Re: [matplotlib-devel] Dendrogram

2007-05-23 Thread Andrew Straw
Timothy wrote:
> Please let me know if there is a 
> better way to submit the code.
>   
Hi Timothy,

If you make it into a complete example that plots something, send it as
an attachment to the list (so their are no line-break issues), I will
commit it into the examples directory. From there, we can figure out
where the key dendrogram() function should live, but at least your work
will get in the repository as soon as possible.

-Andrew

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Re: [matplotlib-devel] corner artifacts

2007-05-23 Thread Tom Holroyd (NIH/NIMH) [E]
Works for me, python 2.4, matplotlib 0.90.0, .matplotlibrc:
numerix: numpy
backend: GTKAgg

even with lw=20

John Hunter wrote:
> I seem to be getting some corner artifacts when using *Agg that I
> haven't seen before.  Anyone else seeing something strange and any
> idea why?
> 
> import numpy
> 
> from pylab import figure, show
> 
> t = numpy.arange(0.0, 1.0, 0.1)
> s = numpy.ones(len(t), dtype=numpy.float_)
> s[1::2] = 0.
> 
> fig = figure()
> ax = fig.add_subplot(111)
> ax.plot(t, s, '-', lw=2)
> ax.set_ylim(-.5, 1.5)
> show()
>

-- 
Tom Holroyd, Ph.D.
"The fundamentally misconceived nature versus nurture debate should be
abandoned: child development is inextricably both." -- Louann Brizendine

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Re: [matplotlib-devel] corner artifacts

2007-05-23 Thread Jeff Whitaker
John Hunter wrote:
> I seem to be getting some corner artifacts when using *Agg that I
> haven't seen before.  Anyone else seeing something strange and any
> idea why?
>
> import numpy
>
> from pylab import figure, show
>
> t = numpy.arange(0.0, 1.0, 0.1)
> s = numpy.ones(len(t), dtype=numpy.float_)
> s[1::2] = 0.
>
> fig = figure()
> ax = fig.add_subplot(111)
> ax.plot(t, s, '-', lw=2)
> ax.set_ylim(-.5, 1.5)
> show()

Confirmed with GTKAgg on OS X, latest svn (but not with 0.90).  No idea 
why though.

-Jeff

-- 
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Re: [matplotlib-devel] corner artifacts

2007-05-23 Thread Glen W. Mabey
On Wed, May 23, 2007 at 03:15:45PM -0500, John Hunter wrote:
> I seem to be getting some corner artifacts when using *Agg that I
> haven't seen before.  Anyone else seeing something strange and any
> idea why?

I started seeing them with the QtAgg backend when I updated the svn
version I was using.  That was about 2 weeks ago, and the previous
version was about 6 weeks old, at that point.

Glen

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Re: [matplotlib-devel] corner artifacts

2007-05-23 Thread Fernando Perez
On 5/23/07, John Hunter <[EMAIL PROTECTED]> wrote:
> I seem to be getting some corner artifacts when using *Agg that I
> haven't seen before.  Anyone else seeing something strange and any
> idea why?

Glad you wrote this, I was about to.  I noticed them only recently,
and they're driving me nuts.  They aren't just corners, they have to
do with the overlap of two lines and Agg messing something up when
thick lines overlap.

Here's an example that illustrates it more easily (that's how I ran into it):


import numpy as N

from pylab import figure, show

t = N.linspace(-1.0, 1.0, 2001)
s = N.exp(-300*N.abs(t))

fig = figure()
ax = fig.add_subplot(111)
ax.plot(t, s, '-', lw=2)
show()

###

Plot this, then click on the little zoom tool (the cross) and do a
horizontal right-mouse motion to widen/tighten the exponential.
You'll see the white artifact move across the region of overlap of the
vertical lines.

Fortunately for me, the generated EPS don't have the problem (it's a
pure Agg bug), so I'm OK for the final output.  But it's really
annoying on screen.  My plots have tons of nearly retracing lines on
them, and they look atrociously bad now.

Cheers,

f

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