Re: [kepler-users] Ontology

2013-03-03 Thread Edward A. Lee


There is also an ontology mechanism in Ptolemy II, which unlike the 
Kepler one, emphasizes inference across models. It is an extension of 
the type system...


Appendix E of the forthcoming Ptolemy book describes this...

You can find a draft of this book here:

   http://ptolemy.org/~eal/tmp/PtolemyII_DigitalV0_09.pdf

Edward

On 3/1/13 2:35 AM, Chalk, Stuart wrote:

I am working on a proposal to develop an open source electronic laboratory 
notebook and I am interested in knowing if Kepler has a formal ontology that 
describes the relationships between the different components in a workflow.  If 
so, where can I download a copy?

Any information greatly appreciated.

Stuart Chalk, Associate Professor Chemistry, University of North Florida

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[kepler-users] Ontology

2013-03-01 Thread Chalk, Stuart
I am working on a proposal to develop an open source electronic laboratory 
notebook and I am interested in knowing if Kepler has a formal ontology that 
describes the relationships between the different components in a workflow.  If 
so, where can I download a copy?

Any information greatly appreciated.

Stuart Chalk, Associate Professor Chemistry, University of North Florida

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Re: [kepler-users] Ontology

2013-03-01 Thread Jianwu Wang

Hi Stuart,

Kepler uses OWL ontology language to describe relationships between 
actors/components for the actor library. The owl files can be found in 
your local kepler installation 
($Kepler/common-*.*/configs/ptolemy/configs/kepler/ontologies/) or web 
(https://code.kepler-project.org/code/kepler/trunk/modules/common/configs/ptolemy/configs/kepler/ontologies/).


I'm not sure what do you mean by relationships between the 
different components in a workflow. Do you mean the dependencies 
between actors within a workflow? If so, I don't think we have ontology 
descriptions for it since the workflow xml specification is already enough.


Best wishes

Sincerely yours

Jianwu Wang, Ph.D.
jia...@sdsc.edu
http://users.sdsc.edu/~jianwu/

Assistant Project Scientist
Scientific Workflow Automation Technologies (SWAT) Laboratory
San Diego Supercomputer Center
University of California, San Diego
San Diego, CA, U.S.A.

On 3/1/13 2:35 AM, Chalk, Stuart wrote:

I am working on a proposal to develop an open source electronic laboratory 
notebook and I am interested in knowing if Kepler has a formal ontology that 
describes the relationships between the different components in a workflow.  If 
so, where can I download a copy?

Any information greatly appreciated.

Stuart Chalk, Associate Professor Chemistry, University of North Florida

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