[PyMOL] New PyMOL plugin for analysis of biomolecular channels

2013-09-17 Thread Lukáš Pravda
Dear PyMOL user,

 

we would like to inform you that there's a new PyMOL plugin available. The
plugin incorporates a functionality of the new tool MOLE 2.0 for detection
and analysis of channels, pores and cavities in biomacromolecules. Further
information with appropriate links to the publication and other details of
this tool can be found at the pymolwiki here
http://pymolwiki.org/index.php/MOLE_2.0:_advanced_approach_for_analysis_of_
biomacromolecular_channels .

 

Best Regards 

 

MOLE 2.0 authors

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[PyMOL] Guessing bonds for a chempy model.

2013-09-17 Thread Raúl Mera Adasme
Hi all,

I want to load a chempy model into PyMOL. Unfortunately, the model has
all the coordinate information, but not bonds defined.
I know PyMOL can guess the bonds from the distances, but it does not
do it if I just use cmd.load_model, and I could not find a way of
doing it.

Does anyone know how can I achieve this?

Thanks!



Raul

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