Re: [Matplotlib-users] import error with Basemap
> Timmie: It's possible that the windows installer is missing the httplib2 > module - I don't have access to windows right now to check. Could you > try installing httplib2 and let me know if that fixes it? Installing httplib2 solved the issue. Has this dependancy on httplib2 been introduced in the last update? What are the merits of this dependency? Could it be made option? Like that I would only need to have httplib2 if I use functions that load maps from the web? Kind regards and thanks for your efforts in developing basemap! Timmie - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
[Matplotlib-users] Subplots from existing figures
Hello, I have some functions that produce various figures. This is usually done by calling figure(), then the plot function (eg bar). I save the figure object and pass it out. I would like to be able to collect several figure objects from such functions and collect them as subplots in a single figure for easy printing, comparison. I don't want to change the functions that create them though, because I will also want to view them individually in the future. So given a load of figure objects, how can I make a new figure with each subplot one of the existing figures? (I hope this is clear). Does it matter if the original figure object has been closed? I'm having a look through the help to see if I could find it but it's taking a bit of time and I thought it's probably quite easy if your more familiar with the object structure of matplotlib. Thanks Robin - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] import error with Basemap
Tim Michelsen wrote: >> Timmie: It's possible that the windows installer is missing the httplib2 >> module - I don't have access to windows right now to check. Could you >> try installing httplib2 and let me know if that fixes it? >> > Installing httplib2 solved the issue. > > Has this dependancy on httplib2 been introduced in the last update? > Timmie: No, it has been there for a few releases, but for some reason did not get included in the windows installer this time. > What are the merits of this dependency? > Could it be made option? > If you install from source, it only installs httplib2 if you don't have it already. > Like that I would only need to have httplib2 if I use functions that load maps > from the web? > > I could do this, but it's only a single python file, so what's the big deal? > Kind regards and thanks for your efforts in developing basemap! > > Timmie > You're welcome. -Jeff -- Jeffrey S. Whitaker Phone : (303)497-6313 NOAA/OAR/CDC R/PSD1FAX : (303)497-6449 325 BroadwayBoulder, CO, USA 80305-3328 - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
[Matplotlib-users] Best installation procedure for MacOSX
Hi! Some colleagues are starting to use python, matplotlib et al. for data analysis and so on. However, they are using MacOSX computers, and neither of us are particularly proficient in the use of OSX. I would like to know if there's an easy way to install ipython, numpy, scipy and matplotlib on MacOSX 10.4 without much hassle. Is there some "officially sanctioned" :D best way? Cheers! Josea - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Backend Agg - problem!
On Thu, 14 Feb 2008, John Hunter apparently wrote:
> if we want the script to be robust in the presence of
> different use directives, eg matplotlib.use('TkAgg') then
> it is good to have the show in there.
Got it.
So ``show`` is a no-op with irrelevant backends.
Just to repeat:
the documentation link for ``show`` is dead.
Dead link: http://matplotlib.sourceforge.net/matplotlib.pyplot.html#-show
Link location: http://matplotlib.sourceforge.net/
Thanks.
Alan
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Re: [Matplotlib-users] Best installation procedure for MacOSX
José, I would take a look at the Scipy Superpack (http://trichech.us/). Alternatively, you can download and install the MacPython 2.5 for OS X 10.4 (http://www.pythonmac.org/packages/py25-fat/index.html). This installs a separate Python framework (leaving the system python framework unchanged). The installer will modify your path to point to the new python2.5. You can then install setuptools/ipython/numpy/scipy/matplotlib from source or via EasyInstall. If you go this route, you'll probably also want the wxPython installer from http://www.wxpython.org/download.php#binaries. Feel free to contact me directly if you have any other questions. Barry On Feb 15, 2008 6:23 AM, José Gómez-Dans <[EMAIL PROTECTED]> wrote: > Hi! > Some colleagues are starting to use python, matplotlib et al. for data > analysis and so on. However, they are using MacOSX computers, and neither of > us are particularly proficient in the use of OSX. I would like to know if > there's an easy way to install ipython, numpy, scipy and matplotlib on MacOSX > 10.4 without much hassle. Is there some "officially sanctioned" :D best way? > > Cheers! > Josea > > - > This SF.net email is sponsored by: Microsoft > Defy all challenges. Microsoft(R) Visual Studio 2008. > http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ > ___ > Matplotlib-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/matplotlib-users > - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Best installation procedure for MacOSX
Barry Wark wrote: > I'm ramping up to start building at least scipy binaries (see recent > post on scipy-users list). I'm just waiting for tester feedback for > eggs built from SVN trunk. They're currently for OS X 10.5, but I will > also build for MacPython once I'm sure everything's working. Great, thanks! > numpy, ipython, and matplotlib all apear to be available via > EasyInstall, so scipy seems to be the only missing piece. well, it's the hard one, as it requires Fortran. Adding to my last note: Another reason pythonmac.org/packages isn't getting the unmaintained it used to is the easy-install works for so many things. I think it's working fine for MPL now, for instance. -Chris -- Christopher Barker, Ph.D. Oceanographer Emergency Response Division NOAA/NOS/OR&R(206) 526-6959 voice 7600 Sand Point Way NE (206) 526-6329 fax Seattle, WA 98115 (206) 526-6317 main reception [EMAIL PROTECTED] - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Fail to allocate bitmap, Unable to free colormap, palette is still selected.
hi Mike,
It only prints what is between the , - . I tend to think it is
related to Tkinter.
I'm using the default GTKAgg.
I have generated over 1500 images using the simple example with no
issue. When it is in the larger app, it fails on the 2nd or 3rd request.
I'm trying
reload(matplotlib)
matplotlib.use('TkAgg')
Are there some python flags I can use when running the script to get
more verbose output? I've used -v and -d and get the cleanup list, is
that useful?
thanks
Michael Droettboom wrote:
> Can you provide the full traceback for the error? Are there no Python
> line numbers etc.?
>
> I don't see the string "Fail to allocate bitmap" or "Unable to free
> colormap..." anywhere in the matplotlib source, so it's hard to say
> where it's coming from. I suspect they are coming from the GUI
> framework you are using...
>
> If you put your simple example inside of a loop, does the error
> eventually occur -- or only within the context of your app? If the
> latter, we'll need to somehow narrow it down to a specific setting or
> method that causes the problem.
>
> Also, what backend are you using when it breaks? Just Agg, or one of
> the Gui+Agg backends?
>
> Cheers,
> Mike
>
> Chris Kennedy wrote:
>> hi,
>> I get this error when I'm generating numerous .png files using
>> matplotlib 0.9.2 in py2.4 on WinXP
>> -
>> Fail to allocate bitmap
>>
>> This application has requested the Runtime to terminate it in an
>> unusual way.
>> Please contact the application's support team for more information.
>> Unable to free colormap, palette is still selected.
>>
>> This application has requested the Runtime to terminate it in an
>> unusual way.
>> Please contact the application's support team for more information.
>> -
>>
>> The code is simple:
>> import matplotlib
>> import matplotlib.pyplot as pylab
>>
>> pylabFigure = pylab.figure()
>> pylabFigure.clf()
>> pylab.rcdefaults()
>> pylab.plot(p[0::2], p[1::2], 'b-', linewidth=3)
>> pylab.title('Endpointing Plot for '+StepMillName)
>> pylab.xlabel('Mill Distance ('+m_unit+')')
>> pylab.ylabel('~ Electron response ~' )
>> pylab.grid(True)
>> pylabFigure.savefig('EPP_'+StepMillName+'.png',
>> facecolor='lightgrey', edgecolor='w')
>> pylab.close('all')
>> pylabFigure = None
>>
>> I can put this code in a simple program and generate many images
>> without seeing the allocate bitmap error.
>>
>> Perhaps it is colliding with something else in my main app. Is there
>> a command that can clear, flush, or unselect the palette and/or
>> colormap?
>>
>> I don't see the allocate error if I switch the backend to 'SVG', that
>> has it own set of issues though: telling me it can't use, but then
>> generating SVG files anyway.
>>
>> thanks
>>
>
--
Chris Kennedy http://www.coventor.com
Sr. Product ManagerPh: 919-854-7500 x156
Cary, NC Fx: 919-854-7501
Mobile: 919-414-6653
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Re: [Matplotlib-users] Fail to allocate bitmap, Unable to free colormap, palette is still selected.
Can you provide the full traceback for the error? Are there no Python
line numbers etc.?
I don't see the string "Fail to allocate bitmap" or "Unable to free
colormap..." anywhere in the matplotlib source, so it's hard to say
where it's coming from. I suspect they are coming from the GUI
framework you are using...
If you put your simple example inside of a loop, does the error
eventually occur -- or only within the context of your app? If the
latter, we'll need to somehow narrow it down to a specific setting or
method that causes the problem.
Also, what backend are you using when it breaks? Just Agg, or one of
the Gui+Agg backends?
Cheers,
Mike
Chris Kennedy wrote:
> hi,
> I get this error when I'm generating numerous .png files using
> matplotlib 0.9.2 in py2.4 on WinXP
> -
> Fail to allocate bitmap
>
> This application has requested the Runtime to terminate it in an unusual
> way.
> Please contact the application's support team for more information.
> Unable to free colormap, palette is still selected.
>
> This application has requested the Runtime to terminate it in an unusual
> way.
> Please contact the application's support team for more information.
> -
>
> The code is simple:
> import matplotlib
> import matplotlib.pyplot as pylab
>
> pylabFigure = pylab.figure()
> pylabFigure.clf()
> pylab.rcdefaults()
> pylab.plot(p[0::2], p[1::2], 'b-', linewidth=3)
> pylab.title('Endpointing Plot for '+StepMillName)
> pylab.xlabel('Mill Distance ('+m_unit+')')
> pylab.ylabel('~ Electron response ~' )
> pylab.grid(True)
> pylabFigure.savefig('EPP_'+StepMillName+'.png',
> facecolor='lightgrey', edgecolor='w')
> pylab.close('all')
> pylabFigure = None
>
> I can put this code in a simple program and generate many images without
> seeing the allocate bitmap error.
>
> Perhaps it is colliding with something else in my main app. Is there a
> command that can clear, flush, or unselect the palette and/or colormap?
>
> I don't see the allocate error if I switch the backend to 'SVG', that
> has it own set of issues though: telling me it can't use, but then
> generating SVG files anyway.
>
> thanks
>
--
Michael Droettboom
Science Software Branch
Operations and Engineering Division
Space Telescope Science Institute
Operated by AURA for NASA
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Re: [Matplotlib-users] Best installation procedure for MacOSX
Barry Wark wrote: > I would take a look at the Scipy Superpack (http://trichech.us/). only support Intel and it seems only 10.5 -- darn. scipy can now be built Universal, so hope someone will start distributing a Universal binary some day. > Alternatively, you can download and install the MacPython 2.5 for OS X > 10.4 (http://www.pythonmac.org/packages/py25-fat/index.html). There are also a bunch of other packages there, including wxPython, and an older MPL. The idea was that the pythonmac site would be the "official" place to get binaries of python packages for OS-X. However, we don't always get stuff contributed, and it can be a bit tricky for folks to build a complex package that meets its specs (Universal is the big issue), so folks build stuff like the "Superpack" that is almost there. I don't have time to try to do it now, but PLEASE, someone build a recent scipy and/or MPL and put it up there! -Chris -- Christopher Barker, Ph.D. Oceanographer Emergency Response Division NOAA/NOS/OR&R(206) 526-6959 voice 7600 Sand Point Way NE (206) 526-6329 fax Seattle, WA 98115 (206) 526-6317 main reception [EMAIL PROTECTED] - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
[Matplotlib-users] Fail to allocate bitmap, Unable to free colormap, palette is still selected.
hi,
I get this error when I'm generating numerous .png files using
matplotlib 0.9.2 in py2.4 on WinXP
-
Fail to allocate bitmap
This application has requested the Runtime to terminate it in an unusual
way.
Please contact the application's support team for more information.
Unable to free colormap, palette is still selected.
This application has requested the Runtime to terminate it in an unusual
way.
Please contact the application's support team for more information.
-
The code is simple:
import matplotlib
import matplotlib.pyplot as pylab
pylabFigure = pylab.figure()
pylabFigure.clf()
pylab.rcdefaults()
pylab.plot(p[0::2], p[1::2], 'b-', linewidth=3)
pylab.title('Endpointing Plot for '+StepMillName)
pylab.xlabel('Mill Distance ('+m_unit+')')
pylab.ylabel('~ Electron response ~' )
pylab.grid(True)
pylabFigure.savefig('EPP_'+StepMillName+'.png',
facecolor='lightgrey', edgecolor='w')
pylab.close('all')
pylabFigure = None
I can put this code in a simple program and generate many images without
seeing the allocate bitmap error.
Perhaps it is colliding with something else in my main app. Is there a
command that can clear, flush, or unselect the palette and/or colormap?
I don't see the allocate error if I switch the backend to 'SVG', that
has it own set of issues though: telling me it can't use, but then
generating SVG files anyway.
thanks
--
Chris Kennedy http://www.coventor.com
Sr. Product ManagerPh: 919-854-7500 x156
Cary, NC
-
This SF.net email is sponsored by: Microsoft
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Re: [Matplotlib-users] Best installation procedure for MacOSX
I'm ramping up to start building at least scipy binaries (see recent post on scipy-users list). I'm just waiting for tester feedback for eggs built from SVN trunk. They're currently for OS X 10.5, but I will also build for MacPython once I'm sure everything's working. numpy, ipython, and matplotlib all apear to be available via EasyInstall, so scipy seems to be the only missing piece. barry On Feb 15, 2008 12:41 PM, Christopher Barker <[EMAIL PROTECTED]> wrote: > > Barry Wark wrote: > > I would take a look at the Scipy Superpack (http://trichech.us/). > > only support Intel and it seems only 10.5 -- darn. > > scipy can now be built Universal, so hope someone will start > distributing a Universal binary some day. > > > Alternatively, you can download and install the MacPython 2.5 for OS X > > 10.4 (http://www.pythonmac.org/packages/py25-fat/index.html). > > There are also a bunch of other packages there, including wxPython, and > an older MPL. > > The idea was that the pythonmac site would be the "official" place to > get binaries of python packages for OS-X. However, we don't always get > stuff contributed, and it can be a bit tricky for folks to build a > complex package that meets its specs (Universal is the big issue), so > folks build stuff like the "Superpack" that is almost there. > > I don't have time to try to do it now, but PLEASE, someone build a > recent scipy and/or MPL and put it up there! > > -Chris > > > -- > Christopher Barker, Ph.D. > Oceanographer > > Emergency Response Division > NOAA/NOS/OR&R(206) 526-6959 voice > 7600 Sand Point Way NE (206) 526-6329 fax > Seattle, WA 98115 (206) 526-6317 main reception > > [EMAIL PROTECTED] > > > - > This SF.net email is sponsored by: Microsoft > Defy all challenges. Microsoft(R) Visual Studio 2008. > http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ > ___ > Matplotlib-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/matplotlib-users > - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Best installation procedure for MacOSX
On Feb 15, 2008 1:27 PM, Christopher Barker <[EMAIL PROTECTED]> wrote: > Barry Wark wrote: > > I'm ramping up to start building at least scipy binaries (see recent > > post on scipy-users list). I'm just waiting for tester feedback for > > eggs built from SVN trunk. They're currently for OS X 10.5, but I will > > also build for MacPython once I'm sure everything's working. > > Great, thanks! > > > numpy, ipython, and matplotlib all apear to be available via > > EasyInstall, so scipy seems to be the only missing piece. > > well, it's the hard one, as it requires Fortran. > > Adding to my last note: > > Another reason pythonmac.org/packages isn't getting the unmaintained it > used to is the easy-install works for so many things. I think it's > working fine for MPL now, for instance. Right. Since Leopard comes with setuptools, it seems like the mac-python community is being pushed towards using setuptools/EasyInstall instead of mpkg installers. I personally think that's a good thing. - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
Re: [Matplotlib-users] Fail to allocate bitmap, Unable to free colormap, palette is still selected.
hi Mike,
I was able to get it to work using:
reload(matplotlib)
matplotlib.use('Agg')
I'll have to beat on it some more to see if this is robust.
I saw the error message in this code:
http://search.cpan.org/src/NI-S/Tk-804.027/pTk/mTk/win/tkWinDraw.c
if(!bitmap) {
panic("Fail to allocate bitmap\n");
DeleteDC(dcMem);
TkWinReleaseDrawableDC(d, dc, &state);
return;
}
thanks
Michael Droettboom wrote:
> Can you provide the full traceback for the error? Are there no Python
> line numbers etc.?
>
> I don't see the string "Fail to allocate bitmap" or "Unable to free
> colormap..." anywhere in the matplotlib source, so it's hard to say
> where it's coming from. I suspect they are coming from the GUI
> framework you are using...
>
> If you put your simple example inside of a loop, does the error
> eventually occur -- or only within the context of your app? If the
> latter, we'll need to somehow narrow it down to a specific setting or
> method that causes the problem.
>
> Also, what backend are you using when it breaks? Just Agg, or one of
> the Gui+Agg backends?
>
> Cheers,
> Mike
>
> Chris Kennedy wrote:
>> hi,
>> I get this error when I'm generating numerous .png files using
>> matplotlib 0.9.2 in py2.4 on WinXP
>> -
>> Fail to allocate bitmap
>>
>> This application has requested the Runtime to terminate it in an
>> unusual way.
>> Please contact the application's support team for more information.
>> Unable to free colormap, palette is still selected.
>>
>> This application has requested the Runtime to terminate it in an
>> unusual way.
>> Please contact the application's support team for more information.
>> -
>>
>> The code is simple:
>> import matplotlib
>> import matplotlib.pyplot as pylab
>>
>> pylabFigure = pylab.figure()
>> pylabFigure.clf()
>> pylab.rcdefaults()
>> pylab.plot(p[0::2], p[1::2], 'b-', linewidth=3)
>> pylab.title('Endpointing Plot for '+StepMillName)
>> pylab.xlabel('Mill Distance ('+m_unit+')')
>> pylab.ylabel('~ Electron response ~' )
>> pylab.grid(True)
>> pylabFigure.savefig('EPP_'+StepMillName+'.png',
>> facecolor='lightgrey', edgecolor='w')
>> pylab.close('all')
>> pylabFigure = None
>>
>> I can put this code in a simple program and generate many images
>> without seeing the allocate bitmap error.
>>
>> Perhaps it is colliding with something else in my main app. Is there
>> a command that can clear, flush, or unselect the palette and/or
>> colormap?
>>
>> I don't see the allocate error if I switch the backend to 'SVG', that
>> has it own set of issues though: telling me it can't use, but then
>> generating SVG files anyway.
>>
>> thanks
>>
>
--
Chris Kennedy http://www.coventor.com
Sr. Product ManagerPh: 919-854-7500 x156
Cary, NC
-
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Re: [Matplotlib-users] Fail to allocate bitmap, Unable to free colormap, palette is still selected.
On Fri, Feb 15, 2008 at 4:07 PM, Chris Kennedy
<[EMAIL PROTECTED]> wrote:
> hi Mike,
> It only prints what is between the , - . I tend to think it is
> related to Tkinter.
>
> I'm using the default GTKAgg.
>
> I have generated over 1500 images using the simple example with no
> issue. When it is in the larger app, it fails on the 2nd or 3rd request.
>
> I'm trying
> reload(matplotlib)
> matplotlib.use('TkAgg')
>
There seems to be some deep confusion here. You say you are using the
default GTKAgg, but then try "reload" (suggesting an interactive
session) and then call matplotlib.use('TkAgg') (which is never
appropriate when using TkAgg. Pleas explain to us a little more
clearly what you are trying to do: are you embedding matplotlib in a
UI, if so which on? Are you using it interactively from the python
shell (if so, which one?)
Note that if you are trying to build an app, as you suggest, ie embed
matplotlib in a GUI, you should not be using pylab at all. You should
follow the lead of examples/embedding_in_YOURGUI*.py , eg those at
http://matplotlib.sf.net/examples
JDH
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Re: [Matplotlib-users] automatically choose line markers/styles?
On Thu, 14 Feb 2008, Neal Becker apparently wrote: > Can I get nice default line styles and markers, > automatically set up with matching legend? Automatically > chosen? I don't want to have to go through and manually > choose each marker and line style. Well, you have to ask for a legend, but everything else default looks good to me. What is an example where you do not like the default behavior? Are you trying to make a bunch of figures look alike? Cheers, Alan Isaac - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Matplotlib-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/matplotlib-users
