Re: JabRef entry warning

2021-10-13 Thread Dr Eberhard Lisse

Paul,

this is why I am getting irritated at the (ie his) persistent lack of
sending in MWEs.  Having to go through this (and every time) borders on
the rude, and frustrates people like you (and me) who want to help.

A small file such as your dummy file, producing the error with the
required files allows anyone to just run the sucker and see where the
issue comes from.  Then one can also open the BIB file with another tool
(I like BibDesk on the Mac) and see what errors this flags.

I also find, when I have such an issue myself, reducing the file to
nothing else but the error producing text often makes me find the error
:-)-O

Never mind (him) sending in stuff with typos.

el

 12/10/2021 20:56, Paul A. Rubin wrote:
[...]

I turned your entry into a .bib file, cited it in a dummy document,
and compiled with biblatex.  It specifically flagged the first entry
that ended with a comma.  I think the "name" in the error message is
because it thinks that, after that last comma, there will be another
name = value pair in the field that it never finds (due to the closing
brace).  Not the ideal error message in my opinion, but deleting the
surplus comma did fix it.

I spotted the "and and" Maria flagged, but in my test that did not
cause an error message, it just mucked up the printed citation.

[...]

--
To email me replace 'nospam' with 'el'

--
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


Re: JabRef entry warning

2021-10-12 Thread Paul A. Rubin

On 10/12/21 2:31 PM, Rich Shepard wrote:

On Tue, 12 Oct 2021, Paul A. Rubin wrote:


You have commas at the end of several fields (inside the closing curly
brace), including institution, which I think is triggering the error
message.


Paul,

All key:value pairs end with commas except for the last one.

You also have a few places with a funky dash separating a pair of 
numbers,
rather than a double dash ('--'). That might be the result of copying 
from

a PDF and pasting. I don't know if that will also cause any indigestion.


Yes, that's not uncommon. I try to catch and repair them when I enter the
document in JabRef, but aren't always successful. Now corrected.

The error specified the document name, not any key:value pair between the
opening and closing braces:
WARN - Name in key 'Paul2012' is empty (probably consecutive 'and'):
skipping entry 'Paul2012'

The name key has no 'and' in it.

While this is a warning, not an error, I'd still like to have biber 
accept

it as correct.

Still puzzled,

Rich

I turned your entry into a .bib file, cited it in a dummy document, and 
compiled with biblatex. It specifically flagged the first entry that 
ended with a comma. I think the "name" in the error message is because 
it thinks that, after that last comma, there will be another name = 
value pair in the field that it never finds (due to the closing brace). 
Not the ideal error message in my opinion, but deleting the surplus 
comma did fix it.


I spotted the "and and" Maria flagged, but in my test that did not cause 
an error message, it just mucked up the printed citation.


--
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


Re: JabRef entry warning

2021-10-12 Thread Rich Shepard

On Tue, 12 Oct 2021, Maria Gouskova wrote:


Maybe it was the two "ands" in a row in the author field:


Maria,

Yep, that's the problem. It's like the reading test where the paragraph has
the word 'the' twice, once at the end of a line, the other at the beginning
of the following line.

I hadn't noticed that when I looked at each field, but your fresh eyes
caught it. Thank you very much.

Stay well,

Rich
--
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


Re: JabRef entry warning

2021-10-12 Thread Rich Shepard

On Tue, 12 Oct 2021, Paul A. Rubin wrote:


You have commas at the end of several fields (inside the closing curly
brace), including institution, which I think is triggering the error
message.


Paul,

All key:value pairs end with commas except for the last one.


You also have a few places with a funky dash separating a pair of numbers,
rather than a double dash ('--'). That might be the result of copying from
a PDF and pasting. I don't know if that will also cause any indigestion.


Yes, that's not uncommon. I try to catch and repair them when I enter the
document in JabRef, but aren't always successful. Now corrected.

The error specified the document name, not any key:value pair between the
opening and closing braces:
WARN - Name in key 'Paul2012' is empty (probably consecutive 'and'):
skipping entry 'Paul2012'

The name key has no 'and' in it.

While this is a warning, not an error, I'd still like to have biber accept
it as correct.

Still puzzled,

Rich

--
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


Re: JabRef entry warning

2021-10-12 Thread Maria Gouskova
On Tue, Oct 12, 2021 at 2:01 PM Paul A. Rubin  wrote:

> On 10/12/21 1:21 PM, Rich Shepard wrote:
> > On Tue, 12 Oct 2021, Paul A. Rubin wrote:
> >
> >> You mention 'Paul2012' in the warning but show the entry with key
> >> 'Paul2017'. Is one of those a typo, or did you show us the wrong entry?
> >
> > Paul2021,
> >
> > :-)
> >
> > Probably need to re-caffinate. Corrected entry just posted.
> >
> > Thanks,
> >
> > Rich
> Rich,
>
> You have commas at the end of several fields (inside the closing curly
> brace), including institution, which I think is triggering the error
> message.
>
> You also have a few places with a funky dash separating a pair of
> numbers, rather than a double dash ('--'). That might be the result of
> copying from a PDF and pasting. I don't know if that will also cause any
> indigestion.
>
> Paul
>
> --
> lyx-users mailing list
> lyx-users@lists.lyx.org
> http://lists.lyx.org/mailman/listinfo/lyx-users


Maybe it was the two "ands" in a row in the author field:

author = {Paul, A.P. and Paretti, N.V. and MacCoy, D.E. *and and* Brasher,
A.M.D.},
-- 
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


Re: JabRef entry warning

2021-10-12 Thread Paul A. Rubin

On 10/12/21 1:21 PM, Rich Shepard wrote:

On Tue, 12 Oct 2021, Paul A. Rubin wrote:

You mention 'Paul2012' in the warning but show the entry with key 
'Paul2017'. Is one of those a typo, or did you show us the wrong entry?


Paul2021,

:-)

Probably need to re-caffinate. Corrected entry just posted.

Thanks,

Rich

Rich,

You have commas at the end of several fields (inside the closing curly 
brace), including institution, which I think is triggering the error 
message.


You also have a few places with a funky dash separating a pair of 
numbers, rather than a double dash ('--'). That might be the result of 
copying from a PDF and pasting. I don't know if that will also cause any 
indigestion.


Paul

--
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


Re: JabRef entry warning

2021-10-12 Thread Rich Shepard

On Tue, 12 Oct 2021, Paul A. Rubin wrote:

You mention 'Paul2012' in the warning but show the entry with key 'Paul2017'. 
Is one of those a typo, or did you show us the wrong entry?


Paul2021,

:-)

Probably need to re-caffinate. Corrected entry just posted.

Thanks,

Rich
--
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


Re: JabRef entry warning

2021-10-12 Thread Rich Shepard

On Tue, 12 Oct 2021, Kornel Benko wrote:


Warning from 'Paul2012', but you cite 'Paul2017' here.


Kornel,

Mea culpa! The proper entry is:
@techreport{Paul2012,
abstract = {As part of the National Water-Quality Assessment Program of 
the U.S.
Geological Survey, this study examines the occurrence of nine trace
elements in bed sediment of varying mineralogy and land use and assesses
the possible effects of these trace elements on 
aquatic-macroinvertebrate
community structure. Samples of bed sediment and macroinvertebrates
were collected from 154 streams at sites representative of undeveloped,
...
and Naididae all demonstrated resilience to trace-element exposure
and, in some cases, possible changes in physical habitat within stream
ecosystems. The taxa characteristics within the Ozark Highland ecoregion
were different than other ecoregions as evidenced by generally more
diverse mayfly populations. In addition, Baetis sp. was common and
dominated many of the mayfly populations found in the Rocky Mountain
streams within the Mountain Southern Rockies and Mountain Northern
Rockies ecoregions; however, within the Ozark Highland ecoregion,
Tricorythodes sp. appeared to be more common than Baetis sp.},
author = {Paul, A.P. and Paretti, N.V. and MacCoy, D.E. and and 
Brasher, A.M.D.},
institution = {U.S. Geological Survey Scientific Investigations Report 
2012–5272,},
keywords = {streams, rivers, benthos, macroinvertebrates, sediments, 
land use, trace elements, statistics, metals},
number = {Scientific Investigations Report 2012–5272,},
title = {{The occurrence of trace elements in bed sediment collected 
from areas of varying land use and potential effects on stream 
macroinvertebrates in the conterminous western United States, Alaska, and 
Hawaii, 1992–2000.}},
year = {2012}
}

I redacted most of the abstract to save space as the issue is with the name.

Thanks for pointing out my mistake,

Rich
--
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


Re: JabRef entry warning

2021-10-12 Thread Paul A. Rubin

On 10/12/21 1:00 PM, Rich Shepard wrote:
Biber tells me "WARN - Name in key 'Paul2012' is empty (probably 
consecutive

'and'): skipping entry 'Paul2012'" and the entry in the jabrefdb.bib is:
@techreport{Paul2017,
abstract = {This paper summarizes the application of algae as 
indicators of nutrient

pollution in water quality management. It describes the use of algal
indicators to develop water quality diagnostics for nutrient 
pollution

in the United States (U.S.) and then reviews scientific developments
in the use and application of algal indicators across the world.
The paper is intended as a technical resource for the water quality
manager/practitioner seeking to utilize algae to detect the presence
of nutrient pollution and to estimate the risks of nutrient pollution
in adversely affecting the condition of stream ecosystems.},
author = {Paul, M.J.},
institution = {Tetra Tech, Inc./ Center for Ecological Sciences},
keywords = {streams, rivers, lakes, ponds, algae, pollution, water 
quality, indicators},

pagetotal = {44},
title = {{Algal Indicators in Streams: A Review of Their 
Application in Water Quality Management of Nutrient Pollution}},

type = {techreport},
year = {2017}
}

I'm not seeing the empty error in the name. Why does biber find it empty?

Rich


Rich,

You mention 'Paul2012' in the warning but show the entry with key 
'Paul2017'. Is one of those a typo, or did you show us the wrong entry?


Paul2021

--
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


Re: JabRef entry warning

2021-10-12 Thread Kornel Benko
Am Tue, 12 Oct 2021 10:00:08 -0700 (PDT)
schrieb Rich Shepard :

> Biber tells me "WARN - Name in key 'Paul2012' is empty (probably consecutive
> 'and'): skipping entry 'Paul2012'" and the entry in the jabrefdb.bib is:
> @techreport{Paul2017,
>   abstract = {This paper summarizes the application of algae as 
> indicators of
> nutrient pollution in water quality management. It describes the use of algal
>   indicators to develop water quality diagnostics for nutrient pollution
>   in the United States (U.S.) and then reviews scientific developments
>   in the use and application of algal indicators across the world.
>   The paper is intended as a technical resource for the water quality
>   manager/practitioner seeking to utilize algae to detect the presence
>   of nutrient pollution and to estimate the risks of nutrient pollution
>   in adversely affecting the condition of stream ecosystems.},
>   author = {Paul, M.J.},
>   institution = {Tetra Tech, Inc./ Center for Ecological Sciences},
>   keywords = {streams, rivers, lakes, ponds, algae, pollution, water 
> quality,
> indicators}, pagetotal = {44},
>   title = {{Algal Indicators in Streams: A Review of Their Application in 
> Water
> Quality Management of Nutrient Pollution}}, type = {techreport},
>   year = {2017}
> }
> 
> I'm not seeing the empty error in the name. Why does biber find it empty?
> 
> Rich
> 

Warning from 'Paul2012', but you cite 'Paul2017' here.

Kornel


pgp0Z5TQ3ELx2.pgp
Description: Digitale Signatur von OpenPGP
-- 
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users


JabRef entry warning

2021-10-12 Thread Rich Shepard

Biber tells me "WARN - Name in key 'Paul2012' is empty (probably consecutive
'and'): skipping entry 'Paul2012'" and the entry in the jabrefdb.bib is:
@techreport{Paul2017,
abstract = {This paper summarizes the application of algae as 
indicators of nutrient
pollution in water quality management. It describes the use of algal
indicators to develop water quality diagnostics for nutrient pollution
in the United States (U.S.) and then reviews scientific developments
in the use and application of algal indicators across the world.
The paper is intended as a technical resource for the water quality
manager/practitioner seeking to utilize algae to detect the presence
of nutrient pollution and to estimate the risks of nutrient pollution
in adversely affecting the condition of stream ecosystems.},
author = {Paul, M.J.},
institution = {Tetra Tech, Inc./ Center for Ecological Sciences},
keywords = {streams, rivers, lakes, ponds, algae, pollution, water 
quality, indicators},
pagetotal = {44},
title = {{Algal Indicators in Streams: A Review of Their Application in 
Water Quality Management of Nutrient Pollution}},
type = {techreport},
year = {2017}
}

I'm not seeing the empty error in the name. Why does biber find it empty?

Rich

--
lyx-users mailing list
lyx-users@lists.lyx.org
http://lists.lyx.org/mailman/listinfo/lyx-users