[SCM] hdf5 branch, master, updated. upstream/1.8.7-160-g34469bb

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch:
commit 34469bba0c80bf463515355f18522748954eceb1
Author: Sylvestre Ledru sylvestre.le...@scilab-enterprises.com
Date:   Tue Jul 2 15:41:16 2013 +0200

  * Rollback upstream change from soname 7 = 8.
They only removed two functions which were unused and buggy.
I checked with them and they agree it was not worth changing the soname.

Upstream mail:
---
I checked with the developers to be sure it would be okay for you to plug
these functions back in and keep soname 7. The short answer is yes.

It seems that these APIs were broken and users would not or could not have
been using them. Therefore, adding them back in for the sake of 
distribution simplification should not have a negative effect on most (or all?) 
user
applications.

Rather than removing those APIs outright, we should have deprecated them and
removed them from the documentation, but not actually removed them from the 
software until the next major release. :|
---

(I am not planning to put these two functions back)

diff --git a/debian/changelog b/debian/changelog
index 2a4ef06..5e813f3 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,7 +1,9 @@
 hdf5 (1.8.11-1~exp1) experimental; urgency=low
 
   * New upstream release
-  * This new release will require a transition (7 = 8)
+  * Rollback upstream change from soname 7 = 8.
+They only removed two functions which were unused and buggy.
+I checked with them and they agree it was not worth changing the soname.
 
  -- Sylvestre Ledru sylves...@debian.org  Fri, 21 Jun 2013 13:50:29 +0200
 
diff --git a/debian/control b/debian/control
index 13f468d..8584388 100644
--- a/debian/control
+++ b/debian/control
@@ -13,7 +13,7 @@ Homepage: http://hdfgroup.org/HDF5/
 Vcs-Browser: http://git.debian.org/?p=pkg-grass/hdf5.git
 Vcs-Git: git://git.debian.org/git/pkg-grass/hdf5.git
 
-Package: libhdf5-8
+Package: libhdf5-7
 Section: libs
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
@@ -21,7 +21,7 @@ Pre-Depends: ${misc:Pre-Depends}
 Conflicts: libhdf5-7, libhdf5-1.8,
  libhdf5-1.8.4, libhdf5-serial-1.8.4, libhdf5-1.8.6, libhdf5-serial-1.8.6,
  libhdf5-1.8.7, libhdf5-serial-1.8.7
-Provides: libhdf5-8, libhdf5-1.8
+Provides: libhdf5-7, libhdf5-1.8
 Replaces: libhdf5-1.8.4, libhdf5-serial-1.8.4, libhdf5-1.8.6, 
libhdf5-serial-1.8.6, libhdf5-1.8.7, libhdf5-serial-1.8.7
 Multi-Arch: same
 Description: Hierarchical Data Format 5 (HDF5) - runtime files - serial version
@@ -32,12 +32,12 @@ Description: Hierarchical Data Format 5 (HDF5) - runtime 
files - serial version
  .
  This package contains runtime files for serial platforms.
 
-Package: libhdf5-8-dbg
+Package: libhdf5-7-dbg
 Section: debug
 Priority: extra
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends},
- libhdf5-8 (= ${binary:Version})
+ libhdf5-7 (= ${binary:Version})
 Description: Hierarchical Data Format 5 (HDF5) - Debug package
  HDF5 is a file format and library for storing scientific data.
  HDF5 was designed and implemented to address the deficiencies of
@@ -49,7 +49,7 @@ Description: Hierarchical Data Format 5 (HDF5) - Debug package
 Package: libhdf5-dev
 Section: libdevel
 Architecture: any
-Depends: libhdf5-8 (= ${binary:Version}), zlib1g-dev, libjpeg-dev,
+Depends: libhdf5-7 (= ${binary:Version}), zlib1g-dev, libjpeg-dev,
  ${misc:Depends}, hdf5-helpers
 Suggests: libhdf5-doc
 Provides: libhdf5-serial-dev
@@ -75,7 +75,7 @@ Description: Hierarchical Data Format 5 (HDF5) - development 
files - transitionn
  .
  This package is a transitionnal package.
 
-Package: libhdf5-openmpi-8
+Package: libhdf5-openmpi-7
 Section: libs
 Priority: extra
 Architecture: alpha armel armhf amd64 i386 ia64 powerpc powerpcspe ppc64 sparc 
kfreebsd-i386 kfreebsd-amd64 hurd-i386
@@ -84,7 +84,7 @@ Pre-Depends: ${misc:Pre-Depends}
 Conflicts: libhdf5-7, libhdf5-1.8,
  libhdf5-1.8.4, libhdf5-openmpi-1.8.4, libhdf5-1.8.6, libhdf5-openmpi-1.8.6,
  libhdf5-1.8.7, libhdf5-openmpi-1.8.7
-Provides: libhdf5-8, libhdf5-1.8
+Provides: libhdf5-7, libhdf5-1.8
 Replaces: libhdf5-1.8.4, libhdf5-openmpi-1.8.4, libhdf5-1.8.6, 
libhdf5-openmpi-1.8.6,
  libhdf5-1.8.7, libhdf5-openmpi-1.8.7
 Multi-Arch: same
@@ -100,7 +100,7 @@ Package: libhdf5-openmpi-dev
 Section: libdevel
 Priority: extra
 Architecture: alpha armel armhf amd64 i386 ia64 powerpc powerpcspe ppc64 sparc 
kfreebsd-i386 kfreebsd-amd64 hurd-i386
-Depends: libhdf5-openmpi-8 (= ${binary:Version}), zlib1g-dev,
+Depends: libhdf5-openmpi-7 (= ${binary:Version}), zlib1g-dev,
  libjpeg-dev, libopenmpi-dev, ${misc:Depends}, hdf5-helpers
 Conflicts: libhdf5-dev
 Provides: libhdf5-dev
@@ -113,12 +113,12 @@ Description: Hierarchical Data Format 5 (HDF5) - 
development files - OpenMPI ver
  .
  This package contains development files for use with OpenMPI.
 
-Package: libhdf5-openmpi-8-dbg
+Package: libhdf5-openmpi-7-dbg
 Section: debug
 Priority: extra
 

[SCM] hdf5 branch, master, updated. upstream/1.8.7-162-gfdfc778

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch:
commit 799396b3ad5c097e6c14bfd8939b603f113abefc
Author: Sylvestre Ledru sylvestre.le...@scilab-enterprises.com
Date:   Tue Jul 2 15:41:16 2013 +0200

  * Rollback upstream change from soname 7 = 8.
They only removed two functions which were unused and buggy.
I checked with them and they agree it was not worth changing the soname.

Upstream mail:
---
I checked with the developers to be sure it would be okay for you to plug
these functions back in and keep soname 7. The short answer is yes.

It seems that these APIs were broken and users would not or could not have
been using them. Therefore, adding them back in for the sake of 
distribution simplification should not have a negative effect on most (or all?) 
user
applications.

Rather than removing those APIs outright, we should have deprecated them and
removed them from the documentation, but not actually removed them from the 
software until the next major release. :|
---

(I am not planning to put these two functions back)

diff --git a/debian/changelog b/debian/changelog
index 2a4ef06..5e813f3 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,7 +1,9 @@
 hdf5 (1.8.11-1~exp1) experimental; urgency=low
 
   * New upstream release
-  * This new release will require a transition (7 = 8)
+  * Rollback upstream change from soname 7 = 8.
+They only removed two functions which were unused and buggy.
+I checked with them and they agree it was not worth changing the soname.
 
  -- Sylvestre Ledru sylves...@debian.org  Fri, 21 Jun 2013 13:50:29 +0200
 
diff --git a/debian/control b/debian/control
index 13f468d..e5352a2 100644
--- a/debian/control
+++ b/debian/control
@@ -13,7 +13,7 @@ Homepage: http://hdfgroup.org/HDF5/
 Vcs-Browser: http://git.debian.org/?p=pkg-grass/hdf5.git
 Vcs-Git: git://git.debian.org/git/pkg-grass/hdf5.git
 
-Package: libhdf5-8
+Package: libhdf5-7
 Section: libs
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
@@ -21,7 +21,7 @@ Pre-Depends: ${misc:Pre-Depends}
 Conflicts: libhdf5-7, libhdf5-1.8,
  libhdf5-1.8.4, libhdf5-serial-1.8.4, libhdf5-1.8.6, libhdf5-serial-1.8.6,
  libhdf5-1.8.7, libhdf5-serial-1.8.7
-Provides: libhdf5-8, libhdf5-1.8
+Provides: libhdf5-7, libhdf5-1.8
 Replaces: libhdf5-1.8.4, libhdf5-serial-1.8.4, libhdf5-1.8.6, 
libhdf5-serial-1.8.6, libhdf5-1.8.7, libhdf5-serial-1.8.7
 Multi-Arch: same
 Description: Hierarchical Data Format 5 (HDF5) - runtime files - serial version
@@ -32,12 +32,12 @@ Description: Hierarchical Data Format 5 (HDF5) - runtime 
files - serial version
  .
  This package contains runtime files for serial platforms.
 
-Package: libhdf5-8-dbg
+Package: libhdf5-7-dbg
 Section: debug
 Priority: extra
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends},
- libhdf5-8 (= ${binary:Version})
+ libhdf5-7 (= ${binary:Version})
 Description: Hierarchical Data Format 5 (HDF5) - Debug package
  HDF5 is a file format and library for storing scientific data.
  HDF5 was designed and implemented to address the deficiencies of
@@ -49,7 +49,7 @@ Description: Hierarchical Data Format 5 (HDF5) - Debug package
 Package: libhdf5-dev
 Section: libdevel
 Architecture: any
-Depends: libhdf5-8 (= ${binary:Version}), zlib1g-dev, libjpeg-dev,
+Depends: libhdf5-7 (= ${binary:Version}), zlib1g-dev, libjpeg-dev,
  ${misc:Depends}, hdf5-helpers
 Suggests: libhdf5-doc
 Provides: libhdf5-serial-dev
@@ -68,14 +68,14 @@ Section: libdevel
 Architecture: any
 Depends: libhdf5-dev (= ${binary:Version}), ${misc:Depends}
 Description: Hierarchical Data Format 5 (HDF5) - development files - 
transitionnal package
- HDF5 is a file format and library for storing scientific data. 
+ HDF5 is a file format and library for storing scientific data.
  HDF5 was designed and implemented to address the deficiencies of
  HDF4.x. It has a more powerful and flexible data model, supports
  files larger than 2 GB, and supports parallel I/O.
  .
  This package is a transitionnal package.
 
-Package: libhdf5-openmpi-8
+Package: libhdf5-openmpi-7
 Section: libs
 Priority: extra
 Architecture: alpha armel armhf amd64 i386 ia64 powerpc powerpcspe ppc64 sparc 
kfreebsd-i386 kfreebsd-amd64 hurd-i386
@@ -84,7 +84,7 @@ Pre-Depends: ${misc:Pre-Depends}
 Conflicts: libhdf5-7, libhdf5-1.8,
  libhdf5-1.8.4, libhdf5-openmpi-1.8.4, libhdf5-1.8.6, libhdf5-openmpi-1.8.6,
  libhdf5-1.8.7, libhdf5-openmpi-1.8.7
-Provides: libhdf5-8, libhdf5-1.8
+Provides: libhdf5-7, libhdf5-1.8
 Replaces: libhdf5-1.8.4, libhdf5-openmpi-1.8.4, libhdf5-1.8.6, 
libhdf5-openmpi-1.8.6,
  libhdf5-1.8.7, libhdf5-openmpi-1.8.7
 Multi-Arch: same
@@ -100,7 +100,7 @@ Package: libhdf5-openmpi-dev
 Section: libdevel
 Priority: extra
 Architecture: alpha armel armhf amd64 i386 ia64 powerpc powerpcspe ppc64 sparc 
kfreebsd-i386 kfreebsd-amd64 hurd-i386
-Depends: libhdf5-openmpi-8 (= ${binary:Version}), zlib1g-dev,
+Depends: 

[SCM] hdf5 branch, master, updated. upstream/1.8.7-162-gfdfc778

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch:
commit fdfc778c568d85a48386a8c55e75c7a72c0c8141
Merge: 799396b3ad5c097e6c14bfd8939b603f113abefc 
34469bba0c80bf463515355f18522748954eceb1
Author: Sylvestre Ledru sylvestre.le...@scilab-enterprises.com
Date:   Tue Jul 2 15:44:17 2013 +0200

Merge branch 'master' of git+ssh://git.debian.org/git/pkg-grass/hdf5

Conflicts:
debian/control


-- 
Hierarchical Data Format 5 (HDF5)

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[SCM] hdf5 branch, master, updated. upstream/1.8.7-165-gc52b044

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch:
commit 06f835a3f2275d96b20a5345cef6017f102a8dda
Author: Sylvestre Ledru sylvestre.le...@scilab-enterprises.com
Date:   Tue Jul 2 16:38:40 2013 +0200

refresh of the patches

diff --git a/debian/patches/path_max.diff b/debian/patches/path_max.diff
index d8d3466..2e2b0fc 100644
--- a/debian/patches/path_max.diff
+++ b/debian/patches/path_max.diff
@@ -1,7 +1,7 @@
-Index: hdf5-1.8.11/src/H5F.c
+Index: hdf5/src/H5F.c
 ===
 hdf5-1.8.11.orig/src/H5F.c 2013-06-21 14:04:50.332202606 +0200
-+++ hdf5-1.8.11/src/H5F.c  2013-06-21 14:04:50.332202606 +0200
+--- hdf5.orig/src/H5F.c2013-07-02 16:36:13.277603729 +0200
 hdf5/src/H5F.c 2013-07-02 16:36:13.273603730 +0200
 @@ -129,6 +129,10 @@
  }};
  
@@ -13,13 +13,13 @@ Index: hdf5-1.8.11/src/H5F.c
  
  /*-
   * Function:  H5F_init
-Index: hdf5-1.8.11/testpar/t_cache.c
+Index: hdf5/testpar/t_cache.c
 ===
 hdf5-1.8.11.orig/testpar/t_cache.c 2013-06-21 14:04:50.332202606 +0200
-+++ hdf5-1.8.11/testpar/t_cache.c  2013-06-21 14:04:50.332202606 +0200
-@@ -35,6 +35,10 @@
- 
- #include H5Fpkg.h
+--- hdf5.orig/testpar/t_cache.c2013-07-02 16:36:13.277603729 +0200
 hdf5/testpar/t_cache.c 2013-07-02 16:36:13.273603730 +0200
+@@ -39,6 +39,10 @@
+ #define PATH_MAX512
+ #endif  /* !PATH_MAX */
  
 +#ifndef PATH_MAX
 +#define PATH_MAX512
diff --git a/debian/patches/relax-version-check.patch 
b/debian/patches/relax-version-check.patch
index 49da78d..4c55d9c 100644
--- a/debian/patches/relax-version-check.patch
+++ b/debian/patches/relax-version-check.patch
@@ -6,10 +6,10 @@ Description: remove check on patch version
  access see e.g. H5F_ACC_RDONLY in src/H5Fpublic.h
 Author: Julian Taylor jtay...@ubuntu.com
 
-Index: hdf5-1.8.11/src/H5.c
+Index: hdf5/src/H5.c
 ===
 hdf5-1.8.11.orig/src/H5.c  2013-06-21 14:04:51.464202633 +0200
-+++ hdf5-1.8.11/src/H5.c   2013-06-21 14:04:51.464202633 +0200
+--- hdf5.orig/src/H5.c 2013-07-02 16:36:13.909603750 +0200
 hdf5/src/H5.c  2013-07-02 16:36:13.905603749 +0200
 @@ -666,8 +666,7 @@
  disable_version_check = (unsigned int)HDstrtol (s, NULL, 0);
  }
diff --git a/debian/patches/skip_cxx_inclusion.diff 
b/debian/patches/skip_cxx_inclusion.diff
index adba680..b84a5fa 100644
--- a/debian/patches/skip_cxx_inclusion.diff
+++ b/debian/patches/skip_cxx_inclusion.diff
@@ -1,7 +1,7 @@
-Index: hdf5-1.8.11/src/H5public.h
+Index: hdf5/src/H5public.h
 ===
 hdf5-1.8.11.orig/src/H5public.h2013-06-21 14:04:51.860202643 +0200
-+++ hdf5-1.8.11/src/H5public.h 2013-06-21 14:04:51.860202643 +0200
+--- hdf5.orig/src/H5public.h   2013-07-02 16:36:14.101603756 +0200
 hdf5/src/H5public.h2013-07-02 16:36:14.097603755 +0200
 @@ -58,6 +58,8 @@
  #   include stddef.h
  #endif
@@ -9,5 +9,5 @@ Index: hdf5-1.8.11/src/H5public.h
 +#   define MPICH_SKIP_MPICXX 1
 +#   define OMPI_SKIP_MPICXX 1
  #   include mpi.h
- #ifndef MPI_FILE_NULL /*MPIO may be defined in mpi.h already   */
- #   include mpio.h
+ #endif
+ 
diff --git a/debian/patches/soname.diff b/debian/patches/soname.diff
index 2ac379d..99d9589 100644
--- a/debian/patches/soname.diff
+++ b/debian/patches/soname.diff
@@ -1,7 +1,7 @@
 Index: hdf5/c++/src/Makefile.in
 ===
 hdf5.orig/c++/src/Makefile.in  2013-06-21 11:25:27.587954635 +0200
-+++ hdf5/c++/src/Makefile.in   2013-07-02 14:54:16.297409399 +0200
+--- hdf5.orig/c++/src/Makefile.in  2013-07-02 16:36:14.297603763 +0200
 hdf5/c++/src/Makefile.in   2013-07-02 16:36:14.289603762 +0200
 @@ -466,7 +466,7 @@
  
  # Add libtool shared library version numbers to the HDF5 library
@@ -13,8 +13,8 @@ Index: hdf5/c++/src/Makefile.in
  
 Index: hdf5/config/lt_vers.am
 ===
 hdf5.orig/config/lt_vers.am2013-06-21 11:25:27.591954634 +0200
-+++ hdf5/config/lt_vers.am 2013-07-02 14:54:29.865409829 +0200
+--- hdf5.orig/config/lt_vers.am2013-07-02 16:36:14.297603763 +0200
 hdf5/config/lt_vers.am 2013-07-02 16:36:14.289603762 +0200
 @@ -16,7 +16,7 @@
  ##
  # Add libtool shared library version numbers to the HDF5 library
@@ -26,8 +26,8 @@ Index: hdf5/config/lt_vers.am
  
 Index: hdf5/fortran/src/Makefile.in
 ===
 hdf5.orig/fortran/src/Makefile.in  2013-06-21 11:25:27.607954636 +0200
-+++ hdf5/fortran/src/Makefile.in   2013-07-02 14:54:13.145409297 +0200
+--- hdf5.orig/fortran/src/Makefile.in  2013-07-02 16:36:14.297603763 +0200
 

[SCM] hdf5 branch, master, updated. upstream/1.8.7-165-gc52b044

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch:
commit c52b044dffc7fbc350b61ce8538c61885ae9883c
Author: Sylvestre Ledru sylvestre.le...@scilab-enterprises.com
Date:   Tue Jul 2 17:31:15 2013 +0200

Refresh + prepare the upload

diff --git a/debian/changelog b/debian/changelog
index 5e813f3..00268ab 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,4 +1,4 @@
-hdf5 (1.8.11-1~exp1) experimental; urgency=low
+hdf5 (1.8.11-1) unstable; urgency=low
 
   * New upstream release
   * Rollback upstream change from soname 7 = 8.
diff --git a/debian/libhdf5-7.symbols b/debian/libhdf5-7.symbols
index f21a38e..1815ccf 100644
--- a/debian/libhdf5-7.symbols
+++ b/debian/libhdf5-7.symbols
@@ -524,7 +524,6 @@ libhdf5.so.7 libhdf5-7
  H5FD_init@Base 1.8.7
  H5FD_log_init@Base 1.8.7
  H5FD_log_term@Base 1.8.7
-#MISSING: 1.8.11-1~exp1# H5FD_mpi_native_g@Base 1.8.7
  H5FD_multi_init@Base 1.8.7
  H5FD_multi_term@Base 1.8.7
  H5FD_open@Base 1.8.7
@@ -1510,7 +1509,6 @@ libhdf5.so.7 libhdf5-7
  H5Pget_data_transform@Base 1.8.7
  H5Pget_driver@Base 1.8.7
  H5Pget_driver_info@Base 1.8.7
-#MISSING: 1.8.11-1~exp1# H5Pget_dxpl_multi@Base 1.8.7
  H5Pget_edc_check@Base 1.8.7
  H5Pget_elink_acc_flags@Base 1.8.7
  H5Pget_elink_cb@Base 1.8.7
@@ -1587,7 +1585,6 @@ libhdf5.so.7 libhdf5-7
  H5Pset_data_transform@Base 1.8.7
  H5Pset_deflate@Base 1.8.7
  H5Pset_driver@Base 1.8.7
-#MISSING: 1.8.11-1~exp1# H5Pset_dxpl_multi@Base 1.8.7
  H5Pset_edc_check@Base 1.8.7
  H5Pset_elink_acc_flags@Base 1.8.7
  H5Pset_elink_cb@Base 1.8.7
@@ -2475,10 +2472,8 @@ libhdf5_cpp.so.7 libhdf5-7 #MINVER#
  (optional)_ZN2H511IdComponentD1Ev@Base 1.8.9
  (optional)_ZN2H511IdComponentD2Ev@Base 1.8.9
  (optional)_ZN2H511IdComponentaSERKS0_@Base 1.8.9
- _ZN2H514FileIExceptionC1ERKS0_@Base 1.8.11-1~exp1
  (optional)_ZN2H514FileIExceptionC1ERKSsS2_@Base 1.8.9
  (optional)_ZN2H514FileIExceptionC1Ev@Base 1.8.9
- _ZN2H514FileIExceptionC2ERKS0_@Base 1.8.11-1~exp1
  (optional)_ZN2H514FileIExceptionC2ERKSsS2_@Base 1.8.9
  (optional)_ZN2H514FileIExceptionC2Ev@Base 1.8.9
  (optional)_ZN2H514FileIExceptionD0Ev@Base 1.8.9
@@ -2519,10 +2514,8 @@ libhdf5_cpp.so.7 libhdf5-7 #MINVER#
  (optional)_ZN2H517DSetCreatPropListD0Ev@Base 1.8.9
  (optional)_ZN2H517DSetCreatPropListD1Ev@Base 1.8.9
  (optional)_ZN2H517DSetCreatPropListD2Ev@Base 1.8.9
- (optional)_ZN2H517DataSetIExceptionC1ERKS0_@Base 1.8.9
  (optional)_ZN2H517DataSetIExceptionC1ERKSsS2_@Base 1.8.9
  (optional)_ZN2H517DataSetIExceptionC1Ev@Base 1.8.9
- (optional)_ZN2H517DataSetIExceptionC2ERKS0_@Base 1.8.9
  (optional)_ZN2H517DataSetIExceptionC2ERKSsS2_@Base 1.8.9
  (optional)_ZN2H517DataSetIExceptionC2Ev@Base 1.8.9
  (optional)_ZN2H517DataSetIExceptionD0Ev@Base 1.8.9
@@ -2545,10 +2538,8 @@ libhdf5_cpp.so.7 libhdf5-7 #MINVER#
  (optional)_ZN2H517LibraryIExceptionD0Ev@Base 1.8.9
  (optional)_ZN2H517LibraryIExceptionD1Ev@Base 1.8.9
  (optional)_ZN2H517LibraryIExceptionD2Ev@Base 1.8.9
- (optional)_ZN2H518DataTypeIExceptionC1ERKS0_@Base 1.8.9
  (optional)_ZN2H518DataTypeIExceptionC1ERKSsS2_@Base 1.8.9
  (optional)_ZN2H518DataTypeIExceptionC1Ev@Base 1.8.9
- (optional)_ZN2H518DataTypeIExceptionC2ERKS0_@Base 1.8.9
  (optional)_ZN2H518DataTypeIExceptionC2ERKSsS2_@Base 1.8.9
  (optional)_ZN2H518DataTypeIExceptionC2Ev@Base 1.8.9
  (optional)_ZN2H518DataTypeIExceptionD0Ev@Base 1.8.9
@@ -2561,19 +2552,15 @@ libhdf5_cpp.so.7 libhdf5-7 #MINVER#
  (optional)_ZN2H518PropListIExceptionD0Ev@Base 1.8.9
  (optional)_ZN2H518PropListIExceptionD1Ev@Base 1.8.9
  (optional)_ZN2H518PropListIExceptionD2Ev@Base 1.8.9
- (optional)_ZN2H518ReferenceExceptionC1ERKS0_@Base 1.8.9
  (optional)_ZN2H518ReferenceExceptionC1ERKSsS2_@Base 1.8.9
  (optional)_ZN2H518ReferenceExceptionC1Ev@Base 1.8.9
- (optional)_ZN2H518ReferenceExceptionC2ERKS0_@Base 1.8.9
  (optional)_ZN2H518ReferenceExceptionC2ERKSsS2_@Base 1.8.9
  (optional)_ZN2H518ReferenceExceptionC2Ev@Base 1.8.9
  (optional)_ZN2H518ReferenceExceptionD0Ev@Base 1.8.9
  (optional)_ZN2H518ReferenceExceptionD1Ev@Base 1.8.9
  (optional)_ZN2H518ReferenceExceptionD2Ev@Base 1.8.9
- (optional)_ZN2H519AttributeIExceptionC1ERKS0_@Base 1.8.9
  (optional)_ZN2H519AttributeIExceptionC1ERKSsS2_@Base 1.8.9
  (optional)_ZN2H519AttributeIExceptionC1Ev@Base 1.8.9
- (optional)_ZN2H519AttributeIExceptionC2ERKS0_@Base 1.8.9
  (optional)_ZN2H519AttributeIExceptionC2ERKSsS2_@Base 1.8.9
  (optional)_ZN2H519AttributeIExceptionC2Ev@Base 1.8.9
  (optional)_ZN2H519AttributeIExceptionD0Ev@Base 1.8.9
@@ -2586,8 +2573,6 @@ libhdf5_cpp.so.7 libhdf5-7 #MINVER#
  (optional)_ZN2H519DSetMemXferPropList21getSmallDataBlockSizeEv@Base 1.8.9
  (optional)_ZN2H519DSetMemXferPropList21setSmallDataBlockSizeEy@Base 1.8.9
  (optional)_ZN2H519DSetMemXferPropList7DEFAULTE@Base 1.8.9
-#MISSING: 1.8.11-1~exp1# 
(optional)_ZN2H519DSetMemXferPropList8getMultiEPi@Base 1.8.9
-#MISSING: 1.8.11-1~exp1# 
(optional)_ZN2H519DSetMemXferPropList8setMultiEPKi@Base 1.8.9
  (optional)_ZN2H519DSetMemXferPropListC1ERKS0_@Base 1.8.9
  

[SCM] hdf5 branch, master, updated. upstream/1.8.7-165-gc52b044

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch:
commit 101c2671db75c0017040f0d33788e54b422493dd
Author: Sylvestre Ledru sylvestre.le...@scilab-enterprises.com
Date:   Tue Jul 2 16:38:27 2013 +0200

match upstream tarball

diff --git a/src/H5Tconv.c b/src/H5Tconv.c
index c5a24c4..4e8a88d 100644
--- a/src/H5Tconv.c
+++ b/src/H5Tconv.c
@@ -8597,6 +8597,7 @@ H5T__conv_float_llong (hid_t src_id, hid_t dst_id, 
H5T_cdata_t *cdata,
  *
  *-
  */
+#if H5T_CONV_INTERNAL_FP_ULLONG
 herr_t
 H5T__conv_float_ullong (hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
   size_t nelmts, size_t buf_stride,
@@ -8605,6 +8606,7 @@ H5T__conv_float_ullong (hid_t src_id, hid_t dst_id, 
H5T_cdata_t *cdata,
 {
 H5T_CONV_Fx(FLOAT, ULLONG, float, unsigned long long, 0, ULLONG_MAX);
 }
+#endif /*H5T_CONV_INTERNAL_FP_ULLONG*/
 
 
 /*-
@@ -8649,6 +8651,7 @@ H5T__conv_double_llong (hid_t src_id, hid_t dst_id, 
H5T_cdata_t *cdata,
  *
  *-
  */
+#if H5T_CONV_INTERNAL_FP_ULLONG
 herr_t
 H5T__conv_double_ullong (hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
   size_t nelmts, size_t buf_stride,
@@ -8657,6 +8660,7 @@ H5T__conv_double_ullong (hid_t src_id, hid_t dst_id, 
H5T_cdata_t *cdata,
 {
 H5T_CONV_Fx(DOUBLE, ULLONG, double, unsigned long long, 0, ULLONG_MAX);
 }
+#endif /*H5T_CONV_INTERNAL_FP_ULLONG*/
 
 
 /*-
@@ -8701,6 +8705,7 @@ H5T__conv_ldouble_llong (hid_t src_id, hid_t dst_id, 
H5T_cdata_t *cdata,
  *
  *-
  */
+#if H5T_CONV_INTERNAL_LDOUBLE_ULLONG
 herr_t
 H5T__conv_ldouble_ullong (hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
   size_t nelmts, size_t buf_stride,
@@ -8709,6 +8714,7 @@ H5T__conv_ldouble_ullong (hid_t src_id, hid_t dst_id, 
H5T_cdata_t *cdata,
 {
 H5T_CONV_Fx(LDOUBLE, ULLONG, long double, unsigned long long, 0, 
ULLONG_MAX);
 }
+#endif /*H5T_CONV_INTERNAL_LDOUBLE_ULLONG*/
 
 
 /*-
diff --git a/src/H5public.h b/src/H5public.h
index 3f0624c..b022ca7 100644
--- a/src/H5public.h
+++ b/src/H5public.h
@@ -59,6 +59,9 @@
 #endif
 #ifdef H5_HAVE_PARALLEL
 #   include mpi.h
+#ifndef MPI_FILE_NULL  /*MPIO may be defined in mpi.h already   */
+#   include mpio.h
+#endif
 #endif
 
 
diff --git a/testpar/t_cache.c b/testpar/t_cache.c
index 6a4893a..234df01 100644
--- a/testpar/t_cache.c
+++ b/testpar/t_cache.c
@@ -35,10 +35,6 @@
 
 #include H5Fpkg.h
 
-#ifndef PATH_MAX
-#define PATH_MAX512
-#endif  /* !PATH_MAX */
-
 
 intnerrors = 0;
 intfailures = 0;

-- 
Hierarchical Data Format 5 (HDF5)

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Processing of hdf5_1.8.11-1_amd64.changes

2013-07-02 Thread Debian FTP Masters
hdf5_1.8.11-1_amd64.changes uploaded successfully to localhost
along with the files:
  hdf5_1.8.11-1.dsc
  hdf5_1.8.11.orig.tar.gz
  hdf5_1.8.11-1.debian.tar.gz
  libhdf5-doc_1.8.11-1_all.deb
  libhdf5-7_1.8.11-1_amd64.deb
  libhdf5-7-dbg_1.8.11-1_amd64.deb
  libhdf5-dev_1.8.11-1_amd64.deb
  libhdf5-serial-dev_1.8.11-1_amd64.deb
  libhdf5-openmpi-7_1.8.11-1_amd64.deb
  libhdf5-openmpi-dev_1.8.11-1_amd64.deb
  libhdf5-openmpi-7-dbg_1.8.11-1_amd64.deb
  libhdf5-mpich2-7_1.8.11-1_amd64.deb
  libhdf5-mpich2-dev_1.8.11-1_amd64.deb
  libhdf5-mpich2-7-dbg_1.8.11-1_amd64.deb
  libhdf5-mpi-dev_1.8.11-1_amd64.deb
  hdf5-helpers_1.8.11-1_amd64.deb
  hdf5-tools_1.8.11-1_amd64.deb

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hdf5_1.8.11-1_amd64.changes ACCEPTED into unstable

2013-07-02 Thread Debian FTP Masters


Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA1

Format: 1.8
Date: Fri, 21 Jun 2013 13:50:29 +0200
Source: hdf5
Binary: libhdf5-7 libhdf5-7-dbg libhdf5-dev libhdf5-serial-dev 
libhdf5-openmpi-7 libhdf5-openmpi-dev libhdf5-openmpi-7-dbg libhdf5-mpich2-7 
libhdf5-mpich2-dev libhdf5-mpich2-7-dbg libhdf5-mpi-dev libhdf5-doc 
hdf5-helpers hdf5-tools
Architecture: source all amd64
Version: 1.8.11-1
Distribution: unstable
Urgency: low
Maintainer: Debian GIS Project pkg-grass-devel@lists.alioth.debian.org
Changed-By: Sylvestre Ledru sylves...@debian.org
Description: 
 hdf5-helpers - Hierarchical Data Format 5 (HDF5) - Helper tools
 hdf5-tools - Hierarchical Data Format 5 (HDF5) - Runtime tools
 libhdf5-7  - Hierarchical Data Format 5 (HDF5) - runtime files - serial versio
 libhdf5-7-dbg - Hierarchical Data Format 5 (HDF5) - Debug package
 libhdf5-dev - Hierarchical Data Format 5 (HDF5) - development files - serial ve
 libhdf5-doc - Hierarchical Data Format 5 (HDF5) - Documentation
 libhdf5-mpi-dev - Hierarchical Data Format 5 (HDF5) - development files - 
MPICH2 ve
 libhdf5-mpich2-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH2 
versio
 libhdf5-mpich2-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich2 Debug package
 libhdf5-mpich2-dev - Hierarchical Data Format 5 (HDF5) - development files - 
MPICH2 ve
 libhdf5-openmpi-7 - Hierarchical Data Format 5 (HDF5) - runtime files - 
OpenMPI versi
 libhdf5-openmpi-7-dbg - Hierarchical Data Format 5 (HDF5) - OpenMPI Debug 
package
 libhdf5-openmpi-dev - Hierarchical Data Format 5 (HDF5) - development files - 
OpenMPI v
 libhdf5-serial-dev - Hierarchical Data Format 5 (HDF5) - development files - 
transitio
Changes: 
 hdf5 (1.8.11-1) unstable; urgency=low
 .
   * New upstream release
   * Rollback upstream change from soname 7 = 8.
 They only removed two functions which were unused and buggy.
 I checked with them and they agree it was not worth changing the soname.
Checksums-Sha1: 
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libgrits 0.8.1-1 MIGRATED to testing

2013-07-02 Thread Debian testing watch
FYI: The status of the libgrits source package
in Debian's testing distribution has changed.

  Previous version: 0.7-1
  Current version:  0.8.1-1

-- 
This email is automatically generated once a day.  As the installation of
new packages into testing happens multiple times a day you will receive
later changes on the next day.
See http://release.debian.org/testing-watch/ for more information.

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Processing of totalopenstation_0.3-3~bpo70+1_amd64.changes

2013-07-02 Thread Debian FTP Masters
totalopenstation_0.3-3~bpo70+1_amd64.changes uploaded successfully to localhost
along with the files:
  totalopenstation_0.3-3~bpo70+1.dsc
  totalopenstation_0.3-3~bpo70+1.debian.tar.gz
  totalopenstation_0.3-3~bpo70+1_all.deb

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totalopenstation_0.3-3~bpo70+1_amd64.changes REJECTED

2013-07-02 Thread Debian FTP Masters


ACL dm: NEW uploads are not allowed

===

Please feel free to respond to this email if you don't understand why
your files were rejected, or if you upload new files which address our
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