Re: [Matplotlib-users] open ascii grid data and plot

2012-03-01 Thread Jean-Baptiste Marquette

Le 29 févr. 2012 à 23:29, questions anon a écrit :

> I have a txt file (with an associated prj file) containing gridded weather 
> data.
> Firstly how can I open this file and convert it to a numpy array?

You should have a look on ATpy package : http://atpy.github.com/

Cheers
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Re: [Matplotlib-users] matplotlib hanging on Mac OS 10.7 with Python 2.7.2 EPD 7.2-2 (64-bit)

2012-03-02 Thread Jean-Baptiste Marquette

Aloha Eric,

> This appears to be very much a dueling event loop problem.  My guess is 
> that the solution will have to be something that keeps the event loops 
> well separated, probably in separate processes.  All interaction with 
> your Client event loop would be in one process, and the callback would 
> get your data and put it somewhere (e.g. in a numpy npz file). Then the 
> trick is to have the matplotlib process in a polling loop using a timer 
> (done crudely with plt.pause(0.1); there is probably a better way) 
> checking to see if that "somewhere" has been updated, and if so, 
> updating its plot.

I feel I see the light at the end of the tunnel. The npz file is even not 
necessary, I just need to pass the star id to a separate plotting process, to 
be compared to some stored previous value, in order to refresh the plot.
I have to think about it for a couple of days…

Thanks for the suggestion,
Cheers,
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[Matplotlib-users] import problem (matplotlib ? numpy ?) on Mac Intel, python 2.6

2011-05-16 Thread Jean-Baptiste Marquette
Dear matplotlib/numpy gurus,

This is my first attempt to use matplotlib & numpy, with the following small 
piece of code:

#!/usr/bin/env jython    jython because of the import of stilts from 
starjava 

# Fabrique les figures des champs du papier Catalogue


__author__="marquett"
__date__ ="$16 mai 2011 12:17:08$"

import sys
sys.path.append('/star/starjava/etc/ttools')
sys.path.append('/Library/Frameworks/Python.framework//Versions/2.6/lib/python2.6/site-packages')
import stilts
import glob
import matplotlib.pyplot as plt

I got the following trace:

Traceback (most recent call last):
  File "/Users/marquett/Downloads/FigCat/src/figcat.py", line 14, in 
import matplotlib.pyplot as plt
  File 
"/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/__init__.py",
 line 135, in 
from matplotlib.rcsetup import (defaultParams,
  File 
"/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/rcsetup.py",
 line 19, in 
from matplotlib.colors import is_color_like
  File 
"/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colors.py",
 line 52, in 
import numpy as np
  File 
"/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/__init__.py",
 line 137, in 
import add_newdocs
  File 
"/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/add_newdocs.py",
 line 9, in 
from numpy.lib import add_newdoc
  File 
"/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/lib/__init__.py",
 line 4, in 
from type_check import *
  File 
"/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/lib/type_check.py",
 line 8, in 
import numpy.core.numeric as _nx
  File 
"/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/core/__init__.py",
 line 5, in 
import multiarray
ImportError: No module named multiarray

I use the latest 1.6.0 version of numpy and 1.0.0 one of matplotlib.

My so little experience tells me that this is a deep numpy issue rather than a 
matplotlib one.

Any hint welcome, thanks.

JB Marquette

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Re: [Matplotlib-users] [AstroPy] import problem (matplotlib ? numpy ?) on Mac Intel, python 2.6

2011-05-16 Thread Jean-Baptiste Marquette

Hi Thomas,

AtPy looks great. My only concern with starjava was to use stilts 
functionalities for managing ascii tables and coordinates transformations from 
degrees to sexagesimal and reverse. But I guess that AtPy deals with headers 
having a leading "#" and names of columns, like

# idra_min   ra_max dec_min  dec_max

and that pywcs can do transformations. So I can switch to pure python scripts.

Cheers,
JB


> Hi Jean-Baptiste,
> 
> I don't think numpy is currently supported by Jython.
> 
> I do not know exactly what is your use of starjava, but you might want to 
> have a look at AtPy (http://atpy.github.com/) which does a pretty good job at 
> manipulating (astronomical) tables.
> 
> Cheers,
> 
> Thomas Boch
> 
> On 16/05/11 17:02, Jean-Baptiste Marquette wrote:
>> 
>> Dear matplotlib/numpy gurus,
>> 
>> This is my first attempt to use matplotlib & numpy, with the following small 
>> piece of code:
>> 
>> #!/usr/bin/env jython    jython because of the import of stilts from 
>> starjava 
>> 
>> # Fabrique les figures des champs du papier Catalogue
>> 
>> 
>> __author__="marquett"
>> __date__ ="$16 mai 2011 12:17:08$"
>> 
>> import sys
>> sys.path.append('/star/starjava/etc/ttools')
>> sys.path.append('/Library/Frameworks/Python.framework//Versions/2.6/lib/python2.6/site-packages')
>> import stilts
>> import glob
>> import matplotlib.pyplot as plt
>> 
>> I got the following trace:
>> 
>> Traceback (most recent call last):
>>   File "/Users/marquett/Downloads/FigCat/src/figcat.py", line 14, in 
>> import matplotlib.pyplot as plt
>>   File 
>> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/__init__.py",
>>  line 135, in 
>> from matplotlib.rcsetup import (defaultParams,
>>   File 
>> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/rcsetup.py",
>>  line 19, in 
>> from matplotlib.colors import is_color_like
>>   File 
>> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colors.py",
>>  line 52, in 
>> import numpy as np
>>   File 
>> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/__init__.py",
>>  line 137, in 
>> import add_newdocs
>>   File 
>> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/add_newdocs.py",
>>  line 9, in 
>> from numpy.lib import add_newdoc
>>   File 
>> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/lib/__init__.py",
>>  line 4, in 
>> from type_check import *
>>   File 
>> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/lib/type_check.py",
>>  line 8, in 
>> import numpy.core.numeric as _nx
>>   File 
>> "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/core/__init__.py",
>>  line 5, in 
>> import multiarray
>> ImportError: No module named multiarray
>> 
>> I use the latest 1.6.0 version of numpy and 1.0.0 one of matplotlib.
>> 
>> My so little experience tells me that this is a deep numpy issue rather than 
>> a matplotlib one.
>> 
>> Any hint welcome, thanks.
>> 
>> JB Marquette
>> 
>> 
>> ___
>> AstroPy mailing list
>> astr...@scipy.org
>> http://mail.scipy.org/mailman/listinfo/astropy
> 
> 
> -- 
> Thomas Boch
>   CDS/Observatoire Astronomique   Phone  : 33 (0)3 68 85 24 42
>   11, rue de l'Universite Fax: 33 (0)3 68 85 24 17
>   F-67000 Strasbourg  Email  : thomas.b...@astro.unistra.fr
>   France  http://cdsweb.u-strasbg.fr/~boch


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