[Matplotlib-users] subplots with the OO interface (ax.rowNum, ax.colNum)

2007-03-20 Thread Ryan Krauss
I have a figure with 2 subplots (2 rows, 1 column) created using the
OO interface like this:

ax1=fig.add_subplot(2,1,1)
ax2=fig.add_subplot(2,1,2)

After I have created these axes and plotted things on them, I want to
be able to set their x and y lims.  The function that creates the plot
returns fig.  I can then get to a list of the axes from fig.axes.  My
question is this: can I know from the list of axes or their individual
properties which one is which - i.e. which one is the top one and
which one is the bottom one?  It looks like ax1.rowNum and colNum
should refer to the parameters I want (rowNum in this case, since
there is only one column).  But there isn't a docstring for them.  Is
this there intended use (or at least a safe use of them)?

99% of the time, I will create the top one first so topfig=fig.axes[0]
and bottomfig=fig.axes[1].  But if I ever screw that up, it could be
bad.

Thanks,

Ryan

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Re: [Matplotlib-users] subplots with the OO interface (ax.rowNum, ax.colNum)

2007-03-20 Thread John Hunter
On 3/20/07, Ryan Krauss [EMAIL PROTECTED] wrote:
 I have a figure with 2 subplots (2 rows, 1 column) created using the
 OO interface like this:

 ax1=fig.add_subplot(2,1,1)
 ax2=fig.add_subplot(2,1,2)

 After I have created these axes and plotted things on them, I want to
 be able to set their x and y lims.  The function that creates the plot
 returns fig.  I can then get to a list of the axes from fig.axes.  My
 question is this: can I know from the list of axes or their individual
 properties which one is which - i.e. which one is the top one and
 which one is the bottom one?  It looks like ax1.rowNum and colNum
 should refer to the parameters I want (rowNum in this case, since
 there is only one column).  But there isn't a docstring for them.  Is
 this there intended use (or at least a safe use of them)?

 99% of the time, I will create the top one first so topfig=fig.axes[0]
 and bottomfig=fig.axes[1].  But if I ever screw that up, it could be
 bad.


If you are creating subplots, you can do

rows, cols, num = ax.get_geometry()

You can also change the geometry with set_geometry.

There are a couple of Subplot helper functions you may find useful, eg
to selectively apply x and ylabeling:

def is_first_col(self):
return self.colNum==0

def is_first_row(self):
return self.rowNum==0

def is_last_row(self):
return self.rowNum==self.numRows-1

def is_last_col(self):
return self.colNum==self.numCols-1

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Re: [Matplotlib-users] subplots with the OO interface (ax.rowNum, ax.colNum)

2007-03-20 Thread Ryan Krauss
Thanks John.  That will work.

Ryan

On 3/20/07, John Hunter [EMAIL PROTECTED] wrote:
 On 3/20/07, Ryan Krauss [EMAIL PROTECTED] wrote:
  I have a figure with 2 subplots (2 rows, 1 column) created using the
  OO interface like this:
 
  ax1=fig.add_subplot(2,1,1)
  ax2=fig.add_subplot(2,1,2)
 
  After I have created these axes and plotted things on them, I want to
  be able to set their x and y lims.  The function that creates the plot
  returns fig.  I can then get to a list of the axes from fig.axes.  My
  question is this: can I know from the list of axes or their individual
  properties which one is which - i.e. which one is the top one and
  which one is the bottom one?  It looks like ax1.rowNum and colNum
  should refer to the parameters I want (rowNum in this case, since
  there is only one column).  But there isn't a docstring for them.  Is
  this there intended use (or at least a safe use of them)?
 
  99% of the time, I will create the top one first so topfig=fig.axes[0]
  and bottomfig=fig.axes[1].  But if I ever screw that up, it could be
  bad.


 If you are creating subplots, you can do

 rows, cols, num = ax.get_geometry()

 You can also change the geometry with set_geometry.

 There are a couple of Subplot helper functions you may find useful, eg
 to selectively apply x and ylabeling:

 def is_first_col(self):
 return self.colNum==0

 def is_first_row(self):
 return self.rowNum==0

 def is_last_row(self):
 return self.rowNum==self.numRows-1

 def is_last_col(self):
 return self.colNum==self.numCols-1


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Re: [Matplotlib-users] Iterate and save multiple plots

2007-03-20 Thread Ana Paula Leite

It's just as simple as:

savefig('name1'+'_'+'name2')
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[Matplotlib-users] Memory leak with FigureCanvasTk

2007-03-20 Thread Pellegrini Eric
Hi,
   
  I have a problem of memory leak using the following code:
   
  

  from Tkinter import *
  from matplotlib.backends.backend_tkagg import FigureCanvasTkAgg
  import pylab
   
  def display():
  mat = pylab.zeros((100,100))
  pylab.ioff()
  image = pylab.matshow(mat)
  pylab.ion()
  pylab.close()
  can = FigureCanvasTkAgg(image, master=frame)
  can.show()
  can.get_tk_widget().grid(row = 0,column = 0)
   
  root = Tk()
  frame = Frame(root)
  frame.grid(row = 0,column = 0)
  canvas = Canvas(frame, width = 240, height = 240, relief = sunken, bg = 
white) 
  canvas.grid()
  button = Button(root,text=DisplayMatrix,command = display)
  button.grid(row = 1,column = 0)
  
***
   
  would you have any idea of what is going wrong ?
   
  Thank you very much
   
  Eric
   
   
   
   
   
   
   
   
   
   


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[Matplotlib-users] Question about pylab.figure

2007-03-20 Thread Pellegrini Eric
Hi everybody,
   
  when repeating the following sequence:
   
  pylab.figure()
  pylab.close()
   
  the memory used increases like if something remained. Would you have any idea 
of what is going on ? How to solve this kind of memory leak ?
   
  thank you very much
   
  Eruc 


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Re: [Matplotlib-users] Question about pylab.figure

2007-03-20 Thread Eric Firing

Pellegrini Eric wrote:

Hi everybody,
 
when repeating the following sequence:
 
pylab.figure()

pylab.close()
 
the memory used increases like if something remained. Would you have any 
idea of what is going on ? How to solve this kind of memory leak ?


I have confirmed this with svn on linux (default backend, GtkAgg) using 
the attached script.  We are losing about 17k per loop.  The usual 
memory leak checker still indicates that things are OK.  The difference 
appears to be the backend. The attached script with Agg instead of 
GtkAgg is OK; but with TkAgg it also leaks.  It looks like there is 
something in the interactive backend setup that is not getting cleaned 
up by close().


Thanks for pointing it out.

Eric
#!/usr/bin/env python

import os, sys, time
import matplotlib
#matplotlib.interactive(True)
#matplotlib.use('Cairo')
matplotlib.use('TkAgg')
import pylab

def report_memory(i):
pid = os.getpid()
a2 = os.popen('ps -p %d -o rss,sz' % pid).readlines()
print i, '  ', a2[1],
return int(a2[1].split()[1])



# take a memory snapshot on indStart and compare it with indEnd

indStart, indEnd = 30, 201
for i in range(indEnd):

pylab.figure()
pylab.close()

val = report_memory(i)
if i==indStart: start = val # wait a few cycles for memory usage to stabilize

end = val
print 'Average memory consumed per loop: %1.4fk bytes\n' % ((end-start)/float(indEnd-indStart))


Average memory consumed per loop: 0.0053k bytes

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Re: [Matplotlib-users] cumulative distribution function

2007-03-20 Thread John Hunter
On 3/20/07, Simson Garfinkel [EMAIL PROTECTED] wrote:
 Thanks for the information. Unfortunately, this CDF doesn't look like
 the CDF that we see in other published papers. I'm not sure what they
 are done with...  But they have a thin line that shows the integral
 of all measurements, rather than a bar graph. The problem with a bar
 graph is that different bin widths give different results.

 GNU Plot seems to do a decent job, as can e seen at http://
 chem.skku.ac.kr/~wkpark/tutor/gnuplot/gpdocs/prob.htm. But there
 should be a way to do this nicely with matplotlib, right?

Just replace

  ax.bar(bins, p)

with

  ax.plot(bins, b)

in the example code I posted previously...

JDH

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