Source: cdk Version: 1:1.2.10-4 Severity: serious Tags: jessie sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20130922 qa-ftbfs Justification: FTBFS on amd64
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > compile-module: > [echo] Compiling classes for CDK's extra module from src/main... > [echo] Datafiles defined: true > [echo] Extra files defined: ${module.extrafiles.present} > [echo] CDK dependencies defined: true > [echo] Library dependencies defined: true > [echo] Developer Library dependencies defined: > ${module.devellibdepends.present} > [echo] Autogenerated files specified: ${module.autogenerated.present} > [mkdir] Created dir: /«PKGBUILDDIR»/build/src/extra > [mkdir] Created dir: /«PKGBUILDDIR»/build/extra > [copy] Copying 79 files to /«PKGBUILDDIR»/build/src/extra > [javac] Compiling 79 source files to /«PKGBUILDDIR»/build/extra > [javac] warning: [options] bootstrap class path not set in conjunction > with -source 1.5 > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/geometry/alignment/KabschAlignment.java:34: > error: package Jama does not exist > [javac] import Jama.EigenvalueDecomposition; > [javac] ^ > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/geometry/alignment/KabschAlignment.java:35: > error: package Jama does not exist > [javac] import Jama.Matrix; > [javac] ^ > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/geometry/alignment/KabschAlignment.java:290: > error: cannot find symbol > [javac] Matrix tmp; > [javac] ^ > [javac] symbol: class Matrix > [javac] location: class KabschAlignment > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/geometry/alignment/KabschAlignment.java:329: > error: cannot find symbol > [javac] tmp = new Matrix(tR); > [javac] ^ > [javac] symbol: class Matrix > [javac] location: class KabschAlignment > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/geometry/alignment/KabschAlignment.java:335: > error: cannot find symbol > [javac] Matrix jamaR = new Matrix(R); > [javac] ^ > [javac] symbol: class Matrix > [javac] location: class KabschAlignment > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/geometry/alignment/KabschAlignment.java:335: > error: cannot find symbol > [javac] Matrix jamaR = new Matrix(R); > [javac] ^ > [javac] symbol: class Matrix > [javac] location: class KabschAlignment > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/geometry/alignment/KabschAlignment.java:340: > error: cannot find symbol > [javac] Matrix jamaRtR = new Matrix(RtR); > [javac] ^ > [javac] symbol: class Matrix > [javac] location: class KabschAlignment > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/geometry/alignment/KabschAlignment.java:340: > error: cannot find symbol > [javac] Matrix jamaRtR = new Matrix(RtR); > [javac] ^ > [javac] symbol: class Matrix > [javac] location: class KabschAlignment > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/geometry/alignment/KabschAlignment.java:341: > error: cannot find symbol > [javac] EigenvalueDecomposition ed = jamaRtR.eig(); > [javac] ^ > [javac] symbol: class EigenvalueDecomposition > [javac] location: class KabschAlignment > [javac] > /«PKGBUILDDIR»/build/src/extra/org/openscience/cdk/validate/BasicValidator.java:321: > warning: [deprecation] getBondOrderSum(IAtom) in AtomContainer has been > deprecated > [javac] int bos = (int)molecule.getBondOrderSum(atom); > [javac] ^ > [javac] Note: Some input files use unchecked or unsafe operations. > [javac] Note: Recompile with -Xlint:unchecked for details. > [javac] 9 errors > [javac] 2 warnings > > BUILD FAILED > /«PKGBUILDDIR»/build.xml:529: The following error occurred while executing > this line: > /«PKGBUILDDIR»/build.xml:367: Compile failed; see the compiler error output > for details. > > Total time: 41 seconds > make: *** [debian/stamp-ant-build] Error 1 The full build log is available from: http://aws-logs.debian.net/ftbfs-logs/2013/09/22/cdk_1.2.10-4_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures. __ This is the maintainer address of Debian's Java team <http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-java-maintainers>. Please use debian-j...@lists.debian.org for discussions and questions.