an archetype for a home-based device composition

2007-07-19 Thread Andrew Patterson
The openehr spec details how COMPOSITION's can occur
without any event_context for the case of home
monitoring devices etc. I am in a situation where I will be
constructing compositions along these lines, but now I
need an archetype that corresponds to such a
composition.

Has any standard approach to this been considered in
the NHS work? It's essentially a pretty empty archetype
- so I'm sure I could knock one up - but would defer to
those with more experience in this area if someone
already has a plan for a standard archetype along
these lines.

Andrew



Data quality questions/ proposal

2007-07-19 Thread KOBAYASHI, Shinji
Dear all,

When I was a student, I presented a physical examination of a case for
the professor. The professor asked me, Did you really see the patient
eye? While I presented that the patient's palpebral conjunctivae was
not anemic, the professor had the laboratory data that his hemoglobin is
7g/dl. The professor also said Don't you think physical examination is
irrelevant. It is true that you feel he is not anemic, but laboratory
data is not so. Our clinical decision was confirmed beyond such
discrepancy through many data,
Tha subjective data are sometimes irelevant and obvious, but it is just
real for the data taker at that time. Although it is important to
evaluate the acuracy of such data, the evaluation is also subjective and
obvious. For clinical decision making, I always remarks the production
process of the data, how the data was bringed up for me, who made the
data, and when mede the data. For example, the data made by a resident
has less prior than the data made by expert.

On Sun, 15 Jul 2007 11:04:36 -0400
William E Hammond hammo001 at mc.duke.edu wrote:

 Stef,
 
 I would like to share your e-mail with ACMi to see what responses we get.
 It is an interesting proposition.  Question, why not just require
 excellent/good measurement?
 
 Ed Hammond
 
 

  Stef Verlinden
  stef at vivici.nl  
  Sent by:   To 
  openehr-clinical- For openEHR clinical discussions
  bounces at openehr.o openehr-clinical at openehr.org   

  rg cc 

Subject 
  07/10/2007 05:41  Data quality questions/ proposal
  AM


  Please respond to 
 For openEHR
  clinical  
 discussions
  openehr-clinical 
@openehr.org   


 
 
 
 
 One of the major requirements we have is what I call a ?data quality
 marker?. So the blood pressure recorded is 88/124 but what is the ?value/
 quality? of this measurement.
 IMHO any recorded value is useless unless the quality of this measurement
 can be established and taken into account when interpreting the data
 
 In order to establish this data quality we need to add some attributes to
 the observation archetypes used to record such measurement.
 
 So far as we can see now we think that these attributes are a data quality
 field and a device/instrument reference (which requires a device archetype)
 and this is what we would like to propose to the community.
 
 Since I don?t know exactly how to do that and we still have many unanswered
 questions I?ll describe what we?re thinking about. It?s very well possible
 that these thing are already in place, in that case we?re aren?t aware of
 that and would like to be pointed in the right direction.
 
 In our ?model? data quality can be described as: excellent, good, doubtful
 and insufficient.
 
 Here the first hurdle arises: one needs a protocol to define what is
 excellent, good etc. These are probably ?local? criteria, so the can?t be
 embedded in a general archetype.
 Our idea is to create a specialisation of the observation archetype in
 question, in which the local protocol is attached. For instance this blood
 pressure archetype with the local Dutch data quality criteria would be
 openEHR-EHR-OBSERVATION.blood_pressure-data_qualityNL.v1.adl
 
 To give an example these are the criteria for blood pressure we?re thinking
 off:
 
 Excellent:
 data measured/obtained by a qualified healthcare provider, with a certified
 instrument/device that?s calibrated against a ?golden standard?, the
 measurement error is within a tight bandwidth (5%), the validity duration
 of the calibration isn?t expired, maintained on time and by qualified
 personal
 (This can?t be met when self-measuring in the home situation)
 
 Good:
 data measured/obtained by a qualified person (this can also be a properly
 trained 

an archetype for a home-based device composition

2007-07-19 Thread Sam Heard
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Data quality questions/ proposal

2007-07-19 Thread Dipak Kalra
Dear Tom,

The purpose of the flag is not to tell you anything about the  
uncertainty within an ENTRY, but only to tell you that it needs to be  
reviewed as a whole by a person or process capable of reviewing it.  
It is not the case that all you have is a flag, but rather that you  
have a flag in addition to the contents to warn you that extracting a  
single part of this ENTRY such as an ELEMENT value through a query  
might not be safe because some other parts of the ENTRY might be  
indicating that there is a caveat or caution about the value's  
interpretation. The ENTRY contents still need to provide the  
appropriate details to inform the reviewer, as captured by the  
original author.

It would be nice if we could be more clever than that, but the  
complexity of this challenge is such that a single unambiguous and  
consistently used representation of each kind of uncertainty or  
caution is not yet feasible (as we all know).

What we found to be appropriate for the standard is to put a label on  
the box to say open with caution, don't just drill down blindly and  
pluck out an isolated value. This is by no means a perfect solution  
but reflects the extent of confidence in the field at present, and  
what current systems vendors felt could be handled in the near future.

With best wishes,

Dipak

Dr Dipak Kalra
Clinical Senior Lecturer in Health Informatics
CHIME, University College London
Holborn Union Building, Highgate Hill, London N19 5LW
Phone: +44-20-7288-5966
Fax: +44-20-7288-3322
Web site: http://www.chime.ucl.ac.uk






Microsoft/NHS common health interface and openEHR datatypes

2007-07-19 Thread Meyer, Gunther
Hi Sam and Thomas and others!

Just a quick followup - a while ago you mentioned that you were thinking
of uploading your Microsoft code to the openEHR website.

Are you still considering doing this? I would absolutely like to see
what you have done. Even if you could only upload a few samples to
illustrate what is working well, and what areas are not working so well,
that would be excellent.

Regards

Gunther

-Original Message-
From: openehr-clinical-boun...@openehr.org
[mailto:openehr-clinical-bounces at openehr.org] On Behalf Of Thomas Beale
Sent: Thursday, July 19, 2007 4:48 AM
To: For openEHR clinical discussions
Subject: Re: Microsoft/NHS common health interface and openEHR datatypes

Grahame Grieve wrote:
 I'm a long way behind, and playing email catch up.

 just a technical clarification:

   last year - it is problematic, as it prevents you from using
well-known
   bits of other open source code, because it is primarily designed to
a)
   avoid encumbrance of the code by other licenses of any kind and b)
   ensure that changes to code in the Eclipse code base can be done
without
   reference to anyone else. We couldn't even use it for the openEHR
   (GPL'd) java kernel because the latter uses libraries that wouldn't
be
   allowed by the EPL. The EPL induction process is also painful - it
takes
   weeks/months to get your code 'reviewed' by Eclipse people to
certify it
   as 'unencumbered'...meanwhile it will have changed..

 I don't think (a) is a property of the EPL license itself. But
 it is certainly exactly how the Eclipse Foundation vets code
 that will be posted to the official eclipse cvs.
   
I'm not trying to be critical as such - its just that Rong found code 
that we would be prevented from using if we converted the license to
EPL.

In the end, I don't think I am really convinced by the need to have a 
special license for the Eclipse project; there are clearly some license 
that the code can't use, but it seems unrealistic to me to try and make 
it one. But prepared to be shown the light

- thomas


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Microsoft/NHS common health interface and openEHR datatypes

2007-07-19 Thread Grahame Grieve

 I don't think (a) is a property of the EPL license itself. But
 it is certainly exactly how the Eclipse Foundation vets code
 that will be posted to the official eclipse cvs.
   
 I'm not trying to be critical as such - its just that Rong found code 
 that we would be prevented from using if we converted the license to EPL.

yeah, this is not easy. (though as I said, it's not just converting
to EPL, it's subjecting to the full eclipse processes)

 In the end, I don't think I am really convinced by the need to have a 
 special license for the Eclipse project; there are clearly some license 
 that the code can't use, but it seems unrealistic to me to try and make 
 it one. But prepared to be shown the light


well, I look at it this way: eclipse is a reliable proposition for everyone:
no surprises. I doubt that we (kestral) could use the openEHR java kernel 
corporately
because of GPL issues. I do not have the skills or the time to find out exactly
what I can and cannot do without inadvertantly subjecting my corporate stuff to
GPL. But if I use eclipse code (not just EPL), I know that appropriately skilled
and highly motivated people have done this for me.

So for a project to become eclipse, and to actually mean putting the code
up on eclipse, it has to jump these hurdles. Why do this?

pros:
  - will increase target market of the code substantially. however, while in 
tools
market, the corporate benefits of eclipse in this regard are well 
recognised,
I don't think there's the same brand penetration in the healthcare sector 
regarding
Eclipse sanitising your code for you
  - will allow a full engagement between multiple communities, in particular, 
the
community that is growing around eclipse

cons:
  - have to jump the hurdle. It can be quite high and painful. The more mature 
the
project, the more painful, (and possibly the pros are reduced here too)


If I was you, I wouldn't be making the change right now either. I think that the
correlation of forces will change in the future, and then I will ask you to
re-evaluate.

In the meantime, we are pursuing alternate pathways that will enable community
collaboration with more flexibility about how the price is paid and when. There
should be public announcements soon.

Grahame



Antw: Re: Antw: RE: an archetype for a home-based device composition

2007-07-19 Thread williamtfgoos...@cs.com
In een bericht met de datum 19-7-2007 11:39:54 West-Europa (zomertijd), 
schrijft thomas.beale at OceanInformatics.biz:

I know, we will be going to work on that :-)

  Unfortunately it is all in Dutch.
 
 if this was in archetype form, translations could be accommodated 
 seamlessly. I am serious!
 
 - thomas beale


Sincerely yours,

dr. William TF Goossen
director 
Results 4 Care b.v.
De Stinse 15
3823 VM Amersfoort
email: Results4Care at cs.com
phone + 31654614458
fax +3133 2570169
Dutch Chamber of Commerce number: 32121206  /HTML
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an archetype for a home-based device composition

2007-07-19 Thread Laura Sato (NHS CFH)
.

NHSmail is used daily by over 100,000 staff in the NHS. Over a million
messages  are sent every day by the system.  To find  out why more and
more NHS personnel are  switching to  this NHS  Connecting  for Health
system please visit www.connectingforhealth.nhs.uk/nhsmail
**
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Data quality questions/ proposal

2007-07-19 Thread Thomas Beale

Dipak,

I should point out that I am not aiming for any heavy debate of this 
right now - it's been done before and is a serious topic. On the other 
hand we have all learned more in different areas over the last few 
years, so it's interesting to bring up a few points and see if anyone's 
thoughts have changed. I have mainly questions.

Dipak Kalra wrote:
 Dear Tom,

 The purpose of the flag is not to tell you anything about the  
 uncertainty within an ENTRY, but only to tell you that it needs to be  
 reviewed as a whole by a person or process capable of reviewing it.  
   
this is the question isn't it? What does 'reviewed' mean? If the 
information is credible (even if wrong) how can the reviewer tell, when 
there is no measure of how wrong?
 It is not the case that all you have is a flag, but rather that you  
 have a flag in addition to the contents to warn you that extracting a  
 single part of this ENTRY such as an ELEMENT value through a query  
 might not be safe because some other parts of the ENTRY might be  
 indicating that there is a caveat or caution about the value's  
 interpretation. The ENTRY contents still need to provide the  
 appropriate details to inform the reviewer, as captured by the  
 original author.
   
various questions come to mind:

* are you saying that any original representation of error etc is
  retained in the data?
* So the flag is really a marker on an Entry to say 'somewhere
  buried in here is/are one or more indicators of (in)accuracy'?
* What if all the Quantities have accuracy markers on them (is this
  possible with the CEN QTY data type?) - and the accuracies are
  e.g. +/- 5% (i..e pretty good) - do you set the flag or not?
* What if there were 50 quantities with high accuracy and one of low
  accuracy, does the flag get set or not?
* What if there are differential diagnoses indicating confidence
  levels?
* You wouldn't set the flag on this would you, since the information
  is 100% correctly representing what the physician said
* how hard would it be for software to set this flag?
* the ultimate question is: does this flag give you any more useful
  information than the raw data?

 ...or am I missing the point of this altogether?
 It would be nice if we could be more clever than that, but the  
 complexity of this challenge is such that a single unambiguous and  
 consistently used representation of each kind of uncertainty or  
 caution is not yet feasible (as we all know).

 What we found to be appropriate for the standard is to put a label on  
 the box to say open with caution, don't just drill down blindly and  
 pluck out an isolated value. 
how should software react to this?

- thomas





Antw: RE: an archetype for a home-based device composition

2007-07-19 Thread Stef Verlinden

Op 19-jul-2007, om 9:33 heeft Williamtfgoossen at cs.com het volgende  
geschreven:

 We are using the composisitions in HL7 format (13606-5  
 implementation version) based on the organiser class in HL7.

 We have individual items / simple scoring systems that are grouped  
 together with use of an organiser, where the organiser gets a  
 unique code.

 e.g. a code for vital signs, where the underlying data items are  
 temperature, blood pressure, breathing rate, pulse rate.

 this structure with organisers we have used a lot for home care /  
 community care / nursing home, especially for the acceptance to  
 care messaging.  E.g. for mobility, for risks, for daily living,  
 for living conditions, household, expectations of the future,  
 social situation, medical care, generic assessment, feeding, etc.

 Unfortunately it is all in Dutch.

Are these in some 'public' place? If possible I would like to see  
them and Dutch is no problem:-)

Cheers,


Stef


 William Goossen

 In een bericht met de datum 18-7-2007 17:29:21 West-Europa  
 (zomertijd), schrijft laura.sato at nhs.net:


 From: openehr-clinical-bounces at openehr.org
 [mailto:openehr-clinical-bounces at openehr.org] On Behalf Of Andrew  
 Patterson
 Sent: 18 July 2007 16:16
 To: For openEHR clinical discussions
 Subject: an archetype for a home-based device composition

 The openehr spec details how COMPOSITION's can occur without any
 event_context for the case of home monitoring devices etc. I am in a
 situation where I will be constructing compositions along these  
 lines, but
 now I need an archetype that corresponds to such a composition.

 Has any standard approach to this been considered in the NHS work?  
 It's
 essentially a pretty empty archetype
 - so I'm sure I could knock one up - but would defer to those with  
 more
 experience in this area if someone already has a plan for a standard
 archetype along these lines.

 Andrew
 ___
 openEHR-clinical mailing list
 openEHR-clinical at openehr.org
 http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-clinical



 Sincerely yours,

 dr. William TF Goossen
 director
 Results 4 Care b.v.
 De Stinse 15
 3823 VM Amersfoort
 email: Results4Care at cs.com
 phone + 31654614458
 fax +3133 2570169
 Dutch Chamber of Commerce number: 32121206
 ___
 openEHR-clinical mailing list
 openEHR-clinical at openehr.org
 http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-clinical

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