Re: [PyMOL] Select different set of atoms in different molecules
It helped a lot, thank you very much. Alessia On 5 September 2013 22:20, Bernhard Lechtenberg blechtenb...@sanfordburnham.org wrote: Hi Allesia, I am not quite sure how to want to select the atoms, but if you want to have the selected atoms of both m1 and m2 in the same selection (here s1), then try this: select s1, (m1 and id 1-3) or (m2 and id 7-9) if you want two different selections, just do select s1, m1 and id 1-3 select s2, m2 and id 7-9 Hope that helps, Bernhard On Sep 5, 2013, at 12:40 PM, Alessia Visconti alessia.visco...@gmail.com wrote: Dear pyMOL users, I'm puzzled about how to solve an apparently simple task. I loaded on PyMOL two molecules (e.g., m1 and m2) and I wanted to select two different sets of atoms from each of them. Let's say I want to select atoms [1,2,3] from m1 and and atoms [7,8,9] from m2. I tried several combinations of load and select, but no option worked. The last selection is always applied to both molecules. I also Googled it, without any success. Does anyone know if its possible to make a selection in isolation over a given molecule? Any suggestion will be highly appreciated! Thanks in advance, Alessia -- Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! Discover the easy way to master current and previous Microsoft technologies and advance your career. Get an incredible 1,500+ hours of step-by-step tutorial videos with LearnDevNow. Subscribe today and save! http://pubads.g.doubleclick.net/gampad/clk?id=58041391iu=/4140/ostg.clktrk___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! Discover the easy way to master current and previous Microsoft technologies and advance your career. Get an incredible 1,500+ hours of step-by-step tutorial videos with LearnDevNow. Subscribe today and save! http://pubads.g.doubleclick.net/gampad/clk?id=58041391iu=/4140/ostg.clktrk___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] Select different set of atoms in different molecules
Dear pyMOL users, I'm puzzled about how to solve an apparently simple task. I loaded on PyMOL two molecules (e.g., m1 and m2) and I wanted to select two different sets of atoms from each of them. Let's say I want to select atoms [1,2,3] from m1 and and atoms [7,8,9] from m2. I tried several combinations of load and select, but no option worked. The last selection is always applied to both molecules. I also Googled it, without any success. Does anyone know if its possible to make a selection in isolation over a given molecule? Any suggestion will be highly appreciated! Thanks in advance, Alessia -- Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! Discover the easy way to master current and previous Microsoft technologies and advance your career. Get an incredible 1,500+ hours of step-by-step tutorial videos with LearnDevNow. Subscribe today and save! http://pubads.g.doubleclick.net/gampad/clk?id=58041391iu=/4140/ostg.clktrk___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Select different set of atoms in different molecules
Hi Allesia, I am not quite sure how to want to select the atoms, but if you want to have the selected atoms of both m1 and m2 in the same selection (here s1), then try this: select s1, (m1 and id 1-3) or (m2 and id 7-9) if you want two different selections, just do select s1, m1 and id 1-3 select s2, m2 and id 7-9 Hope that helps, Bernhard On Sep 5, 2013, at 12:40 PM, Alessia Visconti alessia.visco...@gmail.com wrote: Dear pyMOL users, I'm puzzled about how to solve an apparently simple task. I loaded on PyMOL two molecules (e.g., m1 and m2) and I wanted to select two different sets of atoms from each of them. Let's say I want to select atoms [1,2,3] from m1 and and atoms [7,8,9] from m2. I tried several combinations of load and select, but no option worked. The last selection is always applied to both molecules. I also Googled it, without any success. Does anyone know if its possible to make a selection in isolation over a given molecule? Any suggestion will be highly appreciated! Thanks in advance, Alessia -- Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! Discover the easy way to master current and previous Microsoft technologies and advance your career. Get an incredible 1,500+ hours of step-by-step tutorial videos with LearnDevNow. Subscribe today and save! http://pubads.g.doubleclick.net/gampad/clk?id=58041391iu=/4140/ostg.clktrk___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! Discover the easy way to master current and previous Microsoft technologies and advance your career. Get an incredible 1,500+ hours of step-by-step tutorial videos with LearnDevNow. Subscribe today and save! http://pubads.g.doubleclick.net/gampad/clk?id=58041391iu=/4140/ostg.clktrk ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Select different set of atoms in different molecules
What about the following commands: select mystuff, resi 1-3 and m1 select otherstuff, resi 7-9 and m2 Cheers, ___ Roger S. Rowlett Gordon Dorothy Kline Professor Department of Chemistry Colgate University 13 Oak Drive Hamilton, NY 13346 tel: (315)-228-7245 ofc: (315)-228-7395 fax: (315)-228-7935 email: rrowl...@colgate.edu On 9/5/2013 3:40 PM, Alessia Visconti wrote: Dear pyMOL users, I'm puzzled about how to solve an apparently simple task. I loaded on PyMOL two molecules (e.g., m1 and m2) and I wanted to select two different sets of atoms from each of them. Let's say I want to select atoms [1,2,3] from m1 and and atoms [7,8,9] from m2. I tried several combinations of load and select, but no option worked. The last selection is always applied to both molecules. I also Googled it, without any success. Does anyone know if its possible to make a selection in isolation over a given molecule? Any suggestion will be highly appreciated! Thanks in advance, Alessia -- Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! Discover the easy way to master current and previous Microsoft technologies and advance your career. Get an incredible 1,500+ hours of step-by-step tutorial videos with LearnDevNow. Subscribe today and save! http://pubads.g.doubleclick.net/gampad/clk?id=58041391iu=/4140/ostg.clktrk ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Learn the latest--Visual Studio 2012, SharePoint 2013, SQL 2012, more! Discover the easy way to master current and previous Microsoft technologies and advance your career. Get an incredible 1,500+ hours of step-by-step tutorial videos with LearnDevNow. Subscribe today and save! http://pubads.g.doubleclick.net/gampad/clk?id=58041391iu=/4140/ostg.clktrk___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
