Use Archetypes and ADL file in Java
Pablo Pazos Gutierrez wrote: Hi Alessandro, ADL defines the structure of your clinical data, In practice, ADL defines an instance of the archetype object model (AOM), that instance is the one you can handle from java. But the clinical data values must be set on the reference information model (RM). So, you must have: an implementation of the AOM, an ADLParser that parses ADL to an instance of AOM, and an implementation of the RM, and processing the AOM you can create an empty instance of the RM (empty because you have no clinical data yet). Here you can find a project (my degree thesis) that implements openEHR, and can generate any clinical record (is Java based): http://code.google.com/p/open-ehr-gen-framework/downloads/list -- Kind regards, Ing. Pablo Pazos Guti?rrez LinkedIn: http://uy.linkedin.com/in/pablopazosgutierrez Blog: http://informatica-medica.blogspot.com/ Twitter: http://twitter.com/ppazos Date: Tue, 29 Mar 2011 06:24:25 -0700 From: padiglionestation at gmail.com To: openehr-technical at openehr.org Subject: Use Archetypes and ADL file in Java Hi everybody I'm Alessandro OpenEhr is I'm working on for my thesis.For the moment I'm using java in the ADLParser file for the openEHR EHRS-. blood_pressure.-OBSERVATION v1.0 adl. I wanted to know, via java objects, how to handle this archetype in java and assign values, such as the systolic pressure. More generally, how can I access the OpenEhr archetypes in java? I attach the file that I have produced so far. Thank you for your attention, good job. Alessandro http://old.nabble.com/file/p31266646/Test_Archetype.java Test_Archetype.java -- View this message in context: http://old.nabble.com/Use-Archetypes-and-ADL-file-in-Java-tp31266646p31266646.html Sent from the openehr-technical mailing list archive at Nabble.com. ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical Thanks for your reply and for the documents that I have passed.From what I understood ADL class represents an instance of AOM right?If you would like to know how I can map the archetype on an RM? Let me explain better: how ADL I openEHR-EHR-OBSERVATION. blood_pressure. v1. I like adl access its properties via the RM Observation? You can find some examples in this regard? I apologize but I am beginning with OpenEhr. -- View this message in context: http://old.nabble.com/Use-Archetypes-and-ADL-file-in-Java-tp31266646p31275301.html Sent from the openehr-technical mailing list archive at Nabble.com.
Use Archetypes and ADL file in Java
Hi Alessandro! What is it that you want to do in the thesis? If you tell us a bit more about the goal it might be easier to give you some hints along the way. Is it a master thesis or some other kind of thesis? What is the time-span? Good luck with getting into openEHR! Best regards, Erik Sundvall erik.sundvall at liu.se http://www.imt.liu.se/~erisu/? Tel: +46-13-286733 P.s. On my research page under Teaching http://www.imt.liu.se/~erisu/#teaching you'll find links to some master thesis projects that might have some useful introductory chapters etc. On Wed, Mar 30, 2011 at 11:09, Alessandro Fass padiglionestation at gmail.com wrote: Pablo Pazos Gutierrez wrote: Hi Alessandro, ADL defines the structure of your clinical data, In practice, ADL defines an instance of the archetype object model (AOM), that instance is the one you can handle from java. But the clinical data values must be set on the reference information model (RM). So, you must have: an implementation of the AOM, an ADLParser that parses ADL to an instance of AOM, and an implementation of the RM, and processing the AOM you can create an empty instance of the RM (empty because you have no clinical data yet). Here you can find a project (my degree thesis) that implements openEHR, and can generate any clinical record (is Java based): http://code.google.com/p/open-ehr-gen-framework/downloads/list -- Kind regards, Ing. Pablo Pazos Guti?rrez LinkedIn: http://uy.linkedin.com/in/pablopazosgutierrez Blog: http://informatica-medica.blogspot.com/ Twitter: http://twitter.com/ppazos Date: Tue, 29 Mar 2011 06:24:25 -0700 From: padiglionestation at gmail.com To: openehr-technical at openehr.org Subject: Use Archetypes and ADL file in Java Hi everybody I'm Alessandro OpenEhr is I'm working on for my thesis.For the moment I'm using java in the ADLParser file for the openEHR EHRS-. blood_pressure.-OBSERVATION v1.0 adl. I wanted to know, via java objects, how to handle this archetype in java and assign values, such as the systolic pressure. More generally, how can I access the OpenEhr archetypes in java? I attach the file that I have produced so far. ?Thank you for your attention, good job. Alessandro http://old.nabble.com/file/p31266646/Test_Archetype.java Test_Archetype.java -- View this message in context: http://old.nabble.com/Use-Archetypes-and-ADL-file-in-Java-tp31266646p31266646.html Sent from the openehr-technical mailing list archive at Nabble.com. ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical Thanks for your reply and for the documents that I have passed.From what I understood ADL class represents an instance of AOM right?If you would like to know how I can map the archetype on an RM? Let me explain better: how ADL I openEHR-EHR-OBSERVATION. blood_pressure. v1. I like adl access its properties via the RM Observation? You can find some examples in this regard? I apologize but I am beginning with OpenEhr. -- View this message in context: http://old.nabble.com/Use-Archetypes-and-ADL-file-in-Java-tp31266646p31275301.html Sent from the openehr-technical mailing list archive at Nabble.com. ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical
Use Archetypes and ADL file in Java
Erik Sundvall-2 wrote: Hi Alessandro! What is it that you want to do in the thesis? If you tell us a bit more about the goal it might be easier to give you some hints along the way. Is it a master thesis or some other kind of thesis? What is the time-span? Good luck with getting into openEHR! Best regards, Erik Sundvall erik.sundvall at liu.se http://www.imt.liu.se/~erisu/? Tel: +46-13-286733 P.s. On my research page under Teaching http://www.imt.liu.se/~erisu/#teaching you'll find links to some master thesis projects that might have some useful introductory chapters etc. On Wed, Mar 30, 2011 at 11:09, Alessandro Fass padiglionestation at gmail.com wrote: Pablo Pazos Gutierrez wrote: Hi Alessandro, ADL defines the structure of your clinical data, In practice, ADL defines an instance of the archetype object model (AOM), that instance is the one you can handle from java. But the clinical data values must be set on the reference information model (RM). So, you must have: an implementation of the AOM, an ADLParser that parses ADL to an instance of AOM, and an implementation of the RM, and processing the AOM you can create an empty instance of the RM (empty because you have no clinical data yet). Here you can find a project (my degree thesis) that implements openEHR, and can generate any clinical record (is Java based): http://code.google.com/p/open-ehr-gen-framework/downloads/list -- Kind regards, Ing. Pablo Pazos Guti?rrez LinkedIn: http://uy.linkedin.com/in/pablopazosgutierrez Blog: http://informatica-medica.blogspot.com/ Twitter: http://twitter.com/ppazos Date: Tue, 29 Mar 2011 06:24:25 -0700 From: padiglionestation at gmail.com To: openehr-technical at openehr.org Subject: Use Archetypes and ADL file in Java Hi everybody I'm Alessandro OpenEhr is I'm working on for my thesis.For the moment I'm using java in the ADLParser file for the openEHR EHRS-. blood_pressure.-OBSERVATION v1.0 adl. I wanted to know, via java objects, how to handle this archetype in java and assign values, such as the systolic pressure. More generally, how can I access the OpenEhr archetypes in java? I attach the file that I have produced so far. ?Thank you for your attention, good job. Alessandro http://old.nabble.com/file/p31266646/Test_Archetype.java Test_Archetype.java -- View this message in context: http://old.nabble.com/Use-Archetypes-and-ADL-file-in-Java-tp31266646p31266646.html Sent from the openehr-technical mailing list archive at Nabble.com. ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical Thanks for your reply and for the documents that I have passed.From what I understood ADL class represents an instance of AOM right?If you would like to know how I can map the archetype on an RM? Let me explain better: how ADL I openEHR-EHR-OBSERVATION. blood_pressure. v1. I like adl access its properties via the RM Observation? You can find some examples in this regard? I apologize but I am beginning with OpenEhr. -- View this message in context: http://old.nabble.com/Use-Archetypes-and-ADL-file-in-Java-tp31266646p31275301.html Sent from the openehr-technical mailing list archive at Nabble.com. ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical Hi Erik. the objective of my thesis is to represent, through OpenEhr, values of analysis (eg.CGE, Ekg, Eeg, etc.) a patient, store in a db (MySql).Once stored in the db values analysis are taken and compared with standard values to determine if the patient is in imminent danger of life or not.This is represented by a code and stored in the db with the analysis of the patient. Thank you for your interest. -- View this message in context: http://old.nabble.com/Use-Archetypes-and-ADL-file-in-Java-tp31266646p31275638.html Sent from the openehr-technical mailing list archive at Nabble.com.
Use Archetypes and ADL file in Java
Hi Alessandro, Let me say this in advance; none of what is written below is there to discourage you, or to express any negative remarks about your intention. I think the best thing I can do is to give you a picture of where you are now, and others may help in other ways. You have a thesis to complete, which is what I would see as implementing an openEHR based information system, then performing some analysis to infer about a particular state (in danger or not) Based on your questions, I think you need to understand openEHR better first, before attempting to implement an actual system. If you think that you can just download some sort of installation package and start using it to enter/store/read data right away, this is not as easy as you think it would be. We'll get to this. First, you need to read openEHR documentation, to understand what openEHR is all about. You need to understand the roles of the following: ADL, Archetypes, Reference Model, Templates (probably not as important as the others for you) and the relationship between them. If you try to move forward without having at least an intermediate understanding of these, you'll certainly have issues and you will lose time. The documentation of openEHR is really good, and it is available as pdf files. It is however a dense set of documents, so don't expect to go over them in two days and figure it all out. After you fell you have an understanding of how this all works, you can start hunting for existing work. There are various attempts to deliver software that may help you out in doing what you're doing, but you'll have to work on them to see if they are actually going to help you. Tim Cook, Pablo, and I have provided software in open source form, but you need to work on these options. I for one can say that my work is still immature, and will take time to become a one shop solution to all things you'd like to do with openEHR. In short, try to establish a solid understanding of openEHR first, then move the implementation matters, or you'll lose valuable time. As you progress, you can ask your questions here, and I'm sure you'll get help from the community. Good luck! Seref On Wed, Mar 30, 2011 at 11:02 AM, Alessandro Fass padiglionestation at gmail.com wrote: Erik Sundvall-2 wrote: Hi Alessandro! What is it that you want to do in the thesis? If you tell us a bit more about the goal it might be easier to give you some hints along the way. Is it a master thesis or some other kind of thesis? What is the time-span? Good luck with getting into openEHR! Best regards, Erik Sundvall erik.sundvall at liu.se http://www.imt.liu.se/~erisu/? Tel: +46-13-286733 P.s. On my research page under Teaching http://www.imt.liu.se/~erisu/#teaching you'll find links to some master thesis projects that might have some useful introductory chapters etc. On Wed, Mar 30, 2011 at 11:09, Alessandro Fass padiglionestation at gmail.com wrote: Pablo Pazos Gutierrez wrote: Hi Alessandro, ADL defines the structure of your clinical data, In practice, ADL defines an instance of the archetype object model (AOM), that instance is the one you can handle from java. But the clinical data values must be set on the reference information model (RM). So, you must have: an implementation of the AOM, an ADLParser that parses ADL to an instance of AOM, and an implementation of the RM, and processing the AOM you can create an empty instance of the RM (empty because you have no clinical data yet). Here you can find a project (my degree thesis) that implements openEHR, and can generate any clinical record (is Java based): http://code.google.com/p/open-ehr-gen-framework/downloads/list -- Kind regards, Ing. Pablo Pazos Guti?rrez LinkedIn: http://uy.linkedin.com/in/pablopazosgutierrez Blog: http://informatica-medica.blogspot.com/ Twitter: http://twitter.com/ppazos Date: Tue, 29 Mar 2011 06:24:25 -0700 From: padiglionestation at gmail.com To: openehr-technical at openehr.org Subject: Use Archetypes and ADL file in Java Hi everybody I'm Alessandro OpenEhr is I'm working on for my thesis.For the moment I'm using java in the ADLParser file for the openEHR EHRS-. blood_pressure.-OBSERVATION v1.0 adl. I wanted to know, via java objects, how to handle this archetype in java and assign values, such as the systolic pressure. More generally, how can I access the OpenEhr archetypes in java? I attach the file that I have produced so far. ?Thank you for your attention, good job. Alessandro http://old.nabble.com/file/p31266646/Test_Archetype.java Test_Archetype.java -- View this message in context: http://old.nabble.com/Use-Archetypes-and-ADL-file-in-Java-tp31266646p31266646.html Sent from the openehr-technical mailing list archive at Nabble.com. ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical
Use Archetypes and ADL file in Java
. ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical -- next part -- An HTML attachment was scrubbed... URL: http://lists.openehr.org/mailman/private/openehr-technical_lists.openehr.org/attachments/20110330/607b7ba8/attachment.html
Use Archetypes and ADL file in Java
://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical Thanks for your reply and for the documents that I have passed.From what I understood ADL class represents an instance of AOM right?If you would like to know how I can map the archetype on an RM? Let me explain better: how ADL I openEHR-EHR-OBSERVATION. blood_pressure. v1. I like adl access its properties via the RM Observation? You can find some examples in this regard? I apologize but I am beginning with OpenEhr. * * -- next part -- An HTML attachment was scrubbed... URL: http://lists.openehr.org/mailman/private/openehr-technical_lists.openehr.org/attachments/20110330/00cefcb9/attachment.html
