not delete dir..." makes master log unreadable
[
https://issues.apache.org/jira/browse/HBASE-25570?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=17283815#comment-17283815
]
Michael Stack commented on HBASE-25570:
---
The change came in here:
{{
commit 4268774de16d7a25da9446a05055bdf3d648766e
Author: openinx
Date: Thu Aug 22 19:42:01 2019 +0800
HBASE-22867 The ForkJoinPool in CleanerChore will spawn thousands of
threads in our cluster with thousands table (#513)
Signed-off-by: Duo Zhang
Signed-off-by: Reid Chan }}
Its a good change. It just needs a bit of tuning up.
> On largish cluster, "CleanerChore: Could not delete dir..." makes master log
> unreadable
> ---
>
> Key: HBASE-25570
> URL: https://issues.apache.org/jira/browse/HBASE-25570
> Project: HBase
> Issue Type: Improvement
>Reporter: Michael Stack
>Priority: Major
>
> Looking at a running master on a largish cluster, the master log is full of
> spew to this effect:
> {{
> 2021-02-10 23:16:49,330 INFO [dir-scan-pool4-thread-206391]
> cleaner.CleanerChore: Could not delete dir under
> hdfs://web2-dfs:8020/hbase/archive/data/default/crawl_graph. might be
> transient; we'll retry. if it keeps happening, use following exception when
> asking on mailing list.
> org.apache.hadoop.ipc.RemoteException(org.apache.hadoop.fs.PathIsNotEmptyDirectoryException):
> `/hbase/archive/data/default/crawl_graph is non empty': Directory is not
> empty
> at
> org.apache.hadoop.hdfs.server.namenode.FSDirDeleteOp.delete(FSDirDeleteOp.java:116)
> at
> org.apache.hadoop.hdfs.server.namenode.FSNamesystem.delete(FSNamesystem.java:2962)
> at
> org.apache.hadoop.hdfs.server.namenode.NameNodeRpcServer.delete(NameNodeRpcServer.java:1092)
> at
> org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolServerSideTranslatorPB.delete(ClientNamenodeProtocolServerSideTranslatorPB.java:681)
> at
> org.apache.hadoop.hdfs.protocol.proto.ClientNamenodeProtocolProtos$ClientNamenodeProtocol$2.callBlockingMethod(ClientNamenodeProtocolProtos.java)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:523)
> at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:991)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:869)
> at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:815)
> at java.security.AccessController.doPrivileged(Native Method)
> at javax.security.auth.Subject.doAs(Subject.java:422)
> at
> org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1875)
> at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2675)
> at org.apache.hadoop.ipc.Client.getRpcResponse(Client.java:1499)
> at org.apache.hadoop.ipc.Client.call(Client.java:1445)
> at org.apache.hadoop.ipc.Client.call(Client.java:1355)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:228)
> at
> org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:116)
> at com.sun.proxy.$Proxy19.delete(Unknown Source)
> at
> org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.delete(ClientNamenodeProtocolTranslatorPB.java:621)
> at sun.reflect.GeneratedMethodAccessor39.invoke(Unknown Source)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:422)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeMethod(RetryInvocationHandler.java:165)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invoke(RetryInvocationHandler.java:157)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeOnce(RetryInvocationHandler.java:95)
> at
> org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:359)
> at com.sun.proxy.$Proxy20.delete(Unknown Source)
> at sun.reflect.GeneratedMethodAccessor39.invoke(Unknown Source)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at
> org.apache.hadoop.hbase.fs.HFileSystem$1.invoke(HFileSystem.java:372)
> at com.sun.proxy.$Proxy21.delete(Unknown Source)
> at sun.reflect.GeneratedMethodAccessor39.invoke(Unknown Source)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at
>
