OFFICIAL
Hi
Any help with the following update to my package PHEindicatormethods would be
appreciated.
I have made a very minor change to the package to fix dependencies on the
tidyr:nest() function as tidyr v 1.0.0 is due to be released with breaking
changes on 9th September.
The version I am trying to upload to CRAN is 1.1.5 available here:
https://github.com/PublicHealthEngland/PHEindicatormethods
When I run devtools::check_win_devel locally (Windows 10 laptop, R 3.6.1,
rStudio 1.2.1335) it passes with no NOTES, ERRORS or WARNINGS (locally it also
passes devtools::check_win on release and oldrelease and devtools::check_rhub)
When I submit to CRAN I have been notified that package
PHEindicatormethods_1.1.5.tar.gz does not pass the incoming checks
automatically, signposting failing pre-tests on Windows:
* using R Under development (unstable) (2019-09-02 r77130)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
This is the log file available for 7 days:
https://win-builder.r-project.org/incoming_pretest/PHEindicatormethods_1.1.5_20190905_224346/Windows/00check.log
Below are two sections from the log that show the errors:
> library('PHEindicatormethods')
Error: package or namespace load failed for 'PHEindicatormethods' in
loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
there is no package called 'broom'
Execution halted
** running examples for arch 'x64' ... ERROR
Running examples in 'PHEindicatormethods-Ex.R' failed
The error occurred in:
R Under development (unstable) (2019-09-02 r77130) -- "Unsuffered Consequences"
Copyright (C) 2019 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
Error: processing vignette 'WorkedExamples_phe_sii.Rmd' failed with diagnostics:
package or namespace load failed for 'PHEindicatormethods' in loadNamespace(i,
c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
there is no package called 'broom'
--- failed re-building 'WorkedExamples_phe_sii.Rmd'
SUMMARY: processing the following file failed:
'WorkedExamples_phe_sii.Rmd'
Error: Vignette re-building failed.
Execution halted
I have checked the broom package and its upstream dependency on generics - I
notice the tidy() function was moved from broom to generics a while back but
this was before I submitted the current version (1.1.3) of my package to CRAN
so not sure this can be the problem, although one of my functions does
reference broom::tidy(). The evidence seems to point to changes in R-devel
causing something in my package to break but without being able to reproduce
the errors seen by CRAN I'm finding it difficult to pinpoint the problem.
Thanks
Georgie
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