commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2020-08-17 12:05:12
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new.3399 (New)
Package is "octave-forge-nan"
Mon Aug 17 12:05:12 2020 rev:10 rq:826837 version:3.5.0
Changes:
--- /work/SRC/openSUSE:Factory/octave-forge-nan/octave-forge-nan.changes
2019-12-09 21:38:16.806025926 +0100
+++
/work/SRC/openSUSE:Factory/.octave-forge-nan.new.3399/octave-forge-nan.changes
2020-08-17 12:05:49.734709261 +0200
@@ -1,0 +2,11 @@
+Tue Aug 4 22:26:54 UTC 2020 - Atri Bhattacharya
+
+- Update to version 3.5.0:
+ * ttest: support output arguments CI and STATS.
+ * fishers_exact_test:
+- Use VPA from symbolic pkg if available.
+- Add unit tests.
+- Improve help.
+- Remove exec bits from a file that isn't in executable path.
+
+---
Old:
nan-3.4.5.tar.gz
New:
nan-3.5.0.tar.gz
Other differences:
--
++ octave-forge-nan.spec ++
--- /var/tmp/diff_new_pack.8mu8Fe/_old 2020-08-17 12:05:51.290710129 +0200
+++ /var/tmp/diff_new_pack.8mu8Fe/_new 2020-08-17 12:05:51.294710130 +0200
@@ -1,7 +1,7 @@
#
# spec file for package octave-forge-nan
#
-# Copyright (c) 2019 SUSE LLC
+# Copyright (c) 2020 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
@@ -18,7 +18,7 @@
%define octpkg nan
Name: octave-forge-%{octpkg}
-Version:3.4.5
+Version:3.5.0
Release:0
Summary:A statistics and machine learning toolbox
License:GPL-3.0-or-later
@@ -43,6 +43,9 @@
%install
%octave_pkg_install
+# Spurious exec bit
+chmod -x
%{buildroot}%{_datadir}/octave/packages/nan-%{version}/fishers_exact_test.m
+
%check
%octave_pkg_test
++ nan-3.4.5.tar.gz -> nan-3.5.0.tar.gz ++
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/nan-3.4.5/DESCRIPTION new/nan-3.5.0/DESCRIPTION
--- old/nan-3.4.5/DESCRIPTION 2019-11-21 13:54:16.0 +0100
+++ new/nan-3.5.0/DESCRIPTION 2020-07-12 23:58:03.0 +0200
@@ -1,6 +1,6 @@
Name: NaN
-Version: 3.4.5
-Date: 2019-11-21
+Version: 3.5.0
+Date: 2020-07-12
Author: Alois Schloegl
Maintainer: Alois Schloegl
Title: The NaN-toolbox
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/nan-3.4.5/NEWS new/nan-3.5.0/NEWS
--- old/nan-3.4.5/NEWS 2019-11-21 13:54:16.0 +0100
+++ new/nan-3.5.0/NEWS 2020-07-12 23:58:03.0 +0200
@@ -1,3 +1,13 @@
+2020-07-12: Release of NaN-toolbox 3.5.0
+
+* ttest:
+ - support output arguments CI and STATS
+
+* fishers_exact_test:
+ - use VPA from symbolic pkg if available;
+ - add unit tests;
+ - improve help
+
2019-11-16: Release of NaN-Tb v3.4.5
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/nan-3.4.5/inst/fishers_exact_test.m
new/nan-3.5.0/inst/fishers_exact_test.m
--- old/nan-3.4.5/inst/fishers_exact_test.m 2019-11-21 13:54:16.0
+0100
+++ new/nan-3.5.0/inst/fishers_exact_test.m 2020-07-12 23:58:03.0
+0200
@@ -7,11 +7,13 @@
% p = fishers_exact_test(a,b,c,d)
%
% with H being a 2x2 matrix representing a contincency table H = [[a,b];[c,d]]
-% and p is the resulting p-value. The implementation provides exact results
-% for small sample sizes, and might be subject to the limited accuracy of
-% floating point numbers for large sample sizes (a warning might be shown).
+% and p is the resulting p-value. The implementation provides exact results,
+% when (1) the symbolic toolbox (with vpa) is loaded, or (2) for small sample
+% sizes. In the latter case, the result might be subject to the limited
accuracy of
+% floating point numbers for large sample sizes (a warning might be shown);
+% in the case, the symbolic toolbox should be loaded.
%
-% Reference:
+% References:
% [1] https://en.wikipedia.org/wiki/Fisher%27s_exact_test
% [2] https://en.wikipedia.org/wiki/Lady_tasting_tea
% [3] Fisher, R. A. (1922). "On the interpretation of χ2 from contingency
@@ -47,7 +49,7 @@
% Boston, MA 02111-1307, USA.
if (nargin==1) && isequal(size(a),[2,2]),
- H = a;
+ H = a;
a=H(1,1);
b=H(1,2);
c=H(2,1);
@@ -57,12 +59,26 @@
else
error('invalid input argument')
end
-n = sum(H(:));
+
+try
+ % use symbolic package if available
+ a = vpa(a);
+ b = vpa(b);
+ c = vpa(c);
+ d = vpa(d);
+end
u = nchoosek(a+b,a);
v = nchoose
commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2019-12-09 21:37:36
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new.4691 (New)
Package is "octave-forge-nan"
Mon Dec 9 21:37:36 2019 rev:9 rq:755318 version:3.4.5
Changes:
--- /work/SRC/openSUSE:Factory/octave-forge-nan/octave-forge-nan.changes
2019-11-28 10:15:37.151638078 +0100
+++
/work/SRC/openSUSE:Factory/.octave-forge-nan.new.4691/octave-forge-nan.changes
2019-12-09 21:38:16.806025926 +0100
@@ -1,0 +2,18 @@
+Mon Dec 9 15:40:02 UTC 2019 - Stefan Brüns
+
+- Update to version 3.4.5:
+ * fishers_exact_test: added
+ * bug fixes for:
++ #57263: [octave forge] (nan) fails to build on a system
+ without libblas (Octave built with OpenBLAS)
++ #57232: [octave forge] (nan) Spelling error in message of
+ function str2array
++ #50248: [octave forge] (nan) Spelling error in the help
+ string of the train function
++ #57228 "[octave forge] (nan) fails to build with undefined
+ references in Octave 5 when LDFLAGS is set"
+ * gscatter: fix use of argument "doleg"
+ * address "warning: no return statement in function returning non-void"
+- Drop fix_missing_return.patch, fixed upstream
+
+---
Old:
fix_missing_return.patch
nan-3.4.3.tar.gz
New:
nan-3.4.5.tar.gz
Other differences:
--
++ octave-forge-nan.spec ++
--- /var/tmp/diff_new_pack.Ok5pJ2/_old 2019-12-09 21:38:18.186025382 +0100
+++ /var/tmp/diff_new_pack.Ok5pJ2/_new 2019-12-09 21:38:18.190025381 +0100
@@ -18,14 +18,13 @@
%define octpkg nan
Name: octave-forge-%{octpkg}
-Version:3.4.3
+Version:3.4.5
Release:0
Summary:A statistics and machine learning toolbox
License:GPL-3.0-or-later
Group: Productivity/Scientific/Math
-URL:https://octave.sourceforge.io
+URL:https://octave.sourceforge.io/%{octpkg}/index.html
Source0:
https://downloads.sourceforge.net/octave/%{octpkg}-%{version}.tar.gz
-Patch0: fix_missing_return.patch
BuildRequires: libsvm-devel
BuildRequires: octave-devel >= 3.8.0
Requires: octave-cli >= 3.8.0
@@ -36,10 +35,6 @@
%prep
%setup -q -c %{name}-%{version}
-pushd %{octpkg}-%{version}
-%patch0 -p1
-popd
-sed -i 's/-lblas/-l%{octave_blas}/g' %{octpkg}-%{version}/src/Makefile.in
%octave_pkg_src
%build
++ nan-3.4.3.tar.gz -> nan-3.4.5.tar.gz ++
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/nan-3.4.3/DESCRIPTION new/nan-3.4.5/DESCRIPTION
--- old/nan-3.4.3/DESCRIPTION 2019-10-27 23:26:24.0 +0100
+++ new/nan-3.4.5/DESCRIPTION 2019-11-21 13:54:16.0 +0100
@@ -1,6 +1,6 @@
Name: NaN
-Version: 3.4.3
-Date: 2019-10-27
+Version: 3.4.5
+Date: 2019-11-21
Author: Alois Schloegl
Maintainer: Alois Schloegl
Title: The NaN-toolbox
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/nan-3.4.3/INDEX new/nan-3.4.5/INDEX
--- old/nan-3.4.3/INDEX 2019-10-27 23:26:24.0 +0100
+++ new/nan-3.4.5/INDEX 2019-11-21 13:54:16.0 +0100
@@ -13,5 +13,6 @@
bland_altman cumsumskipnan range signrank histo
histo2 histo3 histo4 kolmogorov_smirnov kstest2 roc
kappa load_cifar100 load_cifar10 load_mnist
+ fishers_exact_test
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/nan-3.4.3/NEWS new/nan-3.4.5/NEWS
--- old/nan-3.4.3/NEWS 2019-10-27 23:26:24.0 +0100
+++ new/nan-3.4.5/NEWS 2019-11-21 13:54:16.0 +0100
@@ -1,3 +1,16 @@
+
+2019-11-16: Release of NaN-Tb v3.4.5
+
+- fishers_exact_test: added
+
+- bug fixes for:
+ #57263: [octave forge] (nan) fails to build on a system without libblas
(Octave built with OpenBLAS)
+ #57232: [octave forge] (nan) Spelling error in message of function str2array
+ #50248: [octave forge] (nan) Spelling error in the help string of the train
function
+ #57228 "[octave forge] (nan) fails to build with undefined references in
Octave 5 when LDFLAGS is set"
+- gscatter: fix use of argument "doleg"
+- address "warning: no return statement in function returning non-void"
+
2019-10-27: Release of NaN-Tb v3.4.3
- Makefile.*
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/nan-3.4.3/inst/fishers_exact_test.m
new/nan-3.4.5/inst/fishers_exact_test.m
--- old/nan-3.4.3/inst/fishers_exact_test.m 1970-01-01 01:00:00.0
+0100
+++ new/nan-3.4.5/inst/fishers_exact_test.m 2019-11-21 13:54:16.0
+0100
@@
commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2019-11-28 10:15:03
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new.26869 (New)
Package is "octave-forge-nan"
Thu Nov 28 10:15:03 2019 rev:8 rq:751373 version:3.4.3
Changes:
--- /work/SRC/openSUSE:Factory/octave-forge-nan/octave-forge-nan.changes
2017-08-28 15:14:57.379348621 +0200
+++
/work/SRC/openSUSE:Factory/.octave-forge-nan.new.26869/octave-forge-nan.changes
2019-11-28 10:15:37.151638078 +0100
@@ -1,0 +2,51 @@
+Wed Nov 27 12:26:28 UTC 2019 - Stefan Brüns
+
+- Update to version 3.4.3:
+ + Makefile.*
+Add missing copyright/licenses
+ + liblinear, libsvm:
+add license from original author
+ + roc.m: number of data points limited to about 5000
+add final data point at (1,1).
+- Update to version 3.4.0:
+ + quadratic classifiers:
+check for positive-definiteness of covariance matrix
+and return no classification (encoded as NaN), if not.
+ + mad, meandev:
+make sure source is ascii/utf-8 compliant
+- Update to version 3.3.0:
+ + detrend: the 2nd output (trend) can be interpolated and should
+not contain NaNs.
+ + train_sc: some supported classifiers should not be used
+with the short-cut for two-class problems.
+ + xval: report also results w/o crossvaliation
+ + ecdf: fix ylim in case data contains missing values.
+- Update to version 3.2.3:
+ + ROC is included. ROC is derived
+from the implementation in "biosig for octave and matlab"
+ biosig-code/biosig4matlab/t490_EvaluationCriteria/
+
https://sourceforge.net/p/biosig/code/ci/master/tree/biosig4matlab/t490_EvaluationCriteria/
+ + load_cifar100 load_cifar10 load_mnist:
+loading of various machine-learning databases
+ + kolmogorov_smirnov:
+ Multiple two-sample Kolmogorov-Smirnov test
+ + kstest2:
+ wrapper for kolmogorov_smirnov
+ + requires Octave 3.8 or later
+ + histo2, histo3:
+bug fix for case when whole column contains NaNs
+ + inst/signrank.m: add Wilcoxon signred rank test
+Unlike Octave's wilcoxon_test, this works also for
+sample sizes smaller than N=25
+ + corrcoef: improve documentation on one-
+and two- pass algorithm
+ + histogram functions (histo.m) included
+ + upgrade to liblinear 2.2.1
+weightening of samples not supported anymore
+ + upgrade to libsvm 3.2.3
+weightening of samples not supported anymore
+ + minor changes
+- Fix missing return value for non-void function, add
+ fix_missing_return.patch
+
+---
Old:
nan-3.1.4.tar.gz
New:
fix_missing_return.patch
nan-3.4.3.tar.gz
Other differences:
--
++ octave-forge-nan.spec ++
--- /var/tmp/diff_new_pack.x0VnZj/_old 2019-11-28 10:15:37.855638085 +0100
+++ /var/tmp/diff_new_pack.x0VnZj/_new 2019-11-28 10:15:37.863638085 +0100
@@ -1,7 +1,7 @@
#
# spec file for package octave-forge-nan
#
-# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany.
+# Copyright (c) 2019 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
@@ -12,21 +12,23 @@
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
-# Please submit bugfixes or comments via http://bugs.opensuse.org/
+# Please submit bugfixes or comments via https://bugs.opensuse.org/
#
%define octpkg nan
Name: octave-forge-%{octpkg}
-Version:3.1.4
+Version:3.4.3
Release:0
Summary:A statistics and machine learning toolbox
-License:GPL-3.0+
+License:GPL-3.0-or-later
Group: Productivity/Scientific/Math
-Url:http://octave.sourceforge.net
-Source0:
http://downloads.sourceforge.net/octave/%{octpkg}-%{version}.tar.gz
-BuildRequires: octave-devel
-Requires: octave-cli >= 3.2.0
+URL:https://octave.sourceforge.io
+Source0:
https://downloads.sourceforge.net/octave/%{octpkg}-%{version}.tar.gz
+Patch0: fix_missing_return.patch
+BuildRequires: libsvm-devel
+BuildRequires: octave-devel >= 3.8.0
+Requires: octave-cli >= 3.8.0
%description
A statistics and machine learning toolbox for data with and w/o missing values.
@@ -34,7 +36,10 @@
%prep
%setup -q -c %{name}-%{version}
-sed -i 's/-lblas/-l%{octave_blas}/g' %{octpkg}-%{version}/src/Makefile
+pushd %{octpkg}-%{version}
+%patch0 -p1
+popd
+sed -i 's/-lblas/-l%{octave_blas}/g' %{octpkg}-%{version}/src/Makefile.in
%octave_pkg_src
%build
++ fix_missing_r
commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2017-08-28 15:13:16
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new (New)
Package is "octave-forge-nan"
Mon Aug 28 15:13:16 2017 rev:7 rq:518454 version:3.1.4
Changes:
--- /work/SRC/openSUSE:Factory/octave-forge-nan/octave-forge-nan.changes
2016-09-21 18:48:43.0 +0200
+++ /work/SRC/openSUSE:Factory/.octave-forge-nan.new/octave-forge-nan.changes
2017-08-28 15:14:57.379348621 +0200
@@ -1,0 +2,9 @@
+Wed Aug 23 15:34:29 UTC 2017 - dmitr...@opensuse.org
+
+- Update to version 3.1.4
+ * Minor changes and fixes, see `news nan` for details
+- Drop oblosete:
+ * nan-cpp11.patch
+ * nan_xpt2d_add_return_for_BE.patch
+
+---
Old:
nan-3.0.3.tar.gz
nan-cpp11.patch
nan_xpt2d_add_return_for_BE.patch
New:
nan-3.1.4.tar.gz
Other differences:
--
++ octave-forge-nan.spec ++
--- /var/tmp/diff_new_pack.RrHZHJ/_old 2017-08-28 15:14:59.059112606 +0200
+++ /var/tmp/diff_new_pack.RrHZHJ/_new 2017-08-28 15:14:59.063112044 +0200
@@ -1,7 +1,7 @@
#
# spec file for package octave-forge-nan
#
-# Copyright (c) 2016 SUSE LINUX GmbH, Nuernberg, Germany.
+# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
@@ -18,18 +18,13 @@
%define octpkg nan
Name: octave-forge-%{octpkg}
-Version:3.0.3
+Version:3.1.4
Release:0
Summary:A statistics and machine learning toolbox
License:GPL-3.0+
Group: Productivity/Scientific/Math
Url:http://octave.sourceforge.net
Source0:
http://downloads.sourceforge.net/octave/%{octpkg}-%{version}.tar.gz
-Patch1: nan_xpt2d_add_return_for_BE.patch
-# PATCH-FIX-OPENSUSE nan-cpp11.patch -- Fix build with GCC 4.8
-Patch2: nan-cpp11.patch
-BuildRequires: blas-devel
-BuildRequires: gcc-c++
BuildRequires: octave-devel
Requires: octave-cli >= 3.2.0
@@ -39,10 +34,7 @@
%prep
%setup -q -c %{name}-%{version}
-%patch1 -p0
-%if 0%{?suse_version} <= 1320
-%patch2 -p0
-%endif
+sed -i 's/-lblas/-l%{octave_blas}/g' %{octpkg}-%{version}/src/Makefile
%octave_pkg_src
%build
++ nan-3.0.3.tar.gz -> nan-3.1.4.tar.gz ++
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/nan-3.0.3/DESCRIPTION new/nan-3.1.4/DESCRIPTION
--- old/nan-3.0.3/DESCRIPTION 2016-08-10 00:16:09.0 +0200
+++ new/nan-3.1.4/DESCRIPTION 2017-08-23 11:01:57.685205054 +0200
@@ -1,6 +1,6 @@
Name: NaN
-Version: 3.0.3
-Date: 2016-08-10
+Version: 3.1.4
+Date: 2017-08-23
Author: Alois Schloegl
Maintainer: Alois Schloegl
Title: The NaN-toolbox
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/nan-3.0.3/Makefile new/nan-3.1.4/Makefile
--- old/nan-3.0.3/Makefile 1970-01-01 01:00:00.0 +0100
+++ new/nan-3.1.4/Makefile 2017-08-23 11:01:57.685205054 +0200
@@ -0,0 +1,235 @@
+## Copyright 2015-2016 Carnë Draug
+## Copyright 2015-2016 Oliver Heimlich
+## Copyright 2017 Julien Bect
+## Copyright 2017 Olaf Till
+##
+## Copying and distribution of this file, with or without modification,
+## are permitted in any medium without royalty provided the copyright
+## notice and this notice are preserved. This file is offered as-is,
+## without any warranty.
+
+## Some basic tools (can be overriden using environment variables)
+SED ?= sed
+TAR ?= tar
+GREP ?= grep
+CUT ?= cut
+TR ?= tr
+
+## Note the use of ':=' (immediate set) and not just '=' (lazy set).
+## http://stackoverflow.com/a/448939/1609556
+package := $(shell $(GREP) "^Name: " DESCRIPTION | $(CUT) -f2 -d" " | \
+$(TR) '[:upper:]' '[:lower:]')
+version := $(shell $(GREP) "^Version: " DESCRIPTION | $(CUT) -f2 -d" ")
+
+## This are the paths that will be created for the releases. Using
+## $(realpath ...) avoids problems with symlinks.
+target_dir := $(realpath .)/target
+release_dir := $(target_dir)/$(package)-$(version)
+release_tarball := $(target_dir)/$(package)-$(version).tar.gz
+html_dir := $(target_dir)/$(package)-html
+html_tarball := $(target_dir)/$(package)-html.tar.gz
+installation_dir := $(target_dir)/.installation
+package_list := $(installation_dir)/.octave_packages
+install_stamp:= $(installation_dir)/.install_stamp
+
+## These can be set by environment variables which allow to easily
+## test with different Octave versions.
+ifndef OCTAVE
+OCTAVE :
commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2016-09-21 18:48:41
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new (New)
Package is "octave-forge-nan"
Changes:
--- /work/SRC/openSUSE:Factory/octave-forge-nan/octave-forge-nan.changes
2016-06-14 23:07:45.0 +0200
+++ /work/SRC/openSUSE:Factory/.octave-forge-nan.new/octave-forge-nan.changes
2016-09-21 18:48:43.0 +0200
@@ -1,0 +2,8 @@
+Sat Sep 17 18:45:29 UTC 2016 - dmitr...@opensuse.org
+
+- Update to version 3.0.3
+ * Bug fixes
+- Fix build with GCC 4.8
+ * nan-cpp11.patch
+
+---
Old:
nan-3.0.1.tar.gz
New:
nan-3.0.3.tar.gz
nan-cpp11.patch
Other differences:
--
++ octave-forge-nan.spec ++
--- /var/tmp/diff_new_pack.d0vGzW/_old 2016-09-21 18:48:45.0 +0200
+++ /var/tmp/diff_new_pack.d0vGzW/_new 2016-09-21 18:48:45.0 +0200
@@ -18,7 +18,7 @@
%define octpkg nan
Name: octave-forge-%{octpkg}
-Version:3.0.1
+Version:3.0.3
Release:0
Summary:A statistics and machine learning toolbox
License:GPL-3.0+
@@ -26,6 +26,8 @@
Url:http://octave.sourceforge.net
Source0:
http://downloads.sourceforge.net/octave/%{octpkg}-%{version}.tar.gz
Patch1: nan_xpt2d_add_return_for_BE.patch
+# PATCH-FIX-OPENSUSE nan-cpp11.patch -- Fix build with GCC 4.8
+Patch2: nan-cpp11.patch
BuildRequires: blas-devel
BuildRequires: gcc-c++
BuildRequires: octave-devel
@@ -37,7 +39,10 @@
%prep
%setup -q -c %{name}-%{version}
-%patch1 -p1
+%patch1 -p0
+%if 0%{?suse_version} <= 1320
+%patch2 -p0
+%endif
%octave_pkg_src
%build
++ nan-3.0.1.tar.gz -> nan-3.0.3.tar.gz ++
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/DESCRIPTION new/nan-3.0.3/DESCRIPTION
--- old/NaN/DESCRIPTION 2016-02-26 16:09:14.0 +0100
+++ new/nan-3.0.3/DESCRIPTION 2016-08-10 00:16:09.0 +0200
@@ -1,6 +1,6 @@
Name: NaN
-Version: 3.0.1
-Date: 2016-02-26
+Version: 3.0.3
+Date: 2016-08-10
Author: Alois Schloegl
Maintainer: Alois Schloegl
Title: The NaN-toolbox
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/INDEX new/nan-3.0.3/INDEX
--- old/NaN/INDEX 2016-02-26 16:09:14.0 +0100
+++ new/nan-3.0.3/INDEX 2016-08-10 00:16:09.0 +0200
@@ -9,5 +9,5 @@
var mean sem spearman trimean tpdf tcdf tinv zscore
flag_implicit_significance xcovf train_sc test_sc
xval classify train_lda_sparse decovm gscatter mahal
- cdfplot hist2res fss cat2bin ttest ttest2.m
+ cdfplot hist2res fss cat2bin ttest ttest2 xptopen.m
bland_altman cumsumskipnan range
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/NEWS new/nan-3.0.3/NEWS
--- old/NaN/NEWS2016-02-26 16:07:46.0 +0100
+++ new/nan-3.0.3/NEWS 2016-08-10 00:16:09.0 +0200
@@ -1,3 +1,15 @@
+
+2016-08-10: Release of NaN-tb v3.0.3
+- tcdf: fix bug #48731 (thanks to Nir Krakauer)
+- coercoef: add comment on Matlab compatibiliy in help
+- test_fss, load_fisheriris:
+ fix support on mingw platform (Windows)
+
+2016-07-30: Release of NaN-tb v3.0.2
+- Octave/Windows: setenv CC=gcc (fixes bug 47559)
+- no OpenMP for Octave/Windows and MacOSX
+
+
2015-02-26: Release of NaN-tb v3.0.1
- fixes version number
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/VERSION new/nan-3.0.3/VERSION
--- old/NaN/VERSION 2016-02-26 16:09:14.0 +0100
+++ new/nan-3.0.3/VERSION 1970-01-01 01:00:00.0 +0100
@@ -1,3 +0,0 @@
-# NaN-toolbox http://pub.ist.ac.at/~schloegl/matlab/NaN
-# Version: 3.0.1
-# Date: 2016-02-26
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/doc/INSTALL new/nan-3.0.3/doc/INSTALL
--- old/NaN/doc/INSTALL 2014-01-10 14:34:15.0 +0100
+++ new/nan-3.0.3/doc/INSTALL 2016-08-10 00:16:09.0 +0200
@@ -48,7 +48,7 @@
---
- $Id: INSTALL 12492 2014-01-10 13:34:15Z schloegl $
+ $Id$
Copyright (c) 2000-2003,2005,2006,2009,2010,2011,2014 by Alois Schloegl
This is part of the NaN-toolbox
http://pub.ist.ac.at/~schloegl/matlab/NaN/
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/doc/README.TXT new/nan-3.0.3/doc/README.TXT
--- old/NaN/doc/README.TXT 2014-01-10 14:34:15.0 +0100
+++ new/nan-3.0.3/doc/README.TXT2016-08-10 00:16:09.
commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2016-06-14 23:07:44
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new (New)
Package is "octave-forge-nan"
Changes:
--- /work/SRC/openSUSE:Factory/octave-forge-nan/octave-forge-nan.changes
2016-04-28 16:56:56.0 +0200
+++ /work/SRC/openSUSE:Factory/.octave-forge-nan.new/octave-forge-nan.changes
2016-06-14 23:07:45.0 +0200
@@ -1,0 +2,9 @@
+Fri Jun 10 17:51:45 UTC 2016 - dmitr...@opensuse.org
+
+- Update to version 3.0.1
+ * no changelog available
+- Drop obsolete
+ * nan-openmp.patch
+ * nan-gcc.patch
+
+---
Old:
nan-2.8.1.tar.gz
nan-gcc.patch
nan-openmp.patch
New:
nan-3.0.1.tar.gz
Other differences:
--
++ octave-forge-nan.spec ++
--- /var/tmp/diff_new_pack.lI64ev/_old 2016-06-14 23:07:46.0 +0200
+++ /var/tmp/diff_new_pack.lI64ev/_new 2016-06-14 23:07:46.0 +0200
@@ -18,18 +18,14 @@
%define octpkg nan
Name: octave-forge-%{octpkg}
-Version:2.8.1
+Version:3.0.1
Release:0
Summary:A statistics and machine learning toolbox
License:GPL-3.0+
Group: Productivity/Scientific/Math
Url:http://octave.sourceforge.net
Source0:
http://downloads.sourceforge.net/octave/%{octpkg}-%{version}.tar.gz
-# PATCH-FIX-UPSTREAM nan-openmp.patch -- Fix build with OpenMP support
-Patch1: nan-openmp.patch
-# PATCH-FIX-UPSTREAM nan-gcc.patch -- Fix GCC warnings
-Patch2: nan-gcc.patch
-Patch3: nan_xpt2d_add_return_for_BE.patch
+Patch1: nan_xpt2d_add_return_for_BE.patch
BuildRequires: blas-devel
BuildRequires: gcc-c++
BuildRequires: octave-devel
@@ -41,9 +37,7 @@
%prep
%setup -q -c %{name}-%{version}
-%patch1 -p0
-%patch2 -p1
-%patch3 -p1
+%patch1 -p1
%octave_pkg_src
%build
++ nan-2.8.1.tar.gz -> nan-3.0.1.tar.gz ++
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/DESCRIPTION new/NaN/DESCRIPTION
--- old/NaN/DESCRIPTION 2015-07-06 21:43:26.0 +0200
+++ new/NaN/DESCRIPTION 2016-02-26 16:09:14.0 +0100
@@ -1,7 +1,7 @@
Name: NaN
-Version: 2.8.1
-Date: 2015-07-06
-Author: Alois Schloegl
+Version: 3.0.1
+Date: 2016-02-26
+Author: Alois Schloegl
Maintainer: Alois Schloegl
Title: The NaN-toolbox
Description: A statistics and machine learning toolbox for data with and w/o
missing values
@@ -9,4 +9,3 @@
License: GPLv3+
Url: http://pub.ist.ac.at/~schloegl/matlab/NaN
Autoload: no
-SVNRelease: $Rev: 12813 $
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/INDEX new/NaN/INDEX
--- old/NaN/INDEX 2012-04-02 20:16:48.0 +0200
+++ new/NaN/INDEX 2016-02-26 16:09:14.0 +0100
@@ -9,5 +9,5 @@
var mean sem spearman trimean tpdf tcdf tinv zscore
flag_implicit_significance xcovf train_sc test_sc
xval classify train_lda_sparse decovm gscatter mahal
- cdfplot hist2res fss cat2bin ttest ttest2 xptopen
+ cdfplot hist2res fss cat2bin ttest ttest2.m
bland_altman cumsumskipnan range
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/NEWS new/NaN/NEWS
--- old/NaN/NEWS2015-07-06 21:42:45.0 +0200
+++ new/NaN/NEWS2016-02-26 16:07:46.0 +0100
@@ -1,3 +1,18 @@
+2015-02-26: Release of NaN-tb v3.0.1
+
+- fixes version number
+ two digit version number like 3.0 cannot be used in Octave-forge
+
+2015-09-12: Release of NaN-tb v2.8.3
+
+- ready for gcc/g++ v5
+- honor environment variables CC and CXX
+- fix installer issue on OpenSuse
+- support debian hardening flags
+- internal improvents (in type and macro usage)
+- address a number of compiler warnings
+- bug fixes
+
2015-07-06: Release of NaN-tb v2.8.1
- fix nantest to avoid crashing octave 4.0.0 on windows
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/VERSION new/NaN/VERSION
--- old/NaN/VERSION 2015-07-06 21:43:26.0 +0200
+++ new/NaN/VERSION 2016-02-26 16:09:14.0 +0100
@@ -1,3 +1,3 @@
# NaN-toolbox http://pub.ist.ac.at/~schloegl/matlab/NaN
-# Version: 2.8.1
-# Date: 2015-07-06
+# Version: 3.0.1
+# Date: 2016-02-26
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/inst/trimmean.m new/NaN/inst/trimmean.m
--- old/NaN/inst/trimmean.m 2011-11-03 12:00:50.0 +0100
+++ new/NaN/inst/trimmean.m 2015-12-16 09:58:57.0 +0100
@@ -15
commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2016-04-28 16:54:01
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new (New)
Package is "octave-forge-nan"
Changes:
--- /work/SRC/openSUSE:Factory/octave-forge-nan/octave-forge-nan.changes
2015-07-12 22:52:59.0 +0200
+++ /work/SRC/openSUSE:Factory/.octave-forge-nan.new/octave-forge-nan.changes
2016-04-28 16:56:56.0 +0200
@@ -1,0 +2,5 @@
+Tue Apr 12 10:06:42 UTC 2016 - norm...@linux.vnet.ibm.com
+
+- new nan_xpt2d_add_return_for_BE.patch for ppc64 build
+
+---
New:
nan_xpt2d_add_return_for_BE.patch
Other differences:
--
++ octave-forge-nan.spec ++
--- /var/tmp/diff_new_pack.KPDcyn/_old 2016-04-28 16:56:57.0 +0200
+++ /var/tmp/diff_new_pack.KPDcyn/_new 2016-04-28 16:56:57.0 +0200
@@ -1,7 +1,7 @@
#
# spec file for package octave-forge-nan
#
-# Copyright (c) 2015 SUSE LINUX GmbH, Nuernberg, Germany.
+# Copyright (c) 2016 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
@@ -29,6 +29,7 @@
Patch1: nan-openmp.patch
# PATCH-FIX-UPSTREAM nan-gcc.patch -- Fix GCC warnings
Patch2: nan-gcc.patch
+Patch3: nan_xpt2d_add_return_for_BE.patch
BuildRequires: blas-devel
BuildRequires: gcc-c++
BuildRequires: octave-devel
@@ -42,6 +43,7 @@
%setup -q -c %{name}-%{version}
%patch1 -p0
%patch2 -p1
+%patch3 -p1
%octave_pkg_src
%build
++ nan_xpt2d_add_return_for_BE.patch ++
From: Michel Normand
Subject: nan xpt2d add return for BE
Date: Tue, 12 Apr 2016 12:02:48 +0200
for xpt2d and d2xpt add return for BE, to avoid compilation warning
treated as error by OBS build process:
===
I: Program returns random data in a function
E: octave-forge-nan no-return-in-nonvoid-function xptopen.cpp:1062, 1112
I: Program returns random data in a function
E: octave-forge-nan no-return-in-nonvoid-function xptopen.cpp:1062, 1112
===
Signed-off-by: Michel Normand
---
NaN/src/xptopen.cpp | 17 +
1 file changed, 9 insertions(+), 8 deletions(-)
Index: octave-forge-nan-2.8.1/NaN/src/xptopen.cpp
===
--- octave-forge-nan-2.8.1.orig/NaN/src/xptopen.cpp
+++ octave-forge-nan-2.8.1/NaN/src/xptopen.cpp
@@ -1027,15 +1027,16 @@ if present.
double xpt2d(uint64_t x) {
// x is little-endian 64bit IBM floating point format
- char c = *((char*)&x+7) & 0x7f;
- uint64_t u = x;
- *((char*)&u+7)=0;
-
#if __BYTE_ORDER == __BIG_ENDIAN
mexErrMsgTxt("IEEE-to-IBM conversion on big-endian platform not
supported, yet");
+ return(NaN);
#elif __BYTE_ORDER==__LITTLE_ENDIAN
+ char c = *((char*)&x+7) & 0x7f;
+ uint64_t u = x;
+ *((char*)&u+7)=0;
+
#if DEBUG
mexPrintf("xpt2d(%016Lx): [0x%x]\n",x,c);
@@ -1067,15 +1068,15 @@ double xpt2d(uint64_t x) {
*/
uint64_t d2xpt(double x) {
- uint64_t s,m;
- int e;
-
#if __BYTE_ORDER == __BIG_ENDIAN
mexErrMsgTxt("IEEE-to-IBM conversion on big-endian platform not
supported, yet");
-
+ return(0x2eLL << 56); // NaN - not a number
#elif __BYTE_ORDER==__LITTLE_ENDIAN
+ uint64_t s,m;
+ int e;
+
if (x != x) return(0x2eLL << 56); // NaN - not a number
commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2015-07-12 22:52:58
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new (New)
Package is "octave-forge-nan"
Changes:
--- /work/SRC/openSUSE:Factory/octave-forge-nan/octave-forge-nan.changes
2015-06-30 10:18:07.0 +0200
+++ /work/SRC/openSUSE:Factory/.octave-forge-nan.new/octave-forge-nan.changes
2015-07-12 22:52:59.0 +0200
@@ -1,0 +2,6 @@
+Tue Jul 7 18:08:41 UTC 2015 - dmitr...@opensuse.org
+
+- Update to version 2.8.1
+ * Bugfix release
+
+---
Old:
nan-2.8.0.tar.gz
New:
nan-2.8.1.tar.gz
Other differences:
--
++ octave-forge-nan.spec ++
--- /var/tmp/diff_new_pack.lipXXn/_old 2015-07-12 22:53:00.0 +0200
+++ /var/tmp/diff_new_pack.lipXXn/_new 2015-07-12 22:53:00.0 +0200
@@ -18,7 +18,7 @@
%define octpkg nan
Name: octave-forge-%{octpkg}
-Version:2.8.0
+Version:2.8.1
Release:0
Summary:A statistics and machine learning toolbox
License:GPL-3.0+
++ nan-2.8.0.tar.gz -> nan-2.8.1.tar.gz ++
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/DESCRIPTION new/NaN/DESCRIPTION
--- old/NaN/DESCRIPTION 2015-06-24 14:53:57.0 +0200
+++ new/NaN/DESCRIPTION 2015-07-06 21:43:26.0 +0200
@@ -1,6 +1,6 @@
Name: NaN
-Version: 2.8.0
-Date: 2015-06-24
+Version: 2.8.1
+Date: 2015-07-06
Author: Alois Schloegl
Maintainer: Alois Schloegl
Title: The NaN-toolbox
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/NEWS new/NaN/NEWS
--- old/NaN/NEWS2015-06-24 14:53:35.0 +0200
+++ new/NaN/NEWS2015-07-06 21:42:45.0 +0200
@@ -1,4 +1,6 @@
-2015-06-18: Releae of NaN v2.7.7
+2015-07-06: Release of NaN-tb v2.8.1
+
+- fix nantest to avoid crashing octave 4.0.0 on windows
2015-06-24: Release of NaN-tb v2.8.0
@@ -6,9 +8,9 @@
(fixes #45363 and #44859)
- check for sparse input matrices and
- convert to full if needed
+ convert to full when needed
-2015-06-01: Release of NaN v2.7.6
+2015-06-01: Release of NaN v.2.7.6
- improve accuracy of normcdf (bug #38170)
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/VERSION new/NaN/VERSION
--- old/NaN/VERSION 2015-06-24 14:53:57.0 +0200
+++ new/NaN/VERSION 2015-07-06 21:43:26.0 +0200
@@ -1,3 +1,3 @@
# NaN-toolbox http://pub.ist.ac.at/~schloegl/matlab/NaN
-# Version: 2.8.0
-# Date: 2015-06-24
+# Version: 2.8.1
+# Date: 2015-07-06
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/inst/nantest.m new/NaN/inst/nantest.m
--- old/NaN/inst/nantest.m 2015-01-14 20:05:11.0 +0100
+++ new/NaN/inst/nantest.m 2015-07-02 23:04:17.0 +0200
@@ -24,7 +24,7 @@
%You should have received a copy of the GNU General Public License
%along with this program; If not, see
commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2015-06-30 10:18:06
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new (New)
Package is "octave-forge-nan"
Changes:
--- /work/SRC/openSUSE:Factory/octave-forge-nan/octave-forge-nan.changes
2015-06-16 15:12:42.0 +0200
+++ /work/SRC/openSUSE:Factory/.octave-forge-nan.new/octave-forge-nan.changes
2015-06-30 10:18:07.0 +0200
@@ -1,0 +2,9 @@
+Sat Jun 27 08:05:25 UTC 2015 - dmitr...@opensuse.org
+
+- Update to version 2.8.0
+ * check for sparse input matrices and convert to full if needed
+ * improve accuracy of normcdf (bug #38170)
+ * fix compiler issue with __isnan
+ * do not display diagnostic messages
+
+---
Old:
nan-2.7.4.tar.gz
New:
nan-2.8.0.tar.gz
Other differences:
--
++ octave-forge-nan.spec ++
--- /var/tmp/diff_new_pack.noymOz/_old 2015-06-30 10:18:08.0 +0200
+++ /var/tmp/diff_new_pack.noymOz/_new 2015-06-30 10:18:08.0 +0200
@@ -18,7 +18,7 @@
%define octpkg nan
Name: octave-forge-%{octpkg}
-Version:2.7.4
+Version:2.8.0
Release:0
Summary:A statistics and machine learning toolbox
License:GPL-3.0+
@@ -40,7 +40,7 @@
%prep
%setup -q -c %{name}-%{version}
-%patch1 -p1
+%patch1 -p0
%patch2 -p1
%octave_pkg_src
++ nan-2.7.4.tar.gz -> nan-2.8.0.tar.gz ++
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/DESCRIPTION new/NaN/DESCRIPTION
--- old/NaN/DESCRIPTION 2015-04-13 10:01:56.0 +0200
+++ new/NaN/DESCRIPTION 2015-06-24 14:53:57.0 +0200
@@ -1,6 +1,6 @@
Name: NaN
-Version: 2.7.4
-Date: 2015-04-13
+Version: 2.8.0
+Date: 2015-06-24
Author: Alois Schloegl
Maintainer: Alois Schloegl
Title: The NaN-toolbox
@@ -9,4 +9,4 @@
License: GPLv3+
Url: http://pub.ist.ac.at/~schloegl/matlab/NaN
Autoload: no
-SVNRelease: $Rev: 12780 $
+SVNRelease: $Rev: 12813 $
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/NEWS new/NaN/NEWS
--- old/NaN/NEWS2015-04-06 14:01:45.0 +0200
+++ new/NaN/NEWS2015-06-24 14:53:35.0 +0200
@@ -1,5 +1,25 @@
-2015-04-06
-- use libsvm and liblinear of target system, instead of outdated copy
+2015-06-18: Releae of NaN v2.7.7
+
+2015-06-24: Release of NaN-tb v2.8.0
+
+- fix Makefile for Octave4 on windows
+ (fixes #45363 and #44859)
+
+- check for sparse input matrices and
+ convert to full if needed
+
+2015-06-01: Release of NaN v2.7.6
+
+- improve accuracy of normcdf (bug #38170)
+
+2015-04-23: Release of NaN v2.7.5
+
+- fix compiler issue with __isnan
+- do not display diagnostic messages
+
+2015-04-12
+
+- upgrade to libsvm-3.12
- fix multi-threaded build (make -j)
- improve some tests
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/VERSION new/NaN/VERSION
--- old/NaN/VERSION 2015-04-13 10:01:56.0 +0200
+++ new/NaN/VERSION 2015-06-24 14:53:57.0 +0200
@@ -1,3 +1,3 @@
# NaN-toolbox http://pub.ist.ac.at/~schloegl/matlab/NaN
-# Version: 2.7.4
-# Date: 2015-04-13
+# Version: 2.8.0
+# Date: 2015-06-24
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/inst/covm.m new/NaN/inst/covm.m
--- old/NaN/inst/covm.m 2011-11-08 21:25:36.0 +0100
+++ new/NaN/inst/covm.m 2015-06-18 17:09:49.0 +0200
@@ -33,7 +33,7 @@
%
% see also: DECOVM, XCOVF
-% $Id: covm.m 9032 2011-11-08 20:25:36Z schloegl $
+% $Id: covm.m 12826 2015-06-18 15:09:49Z schloegl $
% Copyright (C) 2000-2005,2009 by Alois Schloegl
% This function is part of the NaN-toolbox
% http://pub.ist.ac.at/~schloegl/matlab/NaN/
@@ -143,6 +143,12 @@
end;
end;
+ if issparse(X) || issparse(Y),
+ fprintf(2,'sumskipnan: sparse matrix converted to full
matrix\n');
+ X=full(X);
+ Y=full(Y);
+ end;
+
[CC,NN] = covm_mex(real(X), real(Y), FLAG_NANS_OCCURED, W);
%% complex matrices
if ~isreal(X) && ~isreal(Y)
diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn'
'--exclude=.svnignore' old/NaN/inst/normcdf.m new/NaN/inst/normcdf.m
--- old/NaN/inst/normcdf.m 2011-11-08 21:58:07.0 +0100
+++ new/NaN/inst/normcdf.m 2015-06-01 08:10:55.0 +0200
@@ -12,7 +12,7 @@
% Reference(s):
-%$Id: normcdf.m 9033 2011-11-08 20:58:07Z schloegl $
+%$Id: n
commit octave-forge-nan for openSUSE:Factory
Hello community,
here is the log from the commit of package octave-forge-nan for
openSUSE:Factory checked in at 2015-06-16 15:12:42
Comparing /work/SRC/openSUSE:Factory/octave-forge-nan (Old)
and /work/SRC/openSUSE:Factory/.octave-forge-nan.new (New)
Package is "octave-forge-nan"
Changes:
New Changes file:
--- /dev/null 2015-05-15 19:41:08.266053825 +0200
+++ /work/SRC/openSUSE:Factory/.octave-forge-nan.new/octave-forge-nan.changes
2015-06-16 15:12:42.0 +0200
@@ -0,0 +1,19 @@
+---
+Thu Apr 16 22:21:07 UTC 2015 - dmitr...@opensuse.org
+
+- Update to version 2.7.4
+ * use libsvm and liblinear of target system, instead of outdated copy
+ * fix multi-threaded build (make -j)
+ * improve some tests
+ * bug fix in nanstd.m
+ * minor issues (some compiler warnings are addressed)
+
+---
+Thu Feb 26 16:06:43 UTC 2015 - dmitr...@opensuse.org
+
+- Split from octave-forge package, version 2.7.1
+- Fix build with OpenMP support
+ * nan-openmp.patch
+- Fix GCC warnings
+ * nan-gcc.patch
+
New:
nan-2.7.4.tar.gz
nan-gcc.patch
nan-openmp.patch
octave-forge-nan.changes
octave-forge-nan.spec
Other differences:
--
++ octave-forge-nan.spec ++
#
# spec file for package octave-forge-nan
#
# Copyright (c) 2015 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
# Please submit bugfixes or comments via http://bugs.opensuse.org/
#
%define octpkg nan
Name: octave-forge-%{octpkg}
Version:2.7.4
Release:0
Summary:A statistics and machine learning toolbox
License:GPL-3.0+
Group: Productivity/Scientific/Math
Url:http://octave.sourceforge.net
Source0:
http://downloads.sourceforge.net/octave/%{octpkg}-%{version}.tar.gz
# PATCH-FIX-UPSTREAM nan-openmp.patch -- Fix build with OpenMP support
Patch1: nan-openmp.patch
# PATCH-FIX-UPSTREAM nan-gcc.patch -- Fix GCC warnings
Patch2: nan-gcc.patch
BuildRequires: blas-devel
BuildRequires: gcc-c++
BuildRequires: octave-devel
Requires: octave-cli >= 3.2.0
%description
A statistics and machine learning toolbox for data with and w/o missing values.
This is part of Octave-Forge project.
%prep
%setup -q -c %{name}-%{version}
%patch1 -p1
%patch2 -p1
%octave_pkg_src
%build
%octave_pkg_build
%install
%octave_pkg_install
%check
%octave_pkg_test
%post
%octave --eval "pkg rebuild"
%postun
%octave --eval "pkg rebuild"
%files
%defattr(-,root,root)
%{octpackages_dir}/%{octpkg}-%{version}
%{octlib_dir}/%{octpkg}-%{version}
%changelog
++ nan-gcc.patch ++
Index: octave-forge-nan/NaN/src/str2array.cpp
===
--- octave-forge-nan.orig/NaN/src/str2array.cpp
+++ octave-forge-nan/NaN/src/str2array.cpp
@@ -126,6 +126,7 @@ int str2val(char *s, double *r, double *
// conversion failed
return(0);
}
+ return (0);
}
++ nan-openmp.patch ++
Index: octave-forge-nan/NaN/src/Makefile
===
--- octave-forge-nan.orig/NaN/src/Makefile
+++ octave-forge-nan/NaN/src/Makefile
@@ -33,8 +33,8 @@ GNUMEX64 = $(HOME)/bin/win64/gnumex
CC = gcc
CXX = g++
-CFLAGS = -fopenmp -Wall -Wextra -Wconversion -O2 -fPIC
-OCTMEX = mkoctfile$(OCTAVE_VERSION) --mex
+CFLAGS = -fopenmp -Wall -Wextra -Wconversion -O2 -fPIC -lgomp
+OCTMEX = mkoctfile$(OCTAVE_VERSION) --mex -lgomp
RM = rm
ifneq (Darwin,$(shell uname))
