Re: [Matplotlib-users] colorbllind problem

2014-02-19 Thread Gabriele Brambilla
it works indexing the palette.

thanks

Gabriele


2014-02-18 13:57 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Try specifying the color explicitly from the palette object:
 import numpy as np
 import matplotlib.pyplot as plt
 import pandas
 import seaborn

 myPalet1 = seaborn.color_palette(RdPu_r, 10)
 seaborn.set_color_palette(myPalet1)
 x = np.linspace(start=0, stop=5, num=100)
 fig, ax = plt.subplots()
 for n, slope in enumerate(np.linspace(start=0, stop=5, num=10)):
 ax.plot(x, slope*x**2, color=myPalet1[n])


 On Tue, Feb 18, 2014 at 10:30 AM, Gabriele Brambilla 
 gb.gabrielebrambi...@gmail.com wrote:

 Hi,
 I get right one plot, but this other one works in a strange way:

 it restarts to give the darker color to a line. I would like to assign
 the colors in the right order so the colorblind guy that works with me
 could see the differences like a light growing. (I attach the image) do you
 understand where am I doing wrong? (before this piece of code I use other
 color palette but I think they have no effect on the following ones)

 zipPARApha = zip(Pampli, Pgamma, Pecut, Pb, g)

 myPalet1 = sns.color_palette(RdPu_r, 10)
 sns.set_color_palette(myPalet1)
 lotgr = plt.figure()
 axius = lotgr.add_subplot(111)
 for n, (a1,b1,c1,d1,pha) in enumerate(zipPARApha):
if n % 18 == 0:
   fittedval = spock(logeels, a1, b1, c1, d1)
   phaint = int(pha)
   angli = str(phaint)
   imig = axius.plot(logeels, fittedval, label=angli)

 axius.set_title('phase resolved spectra, ' + lightitle)
 axius.set_ylim([-100, 1])
 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)
 lotgr.canvas.draw()

 thanks

 Gabriele


 2014-02-18 10:47 GMT-05:00 Gabriele Brambilla 
 gb.gabrielebrambi...@gmail.com:

 it works, thank you.

 Using a color palette that changes only the intensity/light of the color
 (all blue lines) helps.

 Gabriele


 2014-02-17 20:57 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Untested, of course, but I would do something like this:

 import matplotlib.pyplot as plt
 import seaborn

 N = len(As)

 myPallette = seaborn.color_palette(skyblue, N)  # use the name of
  any mpl colormap here
 seaborn.set_color_pallette(myPallette)

 zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)
 lotgr = plt.figure()
 axius = lotgr.add_subplot(111)

 for a1,b1,c1,d1,angol in zipPARA:
 fittedval = spock(logeels, a1, b1, c1, d1)
 angli = str(angol)
 imig = axius.plot(logeels, fittedval, label=angli)

 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)
 lotgr.canvas.draw()


 On Mon, Feb 17, 2014 at 3:00 PM, Gabriele Brambilla 
 gb.gabrielebrambi...@gmail.com wrote:

 Hi, I would like to set the color of the different plots with seaborn
 but I don't find examples of this kind on the tutorial.
 How could I modify this code? the zip() arguments are lists of the
 same dimension.

 zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)

 lotgr = plt.figure()

 axius = lotgr.add_subplot(111)

 for a1,b1,c1,d1,angol in zipPARA:

 fittedval = spock(logeels, a1, b1, c1, d1)

 angli = str(angol)

 imig = axius.plot(logeels, fittedval, label=angli)

 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)

 lotgr.canvas.draw()

 thanks

 Gabriele


 2014-02-17 14:46 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Adam,

 Look into the seaborn project:

 http://nbviewer.ipython.org/github/mwaskom/seaborn/blob/master/examples/aesthetics.ipynb

 it's easy enough to define your own color palettes or select existing
 ones.
 -paul


 On Mon, Feb 17, 2014 at 11:41 AM, Adam Hughes hughesada...@gmail.com
  wrote:

 I'm wondering if the matplotlib API is designed in such a way that
 choosing a color schema could be done at import time.  I know that the
 entire plot style can be changed in one call (eg put plt.xkcd() at the
 beginning of your code), so I wander if colorblind-compatible colors 
 could
 be loaded in a similar, quick way.


 On Mon, Feb 17, 2014 at 1:52 PM, ChaoYue chaoyue...@gmail.comwrote:

 Hi Gabriele,

 I'm afraid you have to put the numbers by yourself using the
 plt.text, as in an example:
 a = np.arange(10)
 b = np.tile(a,(10,1))
 c = np.tile(a[:,np.newaxis],(10)) + b
 plot(c)
 for i in range(10):
 plt.text(5,c[i][5],str(i))


 I've askd by a review to use the colorblind compatible colors when
 trying to submit a paper,
 and I find a website below:
 http://jfly.iam.u-tokyo.ac.jp/color/

 I put some RGB numbers for some colors here if you feel like to
 have a try:
 CCC =
 {

 'Black':np.array([0,0,0])/255.,

 'Orange':np.array([230,159,0])/255.,

 'Skyblue':np.array([85,180,233])/255.,

 'BluishGreen':np.array([0,158,115])/255.,

 'Yellow':np.array([240,228,66])/255.,

 'Blue':np.array([0,114,178])/255.,

 'Vermilion':np.array([213,94,0])/255.,

 'ReddishPurple':np.array([204,121,167])/255.
}

 Cheers,

 Chao



 On Mon, Feb 17, 2014 at 7:17 PM, Gabriele Brambilla [via
 matplotlib] [hidden 
 

Re: [Matplotlib-users] colorbllind problem

2014-02-18 Thread Gabriele Brambilla
it works, thank you.

Using a color palette that changes only the intensity/light of the color
(all blue lines) helps.

Gabriele


2014-02-17 20:57 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Untested, of course, but I would do something like this:

 import matplotlib.pyplot as plt
 import seaborn

 N = len(As)

 myPallette = seaborn.color_palette(skyblue, N)  # use the name of  any
 mpl colormap here
 seaborn.set_color_pallette(myPallette)

 zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)
 lotgr = plt.figure()
 axius = lotgr.add_subplot(111)

 for a1,b1,c1,d1,angol in zipPARA:
 fittedval = spock(logeels, a1, b1, c1, d1)
 angli = str(angol)
 imig = axius.plot(logeels, fittedval, label=angli)

 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)
 lotgr.canvas.draw()


 On Mon, Feb 17, 2014 at 3:00 PM, Gabriele Brambilla 
 gb.gabrielebrambi...@gmail.com wrote:

 Hi, I would like to set the color of the different plots with seaborn but
 I don't find examples of this kind on the tutorial.
 How could I modify this code? the zip() arguments are lists of the same
 dimension.

 zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)

 lotgr = plt.figure()

 axius = lotgr.add_subplot(111)

 for a1,b1,c1,d1,angol in zipPARA:

 fittedval = spock(logeels, a1, b1, c1, d1)

 angli = str(angol)

 imig = axius.plot(logeels, fittedval, label=angli)

 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)

 lotgr.canvas.draw()

 thanks

 Gabriele


 2014-02-17 14:46 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Adam,

 Look into the seaborn project:

 http://nbviewer.ipython.org/github/mwaskom/seaborn/blob/master/examples/aesthetics.ipynb

 it's easy enough to define your own color palettes or select existing
 ones.
 -paul


 On Mon, Feb 17, 2014 at 11:41 AM, Adam Hughes hughesada...@gmail.comwrote:

 I'm wondering if the matplotlib API is designed in such a way that
 choosing a color schema could be done at import time.  I know that the
 entire plot style can be changed in one call (eg put plt.xkcd() at the
 beginning of your code), so I wander if colorblind-compatible colors could
 be loaded in a similar, quick way.


 On Mon, Feb 17, 2014 at 1:52 PM, ChaoYue chaoyue...@gmail.com wrote:

 Hi Gabriele,

 I'm afraid you have to put the numbers by yourself using the plt.text,
 as in an example:
 a = np.arange(10)
 b = np.tile(a,(10,1))
 c = np.tile(a[:,np.newaxis],(10)) + b
 plot(c)
 for i in range(10):
 plt.text(5,c[i][5],str(i))


 I've askd by a review to use the colorblind compatible colors when
 trying to submit a paper,
 and I find a website below:
 http://jfly.iam.u-tokyo.ac.jp/color/

 I put some RGB numbers for some colors here if you feel like to have a
 try:
 CCC =
 {

 'Black':np.array([0,0,0])/255.,

 'Orange':np.array([230,159,0])/255.,

 'Skyblue':np.array([85,180,233])/255.,

 'BluishGreen':np.array([0,158,115])/255.,

 'Yellow':np.array([240,228,66])/255.,

 'Blue':np.array([0,114,178])/255.,

 'Vermilion':np.array([213,94,0])/255.,

 'ReddishPurple':np.array([204,121,167])/255.
}

 Cheers,

 Chao



 On Mon, Feb 17, 2014 at 7:17 PM, Gabriele Brambilla [via matplotlib] 
 [hidden
 email] http://user/SendEmail.jtp?type=nodenode=42886i=0 wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion on how could I show a plot like the one
 attached to him?
 Is there an option in pyplot that write little numbers near the
 curves instead of colors?

 thanks

 Gabriele

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Re: [Matplotlib-users] colorbllind problem

2014-02-18 Thread Gabriele Brambilla
Hi,
I get right one plot, but this other one works in a strange way:

it restarts to give the darker color to a line. I would like to assign the
colors in the right order so the colorblind guy that works with me could
see the differences like a light growing. (I attach the image) do you
understand where am I doing wrong? (before this piece of code I use other
color palette but I think they have no effect on the following ones)

zipPARApha = zip(Pampli, Pgamma, Pecut, Pb, g)

myPalet1 = sns.color_palette(RdPu_r, 10)
sns.set_color_palette(myPalet1)
lotgr = plt.figure()
axius = lotgr.add_subplot(111)
for n, (a1,b1,c1,d1,pha) in enumerate(zipPARApha):
   if n % 18 == 0:
  fittedval = spock(logeels, a1, b1, c1, d1)
  phaint = int(pha)
  angli = str(phaint)
  imig = axius.plot(logeels, fittedval, label=angli)

axius.set_title('phase resolved spectra, ' + lightitle)
axius.set_ylim([-100, 1])
axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)
lotgr.canvas.draw()

thanks

Gabriele


2014-02-18 10:47 GMT-05:00 Gabriele Brambilla 
gb.gabrielebrambi...@gmail.com:

 it works, thank you.

 Using a color palette that changes only the intensity/light of the color
 (all blue lines) helps.

 Gabriele


 2014-02-17 20:57 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Untested, of course, but I would do something like this:

 import matplotlib.pyplot as plt
 import seaborn

 N = len(As)

 myPallette = seaborn.color_palette(skyblue, N)  # use the name of  any
 mpl colormap here
 seaborn.set_color_pallette(myPallette)

 zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)
 lotgr = plt.figure()
 axius = lotgr.add_subplot(111)

 for a1,b1,c1,d1,angol in zipPARA:
 fittedval = spock(logeels, a1, b1, c1, d1)
 angli = str(angol)
 imig = axius.plot(logeels, fittedval, label=angli)

 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)
 lotgr.canvas.draw()


 On Mon, Feb 17, 2014 at 3:00 PM, Gabriele Brambilla 
 gb.gabrielebrambi...@gmail.com wrote:

 Hi, I would like to set the color of the different plots with seaborn
 but I don't find examples of this kind on the tutorial.
 How could I modify this code? the zip() arguments are lists of the same
 dimension.

 zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)

 lotgr = plt.figure()

 axius = lotgr.add_subplot(111)

 for a1,b1,c1,d1,angol in zipPARA:

 fittedval = spock(logeels, a1, b1, c1, d1)

 angli = str(angol)

 imig = axius.plot(logeels, fittedval, label=angli)

 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)

 lotgr.canvas.draw()

 thanks

 Gabriele


 2014-02-17 14:46 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Adam,

 Look into the seaborn project:

 http://nbviewer.ipython.org/github/mwaskom/seaborn/blob/master/examples/aesthetics.ipynb

 it's easy enough to define your own color palettes or select existing
 ones.
 -paul


 On Mon, Feb 17, 2014 at 11:41 AM, Adam Hughes 
 hughesada...@gmail.comwrote:

 I'm wondering if the matplotlib API is designed in such a way that
 choosing a color schema could be done at import time.  I know that the
 entire plot style can be changed in one call (eg put plt.xkcd() at the
 beginning of your code), so I wander if colorblind-compatible colors could
 be loaded in a similar, quick way.


 On Mon, Feb 17, 2014 at 1:52 PM, ChaoYue chaoyue...@gmail.com wrote:

 Hi Gabriele,

 I'm afraid you have to put the numbers by yourself using the
 plt.text, as in an example:
 a = np.arange(10)
 b = np.tile(a,(10,1))
 c = np.tile(a[:,np.newaxis],(10)) + b
 plot(c)
 for i in range(10):
 plt.text(5,c[i][5],str(i))


 I've askd by a review to use the colorblind compatible colors when
 trying to submit a paper,
 and I find a website below:
 http://jfly.iam.u-tokyo.ac.jp/color/

 I put some RGB numbers for some colors here if you feel like to have
 a try:
 CCC =
 {

 'Black':np.array([0,0,0])/255.,

 'Orange':np.array([230,159,0])/255.,

 'Skyblue':np.array([85,180,233])/255.,

 'BluishGreen':np.array([0,158,115])/255.,

 'Yellow':np.array([240,228,66])/255.,

 'Blue':np.array([0,114,178])/255.,

 'Vermilion':np.array([213,94,0])/255.,

 'ReddishPurple':np.array([204,121,167])/255.
}

 Cheers,

 Chao



 On Mon, Feb 17, 2014 at 7:17 PM, Gabriele Brambilla [via matplotlib]
 [hidden email] 
 http://user/SendEmail.jtp?type=nodenode=42886i=0wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion on how could I show a plot like the one
 attached to him?
 Is there an option in pyplot that write little numbers near the
 curves instead of colors?

 thanks

 Gabriele

 --

 Managing the Performance of Cloud-Based Applications
 Take advantage of what the Cloud has to offer - Avoid Common
 Pitfalls.
 Read the Whitepaper.

 http://pubads.g.doubleclick.net/gampad/clk?id=121054471iu=/4140/ostg.clktrk
 

Re: [Matplotlib-users] colorbllind problem

2014-02-18 Thread Paul Hobson
Try specifying the color explicitly from the palette object:
import numpy as np
import matplotlib.pyplot as plt
import pandas
import seaborn

myPalet1 = seaborn.color_palette(RdPu_r, 10)
seaborn.set_color_palette(myPalet1)
x = np.linspace(start=0, stop=5, num=100)
fig, ax = plt.subplots()
for n, slope in enumerate(np.linspace(start=0, stop=5, num=10)):
ax.plot(x, slope*x**2, color=myPalet1[n])


On Tue, Feb 18, 2014 at 10:30 AM, Gabriele Brambilla 
gb.gabrielebrambi...@gmail.com wrote:

 Hi,
 I get right one plot, but this other one works in a strange way:

 it restarts to give the darker color to a line. I would like to assign the
 colors in the right order so the colorblind guy that works with me could
 see the differences like a light growing. (I attach the image) do you
 understand where am I doing wrong? (before this piece of code I use other
 color palette but I think they have no effect on the following ones)

 zipPARApha = zip(Pampli, Pgamma, Pecut, Pb, g)

 myPalet1 = sns.color_palette(RdPu_r, 10)
 sns.set_color_palette(myPalet1)
 lotgr = plt.figure()
 axius = lotgr.add_subplot(111)
 for n, (a1,b1,c1,d1,pha) in enumerate(zipPARApha):
if n % 18 == 0:
   fittedval = spock(logeels, a1, b1, c1, d1)
   phaint = int(pha)
   angli = str(phaint)
   imig = axius.plot(logeels, fittedval, label=angli)

 axius.set_title('phase resolved spectra, ' + lightitle)
 axius.set_ylim([-100, 1])
 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)
 lotgr.canvas.draw()

 thanks

 Gabriele


 2014-02-18 10:47 GMT-05:00 Gabriele Brambilla 
 gb.gabrielebrambi...@gmail.com:

 it works, thank you.

 Using a color palette that changes only the intensity/light of the color
 (all blue lines) helps.

 Gabriele


 2014-02-17 20:57 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Untested, of course, but I would do something like this:

 import matplotlib.pyplot as plt
 import seaborn

 N = len(As)

 myPallette = seaborn.color_palette(skyblue, N)  # use the name of  any
 mpl colormap here
 seaborn.set_color_pallette(myPallette)

 zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)
 lotgr = plt.figure()
 axius = lotgr.add_subplot(111)

 for a1,b1,c1,d1,angol in zipPARA:
 fittedval = spock(logeels, a1, b1, c1, d1)
 angli = str(angol)
 imig = axius.plot(logeels, fittedval, label=angli)

 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)
 lotgr.canvas.draw()


 On Mon, Feb 17, 2014 at 3:00 PM, Gabriele Brambilla 
 gb.gabrielebrambi...@gmail.com wrote:

 Hi, I would like to set the color of the different plots with seaborn
 but I don't find examples of this kind on the tutorial.
 How could I modify this code? the zip() arguments are lists of the same
 dimension.

 zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)

 lotgr = plt.figure()

 axius = lotgr.add_subplot(111)

 for a1,b1,c1,d1,angol in zipPARA:

 fittedval = spock(logeels, a1, b1, c1, d1)

 angli = str(angol)

 imig = axius.plot(logeels, fittedval, label=angli)

 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)

 lotgr.canvas.draw()

 thanks

 Gabriele


 2014-02-17 14:46 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Adam,

 Look into the seaborn project:

 http://nbviewer.ipython.org/github/mwaskom/seaborn/blob/master/examples/aesthetics.ipynb

 it's easy enough to define your own color palettes or select existing
 ones.
 -paul


 On Mon, Feb 17, 2014 at 11:41 AM, Adam Hughes 
 hughesada...@gmail.comwrote:

 I'm wondering if the matplotlib API is designed in such a way that
 choosing a color schema could be done at import time.  I know that the
 entire plot style can be changed in one call (eg put plt.xkcd() at the
 beginning of your code), so I wander if colorblind-compatible colors 
 could
 be loaded in a similar, quick way.


 On Mon, Feb 17, 2014 at 1:52 PM, ChaoYue chaoyue...@gmail.comwrote:

 Hi Gabriele,

 I'm afraid you have to put the numbers by yourself using the
 plt.text, as in an example:
 a = np.arange(10)
 b = np.tile(a,(10,1))
 c = np.tile(a[:,np.newaxis],(10)) + b
 plot(c)
 for i in range(10):
 plt.text(5,c[i][5],str(i))


 I've askd by a review to use the colorblind compatible colors when
 trying to submit a paper,
 and I find a website below:
 http://jfly.iam.u-tokyo.ac.jp/color/

 I put some RGB numbers for some colors here if you feel like to have
 a try:
 CCC =
 {

 'Black':np.array([0,0,0])/255.,

 'Orange':np.array([230,159,0])/255.,

 'Skyblue':np.array([85,180,233])/255.,

 'BluishGreen':np.array([0,158,115])/255.,

 'Yellow':np.array([240,228,66])/255.,

 'Blue':np.array([0,114,178])/255.,

 'Vermilion':np.array([213,94,0])/255.,

 'ReddishPurple':np.array([204,121,167])/255.
}

 Cheers,

 Chao



 On Mon, Feb 17, 2014 at 7:17 PM, Gabriele Brambilla [via matplotlib]
 [hidden email] http://user/SendEmail.jtp?type=nodenode=42886i=0
  wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion 

Re: [Matplotlib-users] colorbllind problem

2014-02-17 Thread ChaoYue
Hi Gabriele,

I'm afraid you have to put the numbers by yourself using the plt.text, as
in an example:
a = np.arange(10)
b = np.tile(a,(10,1))
c = np.tile(a[:,np.newaxis],(10)) + b
plot(c)
for i in range(10):
plt.text(5,c[i][5],str(i))


I've askd by a review to use the colorblind compatible colors when trying
to submit a paper,
and I find a website below:
http://jfly.iam.u-tokyo.ac.jp/color/

I put some RGB numbers for some colors here if you feel like to have a try:
CCC =
{

'Black':np.array([0,0,0])/255.,

'Orange':np.array([230,159,0])/255.,

'Skyblue':np.array([85,180,233])/255.,

'BluishGreen':np.array([0,158,115])/255.,

'Yellow':np.array([240,228,66])/255.,

'Blue':np.array([0,114,178])/255.,

'Vermilion':np.array([213,94,0])/255.,

'ReddishPurple':np.array([204,121,167])/255.
   }

Cheers,

Chao



On Mon, Feb 17, 2014 at 7:17 PM, Gabriele Brambilla [via matplotlib] 
ml-node+s1069221n42884...@n5.nabble.com wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion on how could I show a plot like the one
 attached to him?
 Is there an option in pyplot that write little numbers near the curves
 instead of colors?

 thanks

 Gabriele

 --

 Managing the Performance of Cloud-Based Applications
 Take advantage of what the Cloud has to offer - Avoid Common Pitfalls.
 Read the Whitepaper.

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Re: [Matplotlib-users] colorbllind problem

2014-02-17 Thread Adam Hughes
I'm wondering if the matplotlib API is designed in such a way that choosing
a color schema could be done at import time.  I know that the entire plot
style can be changed in one call (eg put plt.xkcd() at the beginning of
your code), so I wander if colorblind-compatible colors could be loaded in
a similar, quick way.


On Mon, Feb 17, 2014 at 1:52 PM, ChaoYue chaoyue...@gmail.com wrote:

 Hi Gabriele,

 I'm afraid you have to put the numbers by yourself using the plt.text, as
 in an example:
 a = np.arange(10)
 b = np.tile(a,(10,1))
 c = np.tile(a[:,np.newaxis],(10)) + b
 plot(c)
 for i in range(10):
 plt.text(5,c[i][5],str(i))


 I've askd by a review to use the colorblind compatible colors when trying
 to submit a paper,
 and I find a website below:
 http://jfly.iam.u-tokyo.ac.jp/color/

 I put some RGB numbers for some colors here if you feel like to have a try:
 CCC =
 {

 'Black':np.array([0,0,0])/255.,

 'Orange':np.array([230,159,0])/255.,

 'Skyblue':np.array([85,180,233])/255.,

 'BluishGreen':np.array([0,158,115])/255.,

 'Yellow':np.array([240,228,66])/255.,

 'Blue':np.array([0,114,178])/255.,

 'Vermilion':np.array([213,94,0])/255.,

 'ReddishPurple':np.array([204,121,167])/255.
}

 Cheers,

 Chao



 On Mon, Feb 17, 2014 at 7:17 PM, Gabriele Brambilla [via matplotlib] [hidden
 email] http://user/SendEmail.jtp?type=nodenode=42886i=0 wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion on how could I show a plot like the one
 attached to him?
 Is there an option in pyplot that write little numbers near the curves
 instead of colors?

 thanks

 Gabriele

 --

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 Take advantage of what the Cloud has to offer - Avoid Common Pitfalls.
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 --

 ***
 Chao YUE
 Laboratoire des Sciences du Climat et de l'Environnement (LSCE-IPSL)
 UMR 1572 CEA-CNRS-UVSQ
 Batiment 712 - Pe 119
 91191 GIF Sur YVETTE Cedex
 Tel: (33) 01 69 08 29 02; Fax:01.69.08.77.16

 

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Re: [Matplotlib-users] colorbllind problem

2014-02-17 Thread Paul Hobson
Adam,

Look into the seaborn project:
http://nbviewer.ipython.org/github/mwaskom/seaborn/blob/master/examples/aesthetics.ipynb

it's easy enough to define your own color palettes or select existing ones.
-paul


On Mon, Feb 17, 2014 at 11:41 AM, Adam Hughes hughesada...@gmail.comwrote:

 I'm wondering if the matplotlib API is designed in such a way that
 choosing a color schema could be done at import time.  I know that the
 entire plot style can be changed in one call (eg put plt.xkcd() at the
 beginning of your code), so I wander if colorblind-compatible colors could
 be loaded in a similar, quick way.


 On Mon, Feb 17, 2014 at 1:52 PM, ChaoYue chaoyue...@gmail.com wrote:

 Hi Gabriele,

 I'm afraid you have to put the numbers by yourself using the plt.text, as
 in an example:
 a = np.arange(10)
 b = np.tile(a,(10,1))
 c = np.tile(a[:,np.newaxis],(10)) + b
 plot(c)
 for i in range(10):
 plt.text(5,c[i][5],str(i))


 I've askd by a review to use the colorblind compatible colors when trying
 to submit a paper,
 and I find a website below:
 http://jfly.iam.u-tokyo.ac.jp/color/

 I put some RGB numbers for some colors here if you feel like to have a
 try:
 CCC =
 {

 'Black':np.array([0,0,0])/255.,

 'Orange':np.array([230,159,0])/255.,

 'Skyblue':np.array([85,180,233])/255.,

 'BluishGreen':np.array([0,158,115])/255.,

 'Yellow':np.array([240,228,66])/255.,

 'Blue':np.array([0,114,178])/255.,

 'Vermilion':np.array([213,94,0])/255.,

 'ReddishPurple':np.array([204,121,167])/255.
}

 Cheers,

 Chao



 On Mon, Feb 17, 2014 at 7:17 PM, Gabriele Brambilla [via matplotlib] [hidden
 email] http://user/SendEmail.jtp?type=nodenode=42886i=0 wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion on how could I show a plot like the one
 attached to him?
 Is there an option in pyplot that write little numbers near the curves
 instead of colors?

 thanks

 Gabriele

 --

 Managing the Performance of Cloud-Based Applications
 Take advantage of what the Cloud has to offer - Avoid Common Pitfalls.
 Read the Whitepaper.

 http://pubads.g.doubleclick.net/gampad/clk?id=121054471iu=/4140/ostg.clktrk
 ___
 Matplotlib-users mailing list
 [hidden email] http://user/SendEmail.jtp?type=nodenode=42884i=0
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 --

 ***
 Chao YUE
 Laboratoire des Sciences du Climat et de l'Environnement (LSCE-IPSL)
 UMR 1572 CEA-CNRS-UVSQ
 Batiment 712 - Pe 119
 91191 GIF Sur YVETTE Cedex
 Tel: (33) 01 69 08 29 02; Fax:01.69.08.77.16

 

 --
 View this message in context: Re: colorbllind 
 problemhttp://matplotlib.1069221.n5.nabble.com/colorbllind-problem-tp42884p42886.html
 Sent from the matplotlib - users mailing list 
 archivehttp://matplotlib.1069221.n5.nabble.com/matplotlib-users-f3.htmlat 
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 --
 Managing the Performance of Cloud-Based Applications
 Take advantage of what the Cloud has to offer - Avoid Common Pitfalls.
 Read the Whitepaper.

 http://pubads.g.doubleclick.net/gampad/clk?id=121054471iu=/4140/ostg.clktrk
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 --
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 Take advantage of what the Cloud has to offer - Avoid Common Pitfalls.
 Read the Whitepaper.

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Re: [Matplotlib-users] colorbllind problem

2014-02-17 Thread Scott Lasley

On Feb 17, 2014, at 1:15 PM, Gabriele Brambilla 
gb.gabrielebrambi...@gmail.com wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion on how could I show a plot like the one attached 
 to him?
 Is there an option in pyplot that write little numbers near the curves 
 instead of colors?
 
 thanks
 
 Gabriele

Have you thought about plotting black lines and using different line styles?  
You could use very different line styles for lines that are close together such 
as 108.6 and 144.8 where trying to label the lines with a small number may be 
difficult.  You might also use different markers for each line.  You could only 
plot one or two markers if you don't want them cluttering up the lines.

hth,
Scott
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Re: [Matplotlib-users] colorbllind problem

2014-02-17 Thread C M
On Mon, Feb 17, 2014 at 1:15 PM, Gabriele Brambilla 
gb.gabrielebrambi...@gmail.com wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion on how could I show a plot like the one
 attached to him?
 Is there an option in pyplot that write little numbers near the curves
 instead of colors?


In addition to the other suggestions:  If this is a plot that is viewed on
his computer, you could also build in line picking, so that if the user
mouses over the line, information about that line is shown in the toolbar
or however you want.
--
Managing the Performance of Cloud-Based Applications
Take advantage of what the Cloud has to offer - Avoid Common Pitfalls.
Read the Whitepaper.
http://pubads.g.doubleclick.net/gampad/clk?id=121054471iu=/4140/ostg.clktrk___
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Re: [Matplotlib-users] colorbllind problem

2014-02-17 Thread Gabriele Brambilla
Hi, I would like to set the color of the different plots with seaborn but I
don't find examples of this kind on the tutorial.
How could I modify this code? the zip() arguments are lists of the same
dimension.

zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)

lotgr = plt.figure()

axius = lotgr.add_subplot(111)

for a1,b1,c1,d1,angol in zipPARA:

fittedval = spock(logeels, a1, b1, c1, d1)

angli = str(angol)

imig = axius.plot(logeels, fittedval, label=angli)

axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)

lotgr.canvas.draw()

thanks

Gabriele


2014-02-17 14:46 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Adam,

 Look into the seaborn project:

 http://nbviewer.ipython.org/github/mwaskom/seaborn/blob/master/examples/aesthetics.ipynb

 it's easy enough to define your own color palettes or select existing ones.
 -paul


 On Mon, Feb 17, 2014 at 11:41 AM, Adam Hughes hughesada...@gmail.comwrote:

 I'm wondering if the matplotlib API is designed in such a way that
 choosing a color schema could be done at import time.  I know that the
 entire plot style can be changed in one call (eg put plt.xkcd() at the
 beginning of your code), so I wander if colorblind-compatible colors could
 be loaded in a similar, quick way.


 On Mon, Feb 17, 2014 at 1:52 PM, ChaoYue chaoyue...@gmail.com wrote:

 Hi Gabriele,

 I'm afraid you have to put the numbers by yourself using the plt.text,
 as in an example:
 a = np.arange(10)
 b = np.tile(a,(10,1))
 c = np.tile(a[:,np.newaxis],(10)) + b
 plot(c)
 for i in range(10):
 plt.text(5,c[i][5],str(i))


 I've askd by a review to use the colorblind compatible colors when
 trying to submit a paper,
 and I find a website below:
 http://jfly.iam.u-tokyo.ac.jp/color/

 I put some RGB numbers for some colors here if you feel like to have a
 try:
 CCC =
 {

 'Black':np.array([0,0,0])/255.,

 'Orange':np.array([230,159,0])/255.,

 'Skyblue':np.array([85,180,233])/255.,

 'BluishGreen':np.array([0,158,115])/255.,

 'Yellow':np.array([240,228,66])/255.,

 'Blue':np.array([0,114,178])/255.,

 'Vermilion':np.array([213,94,0])/255.,

 'ReddishPurple':np.array([204,121,167])/255.
}

 Cheers,

 Chao



 On Mon, Feb 17, 2014 at 7:17 PM, Gabriele Brambilla [via matplotlib] 
 [hidden
 email] http://user/SendEmail.jtp?type=nodenode=42886i=0 wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion on how could I show a plot like the one
 attached to him?
 Is there an option in pyplot that write little numbers near the curves
 instead of colors?

 thanks

 Gabriele

 --

 Managing the Performance of Cloud-Based Applications
 Take advantage of what the Cloud has to offer - Avoid Common Pitfalls.
 Read the Whitepaper.

 http://pubads.g.doubleclick.net/gampad/clk?id=121054471iu=/4140/ostg.clktrk
 ___
 Matplotlib-users mailing list
 [hidden email] http://user/SendEmail.jtp?type=nodenode=42884i=0
 https://lists.sourceforge.net/lists/listinfo/matplotlib-users

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 --

 ***
 Chao YUE
 Laboratoire des Sciences du Climat et de l'Environnement (LSCE-IPSL)
 UMR 1572 CEA-CNRS-UVSQ
 Batiment 712 - Pe 119
 91191 GIF Sur YVETTE Cedex
 Tel: (33) 01 69 08 29 02; Fax:01.69.08.77.16

 

 --
 View this message in context: Re: colorbllind 
 problemhttp://matplotlib.1069221.n5.nabble.com/colorbllind-problem-tp42884p42886.html
 Sent from the matplotlib - users mailing list 
 archivehttp://matplotlib.1069221.n5.nabble.com/matplotlib-users-f3.htmlat 
 Nabble.com.


 --
 Managing the Performance of Cloud-Based Applications
 Take advantage of what the Cloud has to offer - Avoid Common Pitfalls.
 Read the Whitepaper.

 http://pubads.g.doubleclick.net/gampad/clk?id=121054471iu=/4140/ostg.clktrk
 

Re: [Matplotlib-users] colorbllind problem

2014-02-17 Thread Paul Hobson
Untested, of course, but I would do something like this:

import matplotlib.pyplot as plt
import seaborn

N = len(As)

myPallette = seaborn.color_palette(skyblue, N)  # use the name of  any
mpl colormap here
seaborn.set_color_pallette(myPallette)

zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)
lotgr = plt.figure()
axius = lotgr.add_subplot(111)

for a1,b1,c1,d1,angol in zipPARA:
fittedval = spock(logeels, a1, b1, c1, d1)
angli = str(angol)
imig = axius.plot(logeels, fittedval, label=angli)

axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)
lotgr.canvas.draw()


On Mon, Feb 17, 2014 at 3:00 PM, Gabriele Brambilla 
gb.gabrielebrambi...@gmail.com wrote:

 Hi, I would like to set the color of the different plots with seaborn but
 I don't find examples of this kind on the tutorial.
 How could I modify this code? the zip() arguments are lists of the same
 dimension.

 zipPARA = zip(As, GAMMAs, EcutS, Bees, angles)

 lotgr = plt.figure()

 axius = lotgr.add_subplot(111)

 for a1,b1,c1,d1,angol in zipPARA:

 fittedval = spock(logeels, a1, b1, c1, d1)

 angli = str(angol)

 imig = axius.plot(logeels, fittedval, label=angli)

 axius.legend(bbox_to_anchor=(1.05, 1), loc=9, borderaxespad=0.)

 lotgr.canvas.draw()

 thanks

 Gabriele


 2014-02-17 14:46 GMT-05:00 Paul Hobson pmhob...@gmail.com:

 Adam,

 Look into the seaborn project:

 http://nbviewer.ipython.org/github/mwaskom/seaborn/blob/master/examples/aesthetics.ipynb

 it's easy enough to define your own color palettes or select existing
 ones.
 -paul


 On Mon, Feb 17, 2014 at 11:41 AM, Adam Hughes hughesada...@gmail.comwrote:

 I'm wondering if the matplotlib API is designed in such a way that
 choosing a color schema could be done at import time.  I know that the
 entire plot style can be changed in one call (eg put plt.xkcd() at the
 beginning of your code), so I wander if colorblind-compatible colors could
 be loaded in a similar, quick way.


 On Mon, Feb 17, 2014 at 1:52 PM, ChaoYue chaoyue...@gmail.com wrote:

 Hi Gabriele,

 I'm afraid you have to put the numbers by yourself using the plt.text,
 as in an example:
 a = np.arange(10)
 b = np.tile(a,(10,1))
 c = np.tile(a[:,np.newaxis],(10)) + b
 plot(c)
 for i in range(10):
 plt.text(5,c[i][5],str(i))


 I've askd by a review to use the colorblind compatible colors when
 trying to submit a paper,
 and I find a website below:
 http://jfly.iam.u-tokyo.ac.jp/color/

 I put some RGB numbers for some colors here if you feel like to have a
 try:
 CCC =
 {

 'Black':np.array([0,0,0])/255.,

 'Orange':np.array([230,159,0])/255.,

 'Skyblue':np.array([85,180,233])/255.,

 'BluishGreen':np.array([0,158,115])/255.,

 'Yellow':np.array([240,228,66])/255.,

 'Blue':np.array([0,114,178])/255.,

 'Vermilion':np.array([213,94,0])/255.,

 'ReddishPurple':np.array([204,121,167])/255.
}

 Cheers,

 Chao



 On Mon, Feb 17, 2014 at 7:17 PM, Gabriele Brambilla [via matplotlib] 
 [hidden
 email] http://user/SendEmail.jtp?type=nodenode=42886i=0 wrote:

 Hi,
 I'm dealing with a guy that is colorblind.
 Have you got any suggestion on how could I show a plot like the one
 attached to him?
 Is there an option in pyplot that write little numbers near the curves
 instead of colors?

 thanks

 Gabriele

 --

 Managing the Performance of Cloud-Based Applications
 Take advantage of what the Cloud has to offer - Avoid Common Pitfalls.
 Read the Whitepaper.

 http://pubads.g.doubleclick.net/gampad/clk?id=121054471iu=/4140/ostg.clktrk
 ___
 Matplotlib-users mailing list
 [hidden email] http://user/SendEmail.jtp?type=nodenode=42884i=0
 https://lists.sourceforge.net/lists/listinfo/matplotlib-users

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 --

 ***
 Chao YUE
 Laboratoire des Sciences du Climat et de l'Environnement (LSCE-IPSL)
 UMR 1572 CEA-CNRS-UVSQ
 Batiment 712 - Pe 119
 91191 GIF Sur YVETTE Cedex
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