[PyMOL] Finding parameter settings in old PyMol session

2009-03-31 Thread Wulf Blankenfeldt

Hi all,

I need to make a set of figures with a protein having different ligands 
bound to the active site. I already have a few of them finished and now 
I want to make the rest in a similar (identical) way.


Unfortunately, I have forgotten how I set sphere_scale, stick_radius and 
the like for a few of the things I am showing, and I have varied these 
settings for different parts of the plot - is there a way to get these 
parameters listed from the old session file (which I kept)?


Thanks in advance,


Wulf




Re: [PyMOL] Finding parameter settings in old PyMol session

2009-03-31 Thread Andreas Förster

Hey Wulf,

after firing up your old session, you should be able to extract any 
setting by typing 'get setting', e.g. 'get stick_radius' or 'get 
sphere_scale'.


Also, think about saving important PyMOL work as pml scripts.  I find 
them much easier to handle.



Andreas



Wulf Blankenfeldt wrote:

Hi all,

I need to make a set of figures with a protein having different ligands 
bound to the active site. I already have a few of them finished and now 
I want to make the rest in a similar (identical) way.


Unfortunately, I have forgotten how I set sphere_scale, stick_radius and 
the like for a few of the things I am showing, and I have varied these 
settings for different parts of the plot - is there a way to get these 
parameters listed from the old session file (which I kept)?


Thanks in advance,


Wulf


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Andreas Förster, Research Associate
Paul Freemont  Xiaodong Zhang Labs
Department of Biochemistry, Imperial College London
http://www.msf.bio.ic.ac.uk