Re: [Rd] reverse dependency checks
Am Donnerstag, 18. Februar 2021, 22:36:38 CET schrieb Johannes Ranke: > Am Donnerstag, 18. Februar 2021, 19:58:09 CET schrieb Therneau, Terry M., > ... > > checks for survival that I'm not sure how to fix. If anyone has a hint > > or two I'd be grateful. > > > > 1. A half dozen fail with "graphics API mismatch" > > Such error messages could occur if visual diffs (of SVG plots) are run I was not thinking clearly enought yesterday night (I hope I am this morning...). These error message you are known to occur if a graphics package such as svglite [1] has to be reinstalled. The error message has also been associated [2] to the issue I was referring to, but I am not sure this is correct. Johannes [1] https://github.com/r-lib/svglite/issues/71 [2] https://github.com/r-lib/vdiffr/issues/103 > with > R > 4.0 (i.e. R-devel) where the reference files were generated with R <= > 4.0. This is described in > > https://github.com/r-lib/vdiffr/issues/86 > > However the vdiffr tests are only run if you set the NOT_CRAN environment > variable, for example because you use devtools for running tests, see > > https://github.com/r-lib/vdiffr#testing-versus-monitoring > > Kind regards, > > Johannes > > > 2. Over a dozen have a latex failure of > > ! pdfTeX error (\pdfsetmatrix): Unrecognized format.. > > \AtBegShi@Output ...ipout \box \AtBeginShipoutBox > > > >\fi \fi > > > > A check of kpsewhich shows I have all the packages, and I don't see a > > pattern in the .tex files at the point of failure. > > > > Terry T. > > __ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel -- Johannes Ranke Wissenschaftlicher Berater 07624 8099027 https://jrwb.de [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] reverse dependency checks
Am Donnerstag, 18. Februar 2021, 19:58:09 CET schrieb Therneau, Terry M., Ph.D. via R-devel: > There are some nice tools to automate reverse dependency checks, but for a > large package the real issue is the envirionment. The description of the > crandalf site on github has a nice summary. One package uses a cryto > libraries (oops, install those), another uses some latex macros I've never > heard of, etc.In any case, I am seeing some failures in my reverse > checks for survival that I'm not sure how to fix. If anyone has a hint or > two I'd be grateful. > > 1. A half dozen fail with "graphics API mismatch" Such error messages could occur if visual diffs (of SVG plots) are run with R > 4.0 (i.e. R-devel) where the reference files were generated with R <= 4.0. This is described in https://github.com/r-lib/vdiffr/issues/86 However the vdiffr tests are only run if you set the NOT_CRAN environment variable, for example because you use devtools for running tests, see https://github.com/r-lib/vdiffr#testing-versus-monitoring Kind regards, Johannes > > 2. Over a dozen have a latex failure of > ! pdfTeX error (\pdfsetmatrix): Unrecognized format.. > \AtBegShi@Output ...ipout \box \AtBeginShipoutBox >\fi \fi > > A check of kpsewhich shows I have all the packages, and I don't see a > pattern in the .tex files at the point of failure. > > Terry T. __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] reverse dependency checks
On Tue, 3 Sep 2019 at 14:53, Therneau, Terry M., Ph.D. via R-devel wrote: > > I remember there was advice about a server that one could use for reverse > dependency > checks, but I forgot to write it down. (Or I did save the info and forgot > where I saved > it...) I have been doing the checks for survival myself, but the count is > getting out of > hand (663, not counting bioconductor). > > Any pointers? You could try Yihui's crandalf [1]. Locally, I don't know what you are using, but there are a few alternatives. Notably, Dirk's prrd [2] (the only one that I tried myself and I can thus recommend), Gabor's revdepcheck [3] and R's brand new tools::check_packages_in_dir(). [1] https://github.com/yihui/crandalf [2] https://github.com/eddelbuettel/prrd [3] https://github.com/r-lib/revdepcheck Iñaki __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] reverse dependency checks
https://builder.r-hub.io/ El martes, 3 de septiembre de 2019, Therneau, Terry M., Ph.D. via R-devel < r-devel@r-project.org> escribió: > I remember there was advice about a server that one could use for reverse > dependency > checks, but I forgot to write it down. (Or I did save the info and forgot > where I saved > it...) I have been doing the checks for survival myself, but the count > is getting out of > hand (663, not counting bioconductor). > > Any pointers? > > Terry Therneau > > > [[alternative HTML version deleted]] > > __ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel
