Re: can't finish update: dpkg hangs installing xulrunner
I tried removing xulrunner and that worked, so this is no longer an issue. Thanks for your help! On 05/08/2011 09:50 PM, guy keren wrote: try to look back at the file, and see if this futex (0xb775e890) was acquired earlier in the strace output, and not released. these futexes are used to implement pthread mutexes, and if a an application attempts to lock the same mutex twice - it will deadlock - and you'll see it blocked on the underlying futex. note: it's also possible that this futex call is used to implement a different synchronization mechanism, which is persistent, and if an application crashed while it held this lock - it could lead to a similar deadlock. note also that the PID of the process stuck on this futex is 10227, while the PID of the original dpkg process is 10208 - so dpkg launched a process which got stuck. looking back at the strace log file - you could find what command this process executes. --guy On Sun, 2011-05-08 at 21:31 -0700, Michael Shiloh wrote: On 05/08/2011 08:10 PM, guy keren wrote: On Sun, 2011-05-08 at 17:04 -0700, Michael Shiloh wrote: apt-get update hangs at Setting up xulrunner-1.9.1 I can kill this, but then I can't finish the update because it says that dpkg was interrupted. Trying to let dpkg repair with sudo dpkg --configure -a hangs setting up xulrunner so I'm stuck. Any ideas? what does strace tell you? i.e. run the program under 'strace -f -o /tmp/somefile.txt dpkg ...' and when it hangs - look in the file /tmp/somefile.txt, and see what is it waiting for. Good idea. I'm not quite sure how to understand the results. The file starts with: 10208 execve(/usr/bin/dpkg, [dpkg, --configure, -a], [/* 20 vars */]) = 0 and ends with: 10227 set_robust_list(0xb775e900, 0xc) = 0 10227 futex(0xbfd66510, FUTEX_WAKE_PRIVATE, 1) = 0 10227 futex(0xbfd66510, FUTEX_WAIT_BITSET_PRIVATE|FUTEX_CLOCK_REALTIME, 1, NULL, bfd66520) = -1 EAGAIN (Resource temporarily unavailable) 10227 rt_sigaction(SIGRTMIN, {0x3196e0, [], SA_SIGINFO}, NULL, 8) = 0 10227 rt_sigaction(SIGRT_1, {0x319760, [], SA_RESTART|SA_SIGINFO}, NULL, 8) = 0 10227 rt_sigprocmask(SIG_UNBLOCK, [RTMIN RT_1], NULL, 8) = 0 10227 getrlimit(RLIMIT_STACK, {rlim_cur=8192*1024, rlim_max=RLIM_INFINITY}) = 0 10227 uname({sys=Linux, node=t60, ...}) = 0 10227 statfs64(/selinux, 84, {f_type=EXT2_SUPER_MAGIC, f_bsize=4096, f_blocks=27662569, f_bfree=5190843, f_bavail=3785658, f_files=14057472, f_ffree=13425663, f_fsid={-1774502679, 1875976236}, f_namelen=255, f_frsize=4096}) = 0 10227 open(/proc/cpuinfo, O_RDONLY) = 3 10227 read(3, processor\t: 0\nvendor_id\t: Genuin..., 1024) = 1024 10227 read(3, no\nfpu\t\t: yes\nfpu_exception\t: y..., 1024) = 382 10227 read(3, , 1024) = 0 10227 close(3) = 0 10227 readlink(/etc/malloc.conf, 0xbfd64fab, 4096) = -1 ENOENT (No such file or directory) 10227 mmap2(NULL, 1048576, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb765d000 10227 futex(0xb775e890, FUTEX_WAIT_PRIVATE, 2, NULL and that's the last line. It's been stucke there for awhile and no new lines are added to the file, so it looks like that futex is what's blocking. But why and what that means I don't know. What do you think? ___ Linux-il mailing list Linux-il@cs.huji.ac.il http://mailman.cs.huji.ac.il/mailman/listinfo/linux-il
can't finish update: dpkg hangs installing xulrunner
apt-get update hangs at Setting up xulrunner-1.9.1 I can kill this, but then I can't finish the update because it says that dpkg was interrupted. Trying to let dpkg repair with sudo dpkg --configure -a hangs setting up xulrunner so I'm stuck. Any ideas? -- Michael Shiloh KA6RCQ www.teachmetomake.com teachmetomake.wordpress.com Interested in classes? Join http://groups.google.com/group/teach-me-to-make ___ Linux-il mailing list Linux-il@cs.huji.ac.il http://mailman.cs.huji.ac.il/mailman/listinfo/linux-il
Re: can't finish update: dpkg hangs installing xulrunner
On Sun, 2011-05-08 at 17:04 -0700, Michael Shiloh wrote: apt-get update hangs at Setting up xulrunner-1.9.1 I can kill this, but then I can't finish the update because it says that dpkg was interrupted. Trying to let dpkg repair with sudo dpkg --configure -a hangs setting up xulrunner so I'm stuck. Any ideas? what does strace tell you? i.e. run the program under 'strace -f -o /tmp/somefile.txt dpkg ...' and when it hangs - look in the file /tmp/somefile.txt, and see what is it waiting for. --guy ___ Linux-il mailing list Linux-il@cs.huji.ac.il http://mailman.cs.huji.ac.il/mailman/listinfo/linux-il
Re: can't finish update: dpkg hangs installing xulrunner
On 05/08/2011 08:10 PM, guy keren wrote: On Sun, 2011-05-08 at 17:04 -0700, Michael Shiloh wrote: apt-get update hangs at Setting up xulrunner-1.9.1 I can kill this, but then I can't finish the update because it says that dpkg was interrupted. Trying to let dpkg repair with sudo dpkg --configure -a hangs setting up xulrunner so I'm stuck. Any ideas? what does strace tell you? i.e. run the program under 'strace -f -o /tmp/somefile.txt dpkg ...' and when it hangs - look in the file /tmp/somefile.txt, and see what is it waiting for. Good idea. I'm not quite sure how to understand the results. The file starts with: 10208 execve(/usr/bin/dpkg, [dpkg, --configure, -a], [/* 20 vars */]) = 0 and ends with: 10227 set_robust_list(0xb775e900, 0xc) = 0 10227 futex(0xbfd66510, FUTEX_WAKE_PRIVATE, 1) = 0 10227 futex(0xbfd66510, FUTEX_WAIT_BITSET_PRIVATE|FUTEX_CLOCK_REALTIME, 1, NULL, bfd66520) = -1 EAGAIN (Resource temporarily unavailable) 10227 rt_sigaction(SIGRTMIN, {0x3196e0, [], SA_SIGINFO}, NULL, 8) = 0 10227 rt_sigaction(SIGRT_1, {0x319760, [], SA_RESTART|SA_SIGINFO}, NULL, 8) = 0 10227 rt_sigprocmask(SIG_UNBLOCK, [RTMIN RT_1], NULL, 8) = 0 10227 getrlimit(RLIMIT_STACK, {rlim_cur=8192*1024, rlim_max=RLIM_INFINITY}) = 0 10227 uname({sys=Linux, node=t60, ...}) = 0 10227 statfs64(/selinux, 84, {f_type=EXT2_SUPER_MAGIC, f_bsize=4096, f_blocks=27662569, f_bfree=5190843, f_bavail=3785658, f_files=14057472, f_ffree=13425663, f_fsid={-1774502679, 1875976236}, f_namelen=255, f_frsize=4096}) = 0 10227 open(/proc/cpuinfo, O_RDONLY) = 3 10227 read(3, processor\t: 0\nvendor_id\t: Genuin..., 1024) = 1024 10227 read(3, no\nfpu\t\t: yes\nfpu_exception\t: y..., 1024) = 382 10227 read(3, , 1024) = 0 10227 close(3) = 0 10227 readlink(/etc/malloc.conf, 0xbfd64fab, 4096) = -1 ENOENT (No such file or directory) 10227 mmap2(NULL, 1048576, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb765d000 10227 futex(0xb775e890, FUTEX_WAIT_PRIVATE, 2, NULL and that's the last line. It's been stucke there for awhile and no new lines are added to the file, so it looks like that futex is what's blocking. But why and what that means I don't know. What do you think? ___ Linux-il mailing list Linux-il@cs.huji.ac.il http://mailman.cs.huji.ac.il/mailman/listinfo/linux-il
Re: can't finish update: dpkg hangs installing xulrunner
try to look back at the file, and see if this futex (0xb775e890) was acquired earlier in the strace output, and not released. these futexes are used to implement pthread mutexes, and if a an application attempts to lock the same mutex twice - it will deadlock - and you'll see it blocked on the underlying futex. note: it's also possible that this futex call is used to implement a different synchronization mechanism, which is persistent, and if an application crashed while it held this lock - it could lead to a similar deadlock. note also that the PID of the process stuck on this futex is 10227, while the PID of the original dpkg process is 10208 - so dpkg launched a process which got stuck. looking back at the strace log file - you could find what command this process executes. --guy On Sun, 2011-05-08 at 21:31 -0700, Michael Shiloh wrote: On 05/08/2011 08:10 PM, guy keren wrote: On Sun, 2011-05-08 at 17:04 -0700, Michael Shiloh wrote: apt-get update hangs at Setting up xulrunner-1.9.1 I can kill this, but then I can't finish the update because it says that dpkg was interrupted. Trying to let dpkg repair with sudo dpkg --configure -a hangs setting up xulrunner so I'm stuck. Any ideas? what does strace tell you? i.e. run the program under 'strace -f -o /tmp/somefile.txt dpkg ...' and when it hangs - look in the file /tmp/somefile.txt, and see what is it waiting for. Good idea. I'm not quite sure how to understand the results. The file starts with: 10208 execve(/usr/bin/dpkg, [dpkg, --configure, -a], [/* 20 vars */]) = 0 and ends with: 10227 set_robust_list(0xb775e900, 0xc) = 0 10227 futex(0xbfd66510, FUTEX_WAKE_PRIVATE, 1) = 0 10227 futex(0xbfd66510, FUTEX_WAIT_BITSET_PRIVATE|FUTEX_CLOCK_REALTIME, 1, NULL, bfd66520) = -1 EAGAIN (Resource temporarily unavailable) 10227 rt_sigaction(SIGRTMIN, {0x3196e0, [], SA_SIGINFO}, NULL, 8) = 0 10227 rt_sigaction(SIGRT_1, {0x319760, [], SA_RESTART|SA_SIGINFO}, NULL, 8) = 0 10227 rt_sigprocmask(SIG_UNBLOCK, [RTMIN RT_1], NULL, 8) = 0 10227 getrlimit(RLIMIT_STACK, {rlim_cur=8192*1024, rlim_max=RLIM_INFINITY}) = 0 10227 uname({sys=Linux, node=t60, ...}) = 0 10227 statfs64(/selinux, 84, {f_type=EXT2_SUPER_MAGIC, f_bsize=4096, f_blocks=27662569, f_bfree=5190843, f_bavail=3785658, f_files=14057472, f_ffree=13425663, f_fsid={-1774502679, 1875976236}, f_namelen=255, f_frsize=4096}) = 0 10227 open(/proc/cpuinfo, O_RDONLY) = 3 10227 read(3, processor\t: 0\nvendor_id\t: Genuin..., 1024) = 1024 10227 read(3, no\nfpu\t\t: yes\nfpu_exception\t: y..., 1024) = 382 10227 read(3, , 1024) = 0 10227 close(3) = 0 10227 readlink(/etc/malloc.conf, 0xbfd64fab, 4096) = -1 ENOENT (No such file or directory) 10227 mmap2(NULL, 1048576, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb765d000 10227 futex(0xb775e890, FUTEX_WAIT_PRIVATE, 2, NULL and that's the last line. It's been stucke there for awhile and no new lines are added to the file, so it looks like that futex is what's blocking. But why and what that means I don't know. What do you think? ___ Linux-il mailing list Linux-il@cs.huji.ac.il http://mailman.cs.huji.ac.il/mailman/listinfo/linux-il