[PyMOL] translucent proteins

[Lesley Debono]

I would like to be able to make the backbone protein in a structure 
translucent so that the active site is clearly visible through the 
protein. Any ideas on how to do this?


Lesley

[PyMOL] working directory

[Lesley Debono]

i have pymol installed on an OSX machine. When I begin pymol i am in 
the root ("\") directory. My scripts are in a different directory. Is 
there a way I can begin in another directory when starting Pymol?


cheers
Lesley